Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3647 Salvia bowleyana HOM05D005699 ORTHO05D007496 6.5e-146 520.8 275 100.0
Oeu010029.1 Olea europaea HOM05D005699 ORTHO05D007496 1.4e-116 423.3 264 81.8
Dinv13365 Davidia involucrata HOM05D005699 ORTHO05D007496 1.7e-114 416.4 264 81.4
Hma1.2p1_0050F.1_g028850 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 2.2e-114 416.0 266 80.1
Nitab4.5_0000347g0060 Nicotiana tabacum HOM05D005699 ORTHO05D007496 1.1e-113 413.7 264 81.1
Solyc07g062180.4 Solanum lycopersicum HOM05D005699 ORTHO05D007496 9.4e-113 410.6 264 81.4
Migut.M00694 Erythranthe guttata HOM05D005699 ORTHO05D007496 8.0e-112 407.5 262 79.0
Peaxi162Scf00111g01334 Petunia axillaris HOM05D005699 ORTHO05D007496 4.0e-111 405.2 264 80.7
Atru.chr2.2008 Acer truncatum HOM05D005699 ORTHO05D007496 5.2e-111 404.8 259 79.5
Ciclev10021126m.g Citrus clementina HOM05D005699 ORTHO05D007496 5.2e-111 404.8 259 79.9
Cc05_g10740 Coffea canephora HOM05D005699 ORTHO05D007496 5.2e-111 404.8 272 78.3
CSS0029451 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 6.8e-111 404.4 269 77.7
Prupe.4G156800 Prunus persica HOM05D005699 ORTHO05D007496 1.5e-110 403.3 271 76.4
SGA_v2.0_scaffold73G24389 Striga asiatica HOM05D005699 ORTHO05D007496 2.0e-110 402.9 291 73.5
MSTRG.14252 Avicennia marina HOM05D005699 ORTHO05D007496 2.6e-110 402.5 270 78.9
HanXRQChr14g0439361 Helianthus annuus HOM05D005699 ORTHO05D007496 2.6e-110 402.5 265 78.1
MD03G1247900 Malus domestica HOM05D005699 ORTHO05D007496 9.8e-110 400.6 271 76.0
MSTRG.6687 Avicennia marina HOM05D005699 ORTHO05D007496 1.3e-109 400.2 265 78.5
EL10Ac4g08415 Beta vulgaris HOM05D005699 ORTHO05D007496 1.7e-109 399.8 266 75.9
Cfa019514 Carpinus fangiana HOM05D005699 ORTHO05D007496 1.7e-109 399.8 259 77.6
TAR629G2232 Trochodendron aralioides HOM05D005699 ORTHO05D007496 2.2e-109 399.4 266 76.3
CAN.G375.48 Capsicum annuum HOM05D005699 ORTHO05D007496 2.8e-109 399.1 258 79.5
PSO541G1284 Papaver somniferum HOM05D005699 ORTHO05D007496 2.8e-109 399.1 267 75.3
Gohir.D11G303400 Gossypium hirsutum HOM05D005699 ORTHO05D007496 3.7e-109 398.7 262 78.6
Potri.001G384300 Populus trichocarpa HOM05D005699 ORTHO05D007496 3.7e-109 398.7 258 79.1
CSS0007542 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 6.3e-109 397.9 270 76.3
Gorai.007G331300 Gossypium raimondii HOM05D005699 ORTHO05D007496 8.3e-109 397.5 262 78.2
Manes.15G097700 Manihot esculenta HOM05D005699 ORTHO05D007496 8.3e-109 397.5 259 77.2
Thecc.07G132200 Theobroma cacao HOM05D005699 ORTHO05D007496 8.3e-109 397.5 260 78.5
Cpa.g.sc77.58 Carica papaya HOM05D005699 ORTHO05D007496 1.1e-108 397.1 259 78.4
DCAR_013779 Daucus carota HOM05D005699 ORTHO05D007496 1.1e-108 397.1 266 75.6
Gohir.A11G289100 Gossypium hirsutum HOM05D005699 ORTHO05D007496 1.1e-108 397.1 262 78.6
Actinidia12601 Actinidia chinensis HOM05D005699 ORTHO05D007496 1.4e-108 396.7 269 75.5
ECA240G3195 Erigeron canadensis HOM05D005699 ORTHO05D007496 1.4e-108 396.7 260 76.5
RcHm_v2.0_Chr5g0029561 Rosa chinensis HOM05D005699 ORTHO05D007496 1.4e-108 396.7 252 79.4
MD11G1269700 Malus domestica HOM05D005699 ORTHO05D007496 2.4e-108 396.0 271 74.5
COL.COLO4_17478 Corchorus olitorius HOM05D005699 ORTHO05D007496 3.1e-108 395.6 258 77.1
TWI39G0441 Tripterygium wilfordii HOM05D005699 ORTHO05D007496 3.1e-108 395.6 262 74.4
Lj8A146G72 Lonicera japonica HOM05D005699 ORTHO05D007496 4.1e-108 395.2 258 78.7
FAN11G1539 Fragaria x ananassa HOM05D005699 ORTHO05D007496 5.4e-108 394.8 259 76.8
Potri.011G105700 Populus trichocarpa HOM05D005699 ORTHO05D007496 9.1e-108 394.0 258 77.5
Sabra11G0080500 Salix brachista HOM05D005699 ORTHO05D007496 9.1e-108 394.0 250 81.2
Glyma.12G233800 Glycine max HOM05D005699 ORTHO05D007496 1.6e-107 393.3 249 79.9
FAN25G0494 Fragaria x ananassa HOM05D005699 ORTHO05D007496 2.0e-107 392.9 259 76.4
Nn3g21006 Nelumbo nucifera HOM05D005699 ORTHO05D007496 2.0e-107 392.9 257 79.0
FAN16G3421 Fragaria x ananassa HOM05D005699 ORTHO05D007496 2.7e-107 392.5 259 76.4
FAN21G2533 Fragaria x ananassa HOM05D005699 ORTHO05D007496 3.5e-107 392.1 259 76.1
GSVIVG01014100001 Vitis vinifera HOM05D005699 ORTHO05D007496 3.5e-107 392.1 256 78.5
Nitab4.5_0003230g0020 Nicotiana tabacum HOM05D005699 ORTHO05D007496 4.5e-107 391.7 306 69.9
PGR083G0120 Punica granatum HOM05D005699 ORTHO05D007496 5.9e-107 391.3 259 76.1
Lj1A824T64 Lonicera japonica HOM05D005699 ORTHO05D007496 7.7e-107 391.0 267 77.2
Glyma.13G265200 Glycine max HOM05D005699 ORTHO05D007496 1.7e-106 389.8 249 79.1
Aqoxy1G01911 Aquilegia oxysepala HOM05D005699 ORTHO05D007496 2.3e-106 389.4 252 78.2
CiPaw.12G110500 Carya illinoinensis HOM05D005699 ORTHO05D007496 2.3e-106 389.4 259 75.7
HanXRQChr13g0389711 Helianthus annuus HOM05D005699 ORTHO05D007496 2.9e-106 389.0 270 73.7
arahy.Tifrunner.gnm1.ann1.EKI9R8 Arachis hypogaea HOM05D005699 ORTHO05D007496 3.8e-106 388.7 249 79.5
Eucgr.F01366 Eucalyptus grandis HOM05D005699 ORTHO05D007496 8.6e-106 387.5 271 73.1
Phvul.005G076800 Phaseolus vulgaris HOM05D005699 ORTHO05D007496 2.5e-105 386.0 252 77.4
Ah.04g164050 Amaranthus hybridus HOM05D005699 ORTHO05D007496 3.3e-105 385.6 267 73.0
CsaV3_4G008250 Cucumis sativus L. HOM05D005699 ORTHO05D007496 3.3e-105 385.6 258 76.7
Sed0019309 Sechium edule HOM05D005699 ORTHO05D007496 4.2e-105 385.2 259 75.3
Ca_03931_v3 Cicer arietinum L. HOM05D005699 ORTHO05D007496 9.5e-105 384.0 249 76.3
Haze_09244 Corylus avellana HOM05D005699 ORTHO05D007496 1.2e-104 383.6 259 75.3
AUR62019646 Chenopodium quinoa HOM05D005699 ORTHO05D007496 1.6e-104 383.3 264 75.0
Lj3g0018973 Lotus japonicus HOM05D005699 ORTHO05D007496 2.8e-104 382.5 249 77.1
Carub.0002s2547 Capsella rubella HOM05D005699 ORTHO05D007496 4.7e-104 381.7 260 74.2
AT1G78620 Arabidopsis thaliana HOM05D005699 ORTHO05D007496 8.0e-104 380.9 260 74.2
CARHR072140 Cardamine hirsuta HOM05D005699 ORTHO05D007496 8.0e-104 380.9 271 72.0
Aa31LG4G2340 Aethionema arabicum HOM05D005699 ORTHO05D007496 1.0e-103 380.6 260 74.2
DCAR_019613 Daucus carota HOM05D005699 ORTHO05D007496 1.0e-103 380.6 258 76.7
MBI06_g08519_MAGBIO Magnolia biondii HOM05D005699 ORTHO05D007496 1.0e-103 380.6 268 73.1
AL2G39020 Arabidopsis lyrata HOM05D005699 ORTHO05D007496 1.4e-103 380.2 260 74.2
Lalb_Chr20g0109131 Lupinus albus HOM05D005699 ORTHO05D007496 1.4e-103 380.2 252 76.2
VMungo1080G0954 Vigna mungo HOM05D005699 ORTHO05D007496 1.4e-103 380.2 252 75.8
Rhsim06G0211500 Rhododendron simsii HOM05D005699 ORTHO05D007496 1.8e-103 379.8 268 74.3
BcaC08g47425 Brassica carinata HOM05D005699 ORTHO05D007496 2.3e-103 379.4 260 73.8
Sp5g33710 Schrenkiella parvula HOM05D005699 ORTHO05D007496 3.0e-103 379.0 260 73.5
THA.LOC104813995 Tarenaya hassleriana HOM05D005699 ORTHO05D007496 3.0e-103 379.0 259 73.4
A07p43890 Brassica napus HOM05D005699 ORTHO05D007496 5.2e-103 378.3 260 73.5
CSS0028539 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 8.9e-103 377.5 289 70.6
Thhalv10018838m.g Eutrema salsugineum HOM05D005699 ORTHO05D007496 8.9e-103 377.5 260 73.5
PGSC0003DMG400007091 Solanum tuberosum HOM05D005699 ORTHO05D007496 8.9e-103 377.5 323 65.3
Medtr2g073380 Medicago truncatula HOM05D005699 ORTHO05D007496 1.2e-102 377.1 286 67.5
BraA07t31896Z Brassica rapa HOM05D005699 ORTHO05D007496 2.6e-102 375.9 260 73.1
AUR62039586 Chenopodium quinoa HOM05D005699 ORTHO05D007496 3.4e-102 375.6 264 73.5
C06p52520 Brassica napus HOM05D005699 ORTHO05D007496 9.8e-102 374.0 260 72.7
BcaC08g47427 Brassica carinata HOM05D005699 ORTHO05D007496 3.7e-101 372.1 260 72.3
BolC6t40271H Brassica oleracea HOM05D005699 ORTHO05D007496 9.2e-100 367.5 270 70.4
Os01g0729100 Oryza sativa ssp. japonica HOM05D005699 ORTHO05D007496 1.7e-98 363.2 252 73.0
ClCG07G010100 Citrullus lanatus HOM05D005699 ORTHO05D007496 1.5e-97 360.1 322 62.1
Psat5g233280 Pisum sativum HOM05D005699 ORTHO05D007496 1.9e-97 359.8 249 71.5
unitig_37.g12557 Utricularia gibba HOM05D005699 ORTHO05D007496 9.5e-97 357.5 255 70.6
Sabra11G0074900 Salix brachista HOM05D005699 ORTHO05D007496 2.1e-96 356.3 234 77.4
SalBow4G2873 Salvia bowleyana HOM05D005699 ORTHO05D007496 4.0e-95 352.1 238 74.8
Lsat_1_v5_gn_9_100441 Lactuca sativa HOM05D005699 ORTHO05D007496 2.0e-94 349.7 237 75.5
unitig_746.g26834 Utricularia gibba HOM05D005699 ORTHO05D007496 1.3e-93 347.1 255 67.8
QL08p037175 Quercus lobata HOM05D005699 ORTHO05D007496 2.9e-93 345.9 224 79.0
QL08p037250 Quercus lobata HOM05D005699 ORTHO05D007496 2.9e-93 345.9 224 79.0
ATR0213G027 Amborella trichopoda HOM05D005699 ORTHO05D007496 8.6e-90 334.3 244 69.7
TPR.G13095 Trifolium pratense HOM05D005699 ORTHO05D007496 1.5e-86 323.6 399 48.1
Hma1.2p1_0050F.1_g028840 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 1.7e-85 320.1 202 81.7
Manes.03G092700 Manihot esculenta HOM05D005699 ORTHO05D007496 5.1e-82 308.5 212 75.5
FvH4_3g17770 Fragaria vesca HOM05D005699 ORTHO05D007496 1.6e-80 303.5 200 76.5
Pp3c13_15320 Physcomitrium patens HOM05D005699 ORTHO05D007496 3.1e-79 299.3 256 60.9
AagrBONN_evm.TU.Sc2ySwM_228.4605 Anthoceros agrestis HOM05D005699 ORTHO05D007496 4.0e-79 298.9 239 60.3
MELO3C016111.2 Cucumis melo HOM05D005699 ORTHO05D007496 4.4e-78 295.4 188 80.9
Sc16g0007730 Simmondsia chinensis HOM05D005699 ORTHO05D007496 8.4e-77 291.2 193 77.2
CBR_g26242 Chara braunii HOM05D005699 ORTHO05D007496 1.1e-76 290.8 250 56.8
CiPaw.11G155600 Carya illinoinensis HOM05D005699 ORTHO05D007496 3.5e-75 285.8 188 77.1
Sopen07g030460 Solanum pennellii HOM05D005699 ORTHO05D007496 1.3e-74 283.9 179 81.0
Mapoly0056s0015 Marchantia polymorpha HOM05D005699 ORTHO05D007496 1.7e-74 283.5 247 54.3
CDE02G0824 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 1.1e-73 280.8 235 64.7
SMO331G0093 Selaginella moellendorffii HOM05D005699 ORTHO05D007496 4.3e-73 278.9 252 57.1
SHI27569 Sapria himalayana HOM05D005699 ORTHO05D007496 7.6e-70 268.1 288 52.8
Pp3c13_3550 Physcomitrium patens HOM05D005699 ORTHO05D007496 4.2e-68 262.3 255 53.7
Actinidia37024 Actinidia chinensis HOM05D005699 ORTHO05D007496 2.9e-61 239.6 164 76.2
vmacro11968 Vaccinium macrocarpon HOM05D005699 ORTHO05D007496 6.2e-56 221.9 224 60.3
MCO15G637 Micromonas commoda HOM05D005699 ORTHO05D007496 5.8e-54 215.3 256 45.7
Zm00001eb361870 Zea mays HOM05D005699 ORTHO05D007496 7.6e-54 214.9 146 74.7
Cre06.g294800 Chlamydomonas reinhardtii HOM05D005699 ORTHO05D007496 4.9e-53 212.2 237 48.5
SEGI_05295 Sequoiadendron giganteum HOM05D005699 ORTHO05D007496 8.4e-53 211.5 169 63.9
CDE06G0498 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 7.9e-51 204.9 268 46.6
HPP92_006376 Vanilla planifolia HOM05D005699 ORTHO05D007496 2.9e-45 186.4 162 62.3
PRCOL_00000954 Prasinoderma coloniale HOM05D005699 ORTHO05D007496 2.5e-44 183.3 267 41.9
Medtr7g055620 Medicago truncatula HOM05D005699 ORTHO05D007496 3.0e-26 123.2 87 73.6
Thecc.07G131400 Theobroma cacao HOM05D005699 ORTHO05D007496 4.5e-22 109.4 74 74.3
Thecc.07G131900 Theobroma cacao HOM05D005699 ORTHO05D007496 6.5e-21 105.5 87 65.5
Thecc.07G131100 Theobroma cacao HOM05D005699 ORTHO05D007496 1.6e-19 100.9 74 70.3
MELO3C029615.2 Cucumis melo HOM05D005699 ORTHO05D170539 7.4e-17 92.0 72 69.4
MELO3C032042.2 Cucumis melo HOM05D005699 ORTHO05D000044 1.4e-15 87.8 53 86.8
SEGI_06384 Sequoiadendron giganteum HOM05D005699 ORTHO05D007496 2.2e-13 80.5 63 61.9
FvH4_7g00710 Fragaria vesca HOM05D005699 ORTHO05D046157 2.2e-08 63.9 48 58.3
FAN10G4235 Fragaria x ananassa HOM05D030717 ORTHO05D046157 2.4e-07 60.5 83 41.0
Actinidia39422 Actinidia chinensis HOM05D005699 ORTHO05D056065 3.1e-07 60.1 42 69.0
FAN06G4357 Fragaria x ananassa HOM05D023873 ORTHO05D007496 3.1e-07 60.1 40 65.0
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 2.7e-06 57.0 210 29.5


User provided reference genes

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