Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3592 Salvia bowleyana HOM05D006220 ORTHO05D007590 2.6e-225 785.8 650 100.0
SGA_v2.0_scaffold9G04934 Striga asiatica HOM05D006220 ORTHO05D007590 1.7e-83 314.7 578 64.9
Lsat_1_v5_gn_9_97140 Lactuca sativa HOM05D006220 ORTHO05D007590 7.5e-76 289.3 499 60.1
CsaV3_3G006190 Cucumis sativus L. HOM05D006220 ORTHO05D007590 9.8e-76 288.9 558 66.7
Migut.H01927 Erythranthe guttata HOM05D006220 ORTHO05D007590 9.8e-76 288.9 561 66.1
MSTRG.14365 Avicennia marina HOM05D006220 ORTHO05D007590 5.4e-74 283.1 561 63.5
Cfa020552 Carpinus fangiana HOM05D006220 ORTHO05D007590 9.2e-74 282.3 558 58.1
CSS0010017 Camellia sinensis var. sinensis HOM05D006220 ORTHO05D007590 1.0e-72 278.9 558 61.5
MELO3C016523.2 Cucumis melo HOM05D006220 ORTHO05D007590 1.3e-72 278.5 558 65.2
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 1.2e-70 271.9 558 60.9
AUR62029364 Chenopodium quinoa HOM05D006220 ORTHO05D007590 8.0e-70 269.2 602 44.9
HanXRQChr03g0078511 Helianthus annuus HOM05D006220 ORTHO05D007590 2.3e-69 267.7 558 55.4
Thecc.07G079000 Theobroma cacao HOM05D006220 ORTHO05D007590 3.1e-69 267.3 582 57.9
Sed0021838 Sechium edule HOM05D006220 ORTHO05D007590 1.5e-68 265.0 561 62.7
Nitab4.5_0001320g0170 Nicotiana tabacum HOM05D006220 ORTHO05D007590 2.6e-68 264.2 370 68.4
Nitab4.5_0000207g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 5.8e-68 263.1 618 45.5
Gohir.A13G145200 Gossypium hirsutum HOM05D006220 ORTHO05D007590 3.7e-67 260.4 561 56.0
Oeu008016.1 Olea europaea HOM05D006220 ORTHO05D007590 4.9e-67 260.0 289 65.4
Prupe.4G184800 Prunus persica HOM05D006220 ORTHO05D007590 4.9e-67 260.0 558 54.7
Gorai.013G167800 Gossypium raimondii HOM05D006220 ORTHO05D007590 1.4e-66 258.5 561 58.6
TWI38G2391 Tripterygium wilfordii HOM05D006220 ORTHO05D007590 9.2e-66 255.8 558 59.9
Gohir.D13G150000 Gossypium hirsutum HOM05D006220 ORTHO05D007590 2.0e-65 254.6 561 58.3
PGR031G1387 Punica granatum HOM05D006220 ORTHO05D007590 2.7e-65 254.2 561 59.5
RcHm_v2.0_Chr5g0034391 Rosa chinensis HOM05D006220 ORTHO05D007590 3.0e-64 250.8 558 58.2
Sp3g13670 Schrenkiella parvula HOM05D006220 ORTHO05D007590 6.6e-64 249.6 560 55.4
Thhalv10020366m.g Eutrema salsugineum HOM05D006220 ORTHO05D007590 4.3e-63 246.9 560 59.8
ECA240G2314 Erigeron canadensis HOM05D006220 ORTHO05D007590 7.3e-63 246.1 558 58.4
AL3G27960 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 9.5e-63 245.7 558 58.2
BcaC05g29008 Brassica carinata HOM05D006220 ORTHO05D007590 9.5e-63 245.7 567 59.6
BcaB06g29573 Brassica carinata HOM05D006220 ORTHO05D007590 1.2e-62 245.4 560 59.3
THA.LOC104810484 Tarenaya hassleriana HOM05D006220 ORTHO05D007590 2.1e-62 244.6 558 60.2
Cc05_g12250 Coffea canephora HOM05D006220 ORTHO05D007590 2.8e-62 244.2 561 57.9
AT3G15410 Arabidopsis thaliana HOM05D006220 ORTHO05D007590 6.2e-62 243.0 558 58.4
Hund22942 Selenicereus undatus HOM05D006220 ORTHO05D007590 6.2e-62 243.0 558 55.7
DCAR_017149 Daucus carota HOM05D006220 ORTHO05D007590 5.2e-61 240.0 515 57.7
GSVIVG01014371001 Vitis vinifera HOM05D006220 ORTHO05D007590 6.8e-61 239.6 558 56.6
COL.COLO4_09426 Corchorus olitorius HOM05D006220 ORTHO05D007590 7.5e-60 236.1 561 56.5
A05p33990 Brassica napus HOM05D006220 ORTHO05D007590 1.3e-59 235.3 564 57.3
CAN.G1110.52 Capsicum annuum HOM05D006220 ORTHO05D007590 2.2e-59 234.6 558 55.9
ClCG10G006830 Citrullus lanatus HOM05D006220 ORTHO05D007590 2.9e-59 234.2 537 58.3
AUR62034280 Chenopodium quinoa HOM05D006220 ORTHO05D007590 4.9e-59 233.4 576 49.1
BolC5t33860H Brassica oleracea HOM05D006220 ORTHO05D007590 1.1e-58 232.3 566 59.2
Carub.0003s1514 Capsella rubella HOM05D006220 ORTHO05D007590 1.1e-58 232.3 558 57.7
CARHR090460 Cardamine hirsuta HOM05D006220 ORTHO05D007590 1.9e-58 231.5 558 58.4
BraA05t22221Z Brassica rapa HOM05D006220 ORTHO05D007590 9.2e-58 229.2 566 57.6
unitig_26.g9535 Utricularia gibba HOM05D006220 ORTHO05D007590 1.6e-57 228.4 534 41.8
Duzib213G0302 Durio zibethinus HOM05D006220 ORTHO05D007590 2.7e-57 227.6 503 56.1
Sc16g0006920 Simmondsia chinensis HOM05D006220 ORTHO05D007590 7.8e-57 226.1 512 58.2
Zm00001eb259320 Zea mays HOM05D006220 ORTHO05D007590 1.0e-56 225.7 561 56.1
Solyc10g006930.4 Solanum lycopersicum HOM05D006220 ORTHO05D007590 1.3e-56 225.3 569 52.5
Os02g0826600 Oryza sativa ssp. japonica HOM05D006220 ORTHO05D007590 2.3e-56 224.6 583 51.1
Sopen10g002840 Solanum pennellii HOM05D006220 ORTHO05D007590 1.9e-55 221.5 558 55.0
Eucgr.F03334 Eucalyptus grandis HOM05D006220 ORTHO05D007590 9.5e-55 219.2 565 60.0
Hma1.2p1_0148F.1_g066170 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 4.7e-54 216.9 234 63.2
TAR626G0245 Trochodendron aralioides HOM05D006220 ORTHO05D007590 4.7e-54 216.9 563 55.8
HPP92_022050 Vanilla planifolia HOM05D006220 ORTHO05D007590 4.7e-54 216.9 561 53.7
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis HOM05D006220 ORTHO05D007590 1.8e-53 214.9 565 57.0
Peaxi162Scf00027g02813 Petunia axillaris HOM05D006220 ORTHO05D007590 5.2e-53 213.4 289 65.7
Actinidia05212 Actinidia chinensis HOM05D006220 ORTHO05D007590 1.9e-50 204.9 561 55.1
MD00G1090000 Malus domestica HOM05D006220 ORTHO05D007590 4.1e-50 203.8 580 49.0
MD11G1243700 Malus domestica HOM05D006220 ORTHO05D007590 4.1e-50 203.8 552 48.2
EL10Ac4g08136 Beta vulgaris HOM05D006220 ORTHO05D007590 5.4e-50 203.4 553 57.5
Glyma.12G222700 Glycine max HOM05D006220 ORTHO05D007590 1.6e-49 201.8 559 58.0
Ciclev10007835m.g Citrus clementina HOM05D006220 ORTHO05D007590 2.1e-49 201.4 558 58.1
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea HOM05D006220 ORTHO05D007590 1.3e-48 198.7 564 49.5
Lalb_Chr20g0109761 Lupinus albus HOM05D006220 ORTHO05D007590 1.7e-48 198.4 558 53.8
Manes.03G112900 Manihot esculenta HOM05D006220 ORTHO05D007590 6.6e-48 196.4 558 52.2
Aa31LG8G2650 Aethionema arabicum HOM05D006220 ORTHO05D007590 1.1e-47 195.7 618 48.7
Aqoxy4G01032 Aquilegia oxysepala HOM05D006220 ORTHO05D007590 4.3e-47 193.7 559 55.6
C05p51740 Brassica napus HOM05D006220 ORTHO05D007590 3.6e-46 190.7 294 57.8
Cpa.g.sc80.40 Carica papaya HOM05D006220 ORTHO05D007590 1.5e-44 185.3 566 47.9
FAN25G1684 Fragaria x ananassa HOM05D006220 ORTHO05D007590 1.7e-43 181.8 559 53.5
Atru.chr2.2718 Acer truncatum HOM05D006220 ORTHO05D007590 4.9e-43 180.3 558 54.3
FAN11G1997 Fragaria x ananassa HOM05D006220 ORTHO05D007590 5.4e-42 176.8 573 52.2
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea HOM05D006220 ORTHO05D007590 7.1e-42 176.4 564 47.9
MBI17_g46353_MAGBIO Magnolia biondii HOM05D006220 ORTHO05D007590 4.6e-41 173.7 289 54.0
Lj3g0017554 Lotus japonicus HOM05D006220 ORTHO05D007590 6.0e-41 173.3 558 51.3
PSO210G4054 Papaver somniferum HOM05D006220 ORTHO05D007590 7.8e-41 172.9 558 53.0
CiPaw.11G172800 Carya illinoinensis HOM05D006220 ORTHO05D007590 2.3e-40 171.4 444 57.0
Sabra11G0107700 Salix brachista HOM05D006220 ORTHO05D007590 2.3e-40 171.4 658 50.3
CDE05G0932 Ceratophyllum demersum HOM05D006220 ORTHO05D007590 3.9e-40 170.6 560 53.2
Rhsim06G0196800 Rhododendron simsii HOM05D006220 ORTHO05D007590 1.5e-39 168.7 580 50.9
CANSAT56G4311 Cannabis sativa HOM05D006220 ORTHO05D007590 2.5e-39 167.9 561 48.0
VMungo1080G0525 Vigna mungo HOM05D006220 ORTHO05D007590 7.3e-39 166.4 567 51.9
Mapoly0029s0091 Marchantia polymorpha HOM05D006220 ORTHO05D007590 3.6e-38 164.1 567 51.7
Glyma.13G278800 Glycine max HOM05D006220 ORTHO05D007590 6.2e-38 163.3 558 51.3
Haze_09468 Corylus avellana HOM05D006220 ORTHO05D007590 9.0e-37 159.5 199 56.8
Dinv08311 Davidia involucrata HOM05D006220 ORTHO05D007590 1.2e-36 159.1 289 51.6
FvH4_3g20490 Fragaria vesca HOM05D006220 ORTHO05D007590 4.4e-36 157.1 559 51.7
Potri.011G121700 Populus trichocarpa HOM05D006220 ORTHO05D007590 4.4e-36 157.1 558 52.7
TPR.G38952 Trifolium pratense HOM05D006220 ORTHO05D007590 5.8e-36 156.8 583 43.9
FAN16G3027 Fragaria x ananassa HOM05D006220 ORTHO05D007590 3.8e-35 154.1 559 51.3
Nn1g06599 Nelumbo nucifera HOM05D006220 ORTHO05D007590 4.9e-35 153.7 603 48.9
vmacro11856 Vaccinium macrocarpon HOM05D006220 ORTHO05D007590 1.6e-33 148.7 608 44.6
Phvul.005G083000 Phaseolus vulgaris HOM05D006220 ORTHO05D007590 2.1e-33 148.3 561 52.6
Psat5g245040 Pisum sativum HOM05D006220 ORTHO05D007590 1.7e-32 145.2 559 50.8
Medtr2g079560 Medicago truncatula HOM05D006220 ORTHO05D007590 1.6e-30 138.7 567 49.7
Pp3c6_15930 Physcomitrium patens HOM05D006220 ORTHO05D007590 1.1e-29 136.0 570 44.6
PSO832G1845 Papaver somniferum HOM05D006220 ORTHO05D007590 9.0e-29 132.9 558 50.2
ATR0680G100 Amborella trichopoda HOM05D006220 ORTHO05D007590 2.6e-28 131.3 560 50.7
MD11G1243500 Malus domestica HOM05D006220 ORTHO05D007590 7.6e-28 129.8 206 49.0
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 2.4e-26 124.8 150 44.7
Lj1A847G19 Lonicera japonica HOM05D006220 ORTHO05D007590 6.0e-25 120.2 289 42.2
SMO200G0168 Selaginella moellendorffii HOM05D006220 ORTHO05D007590 2.3e-24 118.2 567 48.5
Sabra11G0106700 Salix brachista HOM05D006220 ORTHO05D007590 1.5e-23 115.5 72 79.2
Sabra11G0107000 Salix brachista HOM05D006220 ORTHO05D007590 1.5e-23 115.5 72 79.2
Sabra11G0105900 Salix brachista HOM05D006220 ORTHO05D007590 4.3e-23 114.0 72 77.8
Sabra11G0105600 Salix brachista HOM05D006220 ORTHO05D007590 9.6e-23 112.8 72 77.8
arahy.Tifrunner.gnm1.ann1.XCJ8AH Arachis hypogaea HOM05D006220 ORTHO05D007590 3.1e-21 107.8 200 49.5
HPP92_027622 Vanilla planifolia HOM05D006220 ORTHO05D007590 1.3e-19 102.4 72 69.4
Nitab4.5_0001320g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 1.7e-19 102.1 95 61.1
Gohir.1Z049312 Gossypium hirsutum HOM05D006220 ORTHO05D007590 2.9e-19 101.3 121 54.5
CBR_g29878 Chara braunii HOM05D006220 ORTHO05D007590 1.4e-18 99.0 250 29.6
Cc05_g12270 Coffea canephora HOM05D006220 ORTHO05D007590 5.1e-16 90.5 120 63.3
Cc05_g12290 Coffea canephora HOM05D006220 ORTHO05D007590 5.1e-16 90.5 120 63.3
Cc05_g12300 Coffea canephora HOM05D006220 ORTHO05D007590 5.1e-16 90.5 120 63.3
Haze_09464 Corylus avellana HOM05D006220 ORTHO05D007590 2.8e-14 84.7 52 76.9
HanXRQChr09g0260971 Helianthus annuus HOM05D006220 ORTHO05D007590 2.8e-14 84.7 59 69.5
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 8.2e-14 83.2 69 53.6
Lsat_1_v5_gn_9_85500 Lactuca sativa HOM05D006220 ORTHO05D007590 1.9e-10 72.0 181 32.0
Thecc.07G078400 Theobroma cacao HOM05D006220 ORTHO05D007590 1.6e-06 58.9 77 76.6


User provided reference genes

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