Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3495 Salvia bowleyana HOM05D007332 ORTHO05D009297 1.8e-78 295.8 145 100.0
MSTRG.1422 Avicennia marina HOM05D007332 ORTHO05D009297 4.9e-36 154.8 187 54.0
Atru.chr13.1537 Acer truncatum HOM05D007332 ORTHO05D009297 8.7e-33 144.1 185 49.7
Ciclev10002610m.g Citrus clementina HOM05D007332 ORTHO05D009297 1.3e-28 130.2 188 44.7
Cfa018560 Carpinus fangiana HOM05D007332 ORTHO05D009297 2.2e-28 129.4 184 47.8
CAN.G1486.2 Capsicum annuum HOM05D007332 ORTHO05D009297 1.4e-27 126.7 187 44.4
PGSC0003DMG400006046 Solanum tuberosum HOM05D007332 ORTHO05D009297 2.4e-27 125.9 153 52.3
CiPaw.15G033700 Carya illinoinensis HOM05D007332 ORTHO05D009297 4.2e-27 125.2 194 43.8
Cc10_g12430 Coffea canephora HOM05D007332 ORTHO05D009297 4.2e-27 125.2 213 42.3
Lj1g0005314 Lotus japonicus HOM05D007332 ORTHO05D009297 4.2e-27 125.2 171 49.7
SGA_v2.0_scaffold52G18934 Striga asiatica HOM05D007332 ORTHO05D009297 4.2e-27 125.2 180 46.1
TWI34G0633 Tripterygium wilfordii HOM05D007332 ORTHO05D009297 5.5e-27 124.8 192 46.9
Manes.02G166600 Manihot esculenta HOM05D007332 ORTHO05D009297 7.1e-27 124.4 192 45.8
QL09p033201 Quercus lobata HOM05D007332 ORTHO05D009297 1.2e-26 123.6 196 43.9
Hma1.2p1_0542F.1_g174970 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 2.1e-26 122.9 190 44.7
Peaxi162Scf00310g00043 Petunia axillaris HOM05D007332 ORTHO05D009297 7.9e-26 120.9 190 44.2
Potri.002G080200 Populus trichocarpa HOM05D007332 ORTHO05D009297 7.9e-26 120.9 216 41.2
Gorai.009G248200 Gossypium raimondii HOM05D007332 ORTHO05D009297 1.0e-25 120.6 201 42.8
PGSC0003DMG400024564 Solanum tuberosum HOM05D007332 ORTHO05D009297 1.3e-25 120.2 187 44.9
Gohir.A05G237300 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.8e-25 119.8 201 42.8
Sabra02G0062700 Salix brachista HOM05D007332 ORTHO05D009297 1.8e-25 119.8 181 45.9
COL.COLO4_03954 Corchorus olitorius HOM05D007332 ORTHO05D009297 6.7e-25 117.9 209 39.7
Solyc03g113480.1 Solanum lycopersicum HOM05D007332 ORTHO05D009297 6.7e-25 117.9 191 44.0
Migut.C01053 Erythranthe guttata HOM05D007332 ORTHO05D009297 8.7e-25 117.5 171 46.2
Sopen03g032530 Solanum pennellii HOM05D007332 ORTHO05D009297 8.7e-25 117.5 194 44.3
Gohir.D05G239400 Gossypium hirsutum HOM05D007332 ORTHO05D009297 1.5e-24 116.7 201 41.8
Duzib116G0046 Durio zibethinus HOM05D007332 ORTHO05D009297 9.6e-24 114.0 197 43.1
Nitab4.5_0000111g0100 Nicotiana tabacum HOM05D007332 ORTHO05D009297 1.3e-23 113.6 192 44.8
Nitab4.5_0006720g0020 Nicotiana tabacum HOM05D007332 ORTHO05D009297 2.1e-23 112.8 195 43.6
Dinv27272 Davidia involucrata HOM05D001470 ORTHO05D006430 2.8e-23 112.5 189 44.4
Potri.005G181200 Populus trichocarpa HOM05D007332 ORTHO05D009297 3.7e-23 112.1 195 42.6
Glyma.04G246900 Glycine max HOM05D007332 ORTHO05D009297 1.8e-22 109.8 172 47.1
MELO3C010504.2 Cucumis melo HOM05D007332 ORTHO05D009297 3.1e-22 109.0 176 43.8
Psat5g085840 Pisum sativum HOM05D007332 ORTHO05D009297 4.0e-22 108.6 172 45.3
VMungo1309G0081 Vigna mungo HOM05D007332 ORTHO05D009297 4.0e-22 108.6 169 46.2
Phvul.009G128000 Phaseolus vulgaris HOM05D007332 ORTHO05D009297 5.3e-22 108.2 168 45.8
Glyma.06G115900 Glycine max HOM05D007332 ORTHO05D009297 6.9e-22 107.8 169 46.2
Duzib093G1986 Durio zibethinus HOM05D007332 ORTHO05D009297 4.5e-21 105.1 202 40.1
FvH4_2g27560 Fragaria vesca HOM05D007332 ORTHO05D009297 4.5e-21 105.1 194 41.2
FAN24G1344 Fragaria x ananassa HOM05D007332 ORTHO05D009297 4.5e-21 105.1 192 41.7
TPR.G13457 Trifolium pratense HOM05D007332 ORTHO05D009297 1.7e-20 103.2 171 45.6
CSS0048102 Camellia sinensis var. sinensis HOM05D007332 ORTHO05D009297 6.5e-20 101.3 203 38.9
ClCG11G015900 Citrullus lanatus HOM05D007332 ORTHO05D009297 8.4e-20 100.9 172 41.9
FAN27G1631 Fragaria x ananassa HOM05D007332 ORTHO05D009297 8.4e-20 100.9 199 40.7
PGR044G1395 Punica granatum HOM05D007332 ORTHO05D009297 8.4e-20 100.9 202 38.6
arahy.Tifrunner.gnm1.ann1.ILK6IZ Arachis hypogaea HOM05D007332 ORTHO05D009297 1.4e-19 100.1 178 44.9
Eucgr.F04333 Eucalyptus grandis HOM05D007332 ORTHO05D009297 1.4e-19 100.1 205 38.0
Medtr3g088400 Medicago truncatula HOM05D007332 ORTHO05D009297 2.5e-19 99.4 177 45.2
RcHm_v2.0_Chr6g0296401 Rosa chinensis HOM05D007332 ORTHO05D009297 3.2e-19 99.0 191 40.3
DCAR_003566 Daucus carota HOM05D007332 ORTHO05D009297 1.6e-18 96.7 175 42.3
FAN20G0761 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.6e-18 96.7 192 39.6
TAR381G0705 Trochodendron aralioides HOM05D007332 ORTHO05D009297 2.7e-18 95.9 181 39.2
CsaV3_4G028070 Cucumis sativus L. HOM05D007332 ORTHO05D009297 7.9e-18 94.4 169 40.8
Hma1.2p1_0542F.1_g175020 Hydrangea macrophylla HOM05D007332 ORTHO05D009297 3.0e-17 92.4 156 42.9
Gohir.A06G046800 Gossypium hirsutum HOM05D007332 ORTHO05D009297 6.7e-17 91.3 165 43.6
ECA232G0093 Erigeron canadensis HOM05D007332 ORTHO05D009297 2.5e-16 89.4 176 38.6
Thecc.08G130400 Theobroma cacao HOM05D007332 ORTHO05D009297 2.5e-16 89.4 203 36.0
BcaB03g15951 Brassica carinata HOM05D007332 ORTHO05D009297 9.7e-16 87.4 232 34.1
Nn5g28415 Nelumbo nucifera HOM05D007332 ORTHO05D009297 2.2e-15 86.3 153 42.5
arahy.Tifrunner.gnm1.ann1.396V4Q Arachis hypogaea HOM05D007332 ORTHO05D009297 2.8e-15 85.9 154 45.5
THA.LOC104813672 Tarenaya hassleriana HOM05D007332 ORTHO05D009297 2.8e-15 85.9 221 34.8
Sabra05G0137200 Salix brachista HOM05D007332 ORTHO05D009297 3.7e-15 85.5 187 38.5
AT1G77400 Arabidopsis thaliana HOM05D007332 ORTHO05D009297 6.3e-15 84.7 228 32.9
BraA07t31813Z Brassica rapa HOM05D007332 ORTHO05D009297 6.3e-15 84.7 234 33.3
AL2G37600 Arabidopsis lyrata HOM05D007332 ORTHO05D009297 8.2e-15 84.3 228 33.3
C06p51540 Brassica napus HOM05D007332 ORTHO05D009297 8.2e-15 84.3 234 33.3
BolC6t40174H Brassica oleracea HOM05D007332 ORTHO05D009297 8.2e-15 84.3 234 33.3
Sp5g32550 Schrenkiella parvula HOM05D007332 ORTHO05D009297 1.4e-14 83.6 225 34.2
BcaC08g47610 Brassica carinata HOM05D007332 ORTHO05D009297 1.8e-14 83.2 206 36.9
A07p42920 Brassica napus HOM05D007332 ORTHO05D009297 1.8e-14 83.2 238 32.8
CARHR070880 Cardamine hirsuta HOM05D007332 ORTHO05D009297 3.1e-14 82.4 232 32.3
BcaB05g25043 Brassica carinata HOM05D007332 ORTHO05D009297 5.3e-14 81.6 230 33.9
arahy.Tifrunner.gnm1.ann1.34D5TH Arachis hypogaea HOM05D007332 ORTHO05D009297 9.0e-14 80.9 154 42.9
C02p17420 Brassica napus HOM05D007332 ORTHO05D009297 1.2e-13 80.5 211 35.1
BolC2t07856H Brassica oleracea HOM05D007332 ORTHO05D009297 1.2e-13 80.5 211 35.1
Gorai.010G052700 Gossypium raimondii HOM05D007332 ORTHO05D009297 1.2e-13 80.5 178 41.6
BcaC08g47611 Brassica carinata HOM05D007332 ORTHO05D009297 1.5e-13 80.1 231 32.5
Thhalv10019445m.g Eutrema salsugineum HOM05D007332 ORTHO05D009297 1.5e-13 80.1 222 32.9
Carub.0002s2429 Capsella rubella HOM05D007332 ORTHO05D009297 2.0e-13 79.7 232 32.8
BcaC03g15733 Brassica carinata HOM05D007332 ORTHO05D009297 2.6e-13 79.3 231 34.2
Dinv14654 Davidia involucrata HOM05D007332 ORTHO05D009297 3.4e-13 79.0 173 37.0
Aa31LG4G7420 Aethionema arabicum HOM05D007332 ORTHO05D009297 4.5e-13 78.6 224 32.6
MD15G1344600 Malus domestica HOM05D007332 ORTHO05D009297 5.9e-13 78.2 205 35.1
FAN15G1303 Fragaria x ananassa HOM05D007332 ORTHO05D009297 1.0e-12 77.4 161 38.5
Prupe.1G492300 Prunus persica HOM05D007332 ORTHO05D009297 2.9e-12 75.9 197 34.0
Ca_16594_v3 Cicer arietinum L. HOM05D007332 ORTHO05D009297 3.8e-12 75.5 150 40.7
MBI06_g33108_MAGBIO Magnolia biondii HOM05D007332 ORTHO05D009297 1.1e-11 73.9 142 37.3
HanXRQChr09g0260291 Helianthus annuus HOM05D007332 ORTHO05D009297 7.2e-11 71.2 175 37.7
BolC2t09481H Brassica oleracea HOM05D007332 ORTHO05D009297 1.6e-10 70.1 226 32.7
Migut.L00247 Erythranthe guttata HOM05D007332 ORTHO05D009297 3.6e-10 68.9 118 40.7
Migut.L00823 Erythranthe guttata HOM05D007332 ORTHO05D009297 3.6e-10 68.9 118 40.7
Lsat_1_v5_gn_4_74261 Lactuca sativa HOM05D007332 ORTHO05D009297 7.9e-10 67.8 168 36.3
Nn1g08887 Nelumbo nucifera HOM05D007332 ORTHO05D009297 1.4e-09 67.0 204 32.8
Aqoxy5G02371 Aquilegia oxysepala HOM05D007332 ORTHO05D009297 2.5e-08 62.8 129 34.9
Lalb_Chr17g0343611 Lupinus albus HOM05D007332 ORTHO05D009297 3.3e-08 62.4 164 36.0
Sed0015452 Sechium edule HOM05D007332 ORTHO05D009297 1.3e-07 60.5 145 37.2
CANSAT25G2745 Cannabis sativa HOM05D007332 ORTHO05D009297 1.4e-06 57.0 161 36.0
A02p21250 Brassica napus HOM05D007332 ORTHO05D009297 6.9e-06 54.7 162 33.3
C02p34520 Brassica napus HOM05D007332 ORTHO05D009297 9.1e-06 54.3 153 33.3


User provided reference genes

Program Settings