Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3373 Salvia bowleyana HOM05D006105 ORTHO05D006345 2.5e-187 658.7 346 100.0
SalBow7G2198 Salvia bowleyana HOM05D006105 ORTHO05D006345 1.6e-186 656.0 346 99.1
MSTRG.14216 Avicennia marina HOM05D006105 ORTHO05D006345 1.5e-51 207.6 455 40.7
MSTRG.14950 Avicennia marina HOM05D006105 ORTHO05D006345 6.4e-42 175.6 432 36.6
Dinv14962 Davidia involucrata HOM05D006105 ORTHO05D006345 6.2e-37 159.1 394 37.1
SalBow8G2605 Salvia bowleyana HOM05D006105 ORTHO05D006345 8.1e-37 158.7 351 37.9
CSS0022090 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 3.4e-35 153.3 407 35.6
Actinidia35226 Actinidia chinensis HOM05D006105 ORTHO05D006345 5.8e-35 152.5 326 38.7
Oeu005394.1 Olea europaea HOM05D006105 ORTHO05D006345 8.4e-34 148.7 336 41.4
Dinv18338 Davidia involucrata HOM05D006105 ORTHO05D006345 8.7e-31 138.7 230 43.9
Hma1.2p1_0688F.1_g203660 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 2.1e-29 134.0 320 39.7
Actinidia18787 Actinidia chinensis HOM05D006105 ORTHO05D006345 3.7e-29 133.3 330 35.8
Rhsim06G0204700 Rhododendron simsii HOM05D006105 ORTHO05D006345 1.4e-28 131.3 321 37.4
SGA_v2.0_scaffold73G24208 Striga asiatica HOM05D006105 ORTHO05D006345 1.4e-28 131.3 398 32.7
CSS0026032 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 3.1e-28 130.2 315 37.5
Actinidia07497 Actinidia chinensis HOM05D006105 ORTHO05D006345 6.9e-28 129.0 321 38.3
Nitab4.5_0005445g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 2.9e-26 123.6 395 34.7
SGA_v2.0_scaffold34G13768 Striga asiatica HOM05D006105 ORTHO05D006345 2.9e-26 123.6 407 35.6
Hma1.2p1_0416F.1_g148610 Hydrangea macrophylla HOM05D006105 ORTHO05D006345 8.4e-26 122.1 314 35.4
Migut.M00751 Erythranthe guttata HOM05D006105 ORTHO05D006345 2.5e-25 120.6 338 36.7
Ciclev10010617m.g Citrus clementina HOM05D006105 ORTHO05D006345 3.2e-25 120.2 312 33.7
Peaxi162Scf00000g02515 Petunia axillaris HOM05D006105 ORTHO05D006345 9.3e-25 118.6 373 35.9
Oeu059277.1 Olea europaea HOM05D006105 ORTHO05D006345 2.7e-24 117.1 398 33.7
Haze_09360 Corylus avellana HOM05D006105 ORTHO05D006345 1.8e-23 114.4 337 35.6
ECA234G3938 Erigeron canadensis HOM05D006105 ORTHO05D006345 8.7e-23 112.1 400 34.5
PGSC0003DMG400015376 Solanum tuberosum HOM05D006105 ORTHO05D006345 1.9e-22 110.9 338 35.5
Cfa019604 Carpinus fangiana HOM05D006105 ORTHO05D006345 4.3e-22 109.8 301 35.2
Sopen12g005900 Solanum pennellii HOM05D006105 ORTHO05D006345 7.4e-22 109.0 338 34.6
Prupe.4G171200 Prunus persica HOM05D006105 ORTHO05D006345 8.2e-21 105.5 343 33.2
Rhsim04G0024000 Rhododendron simsii HOM05D006105 ORTHO05D006345 1.4e-20 104.8 354 36.7
HanXRQChr10g0304731 Helianthus annuus HOM05D006105 ORTHO05D006345 3.1e-20 103.6 359 32.0
QL08p027367 Quercus lobata HOM05D006105 ORTHO05D006345 3.1e-20 103.6 325 33.2
Sopen07g030920 Solanum pennellii HOM05D006105 ORTHO05D006345 4.1e-20 103.2 354 34.2
AUR62037870 Chenopodium quinoa HOM05D006105 ORTHO05D006345 9.0e-20 102.1 247 38.5
AUR62019562 Chenopodium quinoa HOM05D006105 ORTHO05D006345 2.0e-19 100.9 235 40.0
Solyc07g062685.2 Solanum lycopersicum HOM05D006105 ORTHO05D006345 2.0e-19 100.9 358 33.5
DCAR_019586 Daucus carota HOM05D006105 ORTHO05D006345 2.6e-19 100.5 242 39.3
MBI07_g17039_MAGBIO Magnolia biondii HOM05D006105 ORTHO05D006345 5.9e-19 99.4 380 32.4
DCAR_013141 Daucus carota HOM05D006105 ORTHO05D006345 1.0e-18 98.6 400 31.2
Atru.chr2.2260 Acer truncatum HOM05D006105 ORTHO05D006345 1.7e-18 97.8 329 33.1
Oeu061338.1 Olea europaea HOM05D006105 ORTHO05D006345 1.7e-18 97.8 211 36.5
Gorai.004G029900 Gossypium raimondii HOM05D006105 ORTHO05D006345 2.2e-18 97.4 329 32.2
Gohir.A08G021700 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.9e-18 97.1 331 32.0
Duzib213G0100 Durio zibethinus HOM05D006105 ORTHO05D006345 3.8e-18 96.7 341 34.3
RcHm_v2.0_Chr5g0031561 Rosa chinensis HOM05D006105 ORTHO05D006345 5.0e-18 96.3 373 32.4
FAN21G1974 Fragaria x ananassa HOM05D006105 ORTHO05D006345 8.5e-18 95.5 353 36.5
CiPaw.12G115300 Carya illinoinensis HOM05D006105 ORTHO05D006345 3.2e-17 93.6 257 37.7
Duzib268G0903 Durio zibethinus HOM05D006105 ORTHO05D006345 7.2e-17 92.4 333 33.0
FvH4_3g18750 Fragaria vesca HOM05D006105 ORTHO05D006345 9.4e-17 92.0 352 33.5
FAN25G1303 Fragaria x ananassa HOM05D006105 ORTHO05D006345 9.4e-17 92.0 355 33.8
Nitab4.5_0003202g0040 Nicotiana tabacum HOM05D006105 ORTHO05D006345 9.4e-17 92.0 403 31.3
VMungo1080G1877 Vigna mungo HOM05D006105 ORTHO05D006345 9.4e-17 92.0 357 31.4
CiPaw.11G164300 Carya illinoinensis HOM05D006105 ORTHO05D006345 1.2e-16 91.7 251 35.1
Manes.03G103501 Manihot esculenta HOM05D006105 ORTHO05D006345 2.1e-16 90.9 302 33.8
FAN16G1829 Fragaria x ananassa HOM05D006105 ORTHO05D006345 2.7e-16 90.5 354 33.6
Gohir.D08G032500 Gossypium hirsutum HOM05D006105 ORTHO05D006345 2.7e-16 90.5 332 31.9
Lj8A152T79 Lonicera japonica HOM05D006105 ORTHO05D006345 4.6e-16 89.7 358 30.7
COL.COLO4_17616 Corchorus olitorius HOM05D006105 ORTHO05D006345 6.1e-16 89.4 344 32.3
HanXRQChr12g0372831 Helianthus annuus HOM05D006105 ORTHO05D006345 7.9e-16 89.0 361 29.9
Thecc.07G103600 Theobroma cacao HOM05D006105 ORTHO05D006345 7.9e-16 89.0 315 34.6
Sc03g0010360 Simmondsia chinensis HOM05D006105 ORTHO05D006345 1.0e-15 88.6 237 37.1
Dinv17387 Davidia involucrata HOM05D006105 ORTHO05D006345 1.8e-15 87.8 390 28.7
Nitab4.5_0000246g0110 Nicotiana tabacum HOM05D006105 ORTHO05D006345 1.8e-15 87.8 298 31.5
Potri.001G375600 Populus trichocarpa HOM05D006105 ORTHO05D006345 3.0e-15 87.0 342 31.9
GSVIVG01014239001 Vitis vinifera HOM05D006105 ORTHO05D006345 5.1e-15 86.3 325 32.3
TAR629G1657 Trochodendron aralioides HOM05D006105 ORTHO05D006345 6.7e-15 85.9 318 30.2
MD03G1238800 Malus domestica HOM05D006105 ORTHO05D006345 8.8e-15 85.5 363 31.4
PSO541G5705 Papaver somniferum HOM05D006105 ORTHO05D006345 8.8e-15 85.5 382 29.6
FAN11G0448 Fragaria x ananassa HOM05D006105 ORTHO05D006345 1.1e-14 85.1 354 32.2
arahy.Tifrunner.gnm1.ann1.KE6FEG Arachis hypogaea HOM05D006105 ORTHO05D006345 2.0e-14 84.3 303 31.4
Lsat_1_v5_gn_7_103061 Lactuca sativa HOM05D006105 ORTHO05D006345 2.0e-14 84.3 325 32.6
Gorai.002G064700 Gossypium raimondii HOM05D006105 ORTHO05D006345 5.7e-14 82.8 314 32.2
MD11G1258600 Malus domestica HOM05D006105 ORTHO05D006345 1.7e-13 81.3 264 35.6
DCAR_021012 Daucus carota HOM05D006105 ORTHO05D006345 2.8e-13 80.5 300 31.7
Glyma.13G271900 Glycine max HOM05D006105 ORTHO05D006345 3.7e-13 80.1 337 30.0
Lsat_1_v5_gn_5_129201 Lactuca sativa HOM05D006105 ORTHO05D006345 6.3e-13 79.3 380 30.3
Nitab4.5_0003077g0030 Nicotiana tabacum HOM05D006105 ORTHO05D006345 6.3e-13 79.3 347 29.7
Cpa.g.sc131.73 Carica papaya HOM05D006105 ORTHO05D006345 8.2e-13 79.0 338 31.7
Cc05_g11450 Coffea canephora HOM05D006105 ORTHO05D006345 1.1e-12 78.6 244 36.1
Phvul.005G068000 Phaseolus vulgaris HOM05D006105 ORTHO05D006345 1.1e-12 78.6 358 30.7
Aqoxy1G02199 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 1.4e-12 78.2 257 34.6
Glyma.12G228100 Glycine max HOM05D006105 ORTHO05D006345 1.4e-12 78.2 338 31.4
Sabra16G0247400 Salix brachista HOM05D006105 ORTHO05D006345 1.4e-12 78.2 233 33.9
Eucgr.F01202 Eucalyptus grandis HOM05D006105 ORTHO05D006345 5.3e-12 76.3 258 34.9
arahy.Tifrunner.gnm1.ann1.TTJ9YL Arachis hypogaea HOM05D006105 ORTHO05D006345 6.9e-12 75.9 276 31.9
TAR629G0423 Trochodendron aralioides HOM05D000109 ORTHO05D000965 6.9e-12 75.9 329 29.2
Gohir.A01G059000 Gossypium hirsutum HOM05D006105 ORTHO05D006345 9.1e-12 75.5 232 35.3
PSO675G6909 Papaver somniferum HOM05D006105 ORTHO05D006345 9.1e-12 75.5 363 30.6
TWI38G0440 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 9.1e-12 75.5 310 31.6
Glyma.06G232600 Glycine max HOM05D006105 ORTHO05D006345 1.2e-11 75.1 297 31.0
arahy.Tifrunner.gnm1.ann1.LEI4AX Arachis hypogaea HOM05D006105 ORTHO05D006345 1.5e-11 74.7 395 28.6
CsaV3_4G033280 Cucumis sativus L. HOM05D006105 ORTHO05D006345 2.0e-11 74.3 236 34.7
ClCG11G017660 Citrullus lanatus HOM05D006105 ORTHO05D006345 4.5e-11 73.2 252 34.1
Peaxi162Scf00069g01930 Petunia axillaris HOM05D006105 ORTHO05D006345 1.0e-10 72.0 240 34.2
TPR.G9213 Trifolium pratense HOM05D006105 ORTHO05D006345 1.0e-10 72.0 409 28.4
Migut.H01972 Erythranthe guttata HOM05D006105 ORTHO05D006345 1.3e-10 71.6 153 36.6
MELO3C025628.2 Cucumis melo HOM05D006105 ORTHO05D006345 2.9e-10 70.5 243 34.6
Gohir.D01G045100 Gossypium hirsutum HOM05D006105 ORTHO05D006345 3.8e-10 70.1 308 30.5
PGSC0003DMG400021273 Solanum tuberosum HOM05D006105 ORTHO05D006345 6.5e-10 69.3 296 32.1
Nn1g09023 Nelumbo nucifera HOM05D006105 ORTHO05D006345 8.5e-10 68.9 298 32.2
Lalb_Chr25g0286021 Lupinus albus HOM05D006105 ORTHO05D006345 3.2e-09 67.0 338 31.7
CSS0004572 Camellia sinensis var. sinensis HOM05D006105 ORTHO05D006345 4.2e-09 66.6 149 35.6
Ca_04016_v3 Cicer arietinum L. HOM05D006105 ORTHO05D006345 4.2e-09 66.6 347 29.7
Solyc12g014120.3 Solanum lycopersicum HOM05D006105 ORTHO05D006345 5.5e-09 66.2 175 37.7
TWI39G0145 Tripterygium wilfordii HOM05D006105 ORTHO05D006345 2.1e-08 64.3 319 30.7
Lj3g0024128 Lotus japonicus HOM05D006105 ORTHO05D006345 4.7e-08 63.2 237 31.2
TAR627G0886 Trochodendron aralioides HOM05D000157 ORTHO05D006345 6.1e-08 62.8 230 29.6
DCAR_024487 Daucus carota HOM05D006105 ORTHO05D006345 7.9e-08 62.4 313 30.4
ATR0602G093 Amborella trichopoda HOM05D006105 ORTHO05D006345 1.4e-07 61.6 322 29.2
PGR083G1480 Punica granatum HOM05D006105 ORTHO05D006345 1.4e-07 61.6 331 29.6
PGSC0003DMG400012397 Solanum tuberosum HOM05D006105 ORTHO05D006345 2.3e-07 60.8 206 30.6
Medtr2g078220 Medicago truncatula HOM05D006105 ORTHO05D006345 5.1e-07 59.7 421 26.4
Psat5g240600 Pisum sativum HOM05D006105 ORTHO05D006345 5.1e-07 59.7 256 32.0
Sed0015488 Sechium edule HOM05D006105 ORTHO05D006345 5.1e-07 59.7 329 29.8
Sed0026435 Sechium edule HOM05D006105 ORTHO05D006345 5.1e-07 59.7 309 30.7
CsaV3_4G008420 Cucumis sativus L. HOM05D006105 ORTHO05D006345 6.7e-07 59.3 333 29.4
Sed0005720 Sechium edule HOM05D006105 ORTHO05D006345 6.7e-07 59.3 302 28.5
Aqoxy4G00493 Aquilegia oxysepala HOM05D006105 ORTHO05D006345 2.0e-06 57.8 348 27.3


User provided reference genes

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