Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3290 Salvia bowleyana HOM05D008742 ORTHO05D010377 7.3e-147 523.9 263 100.0
MSTRG.25490 Avicennia marina HOM05D008742 ORTHO05D010377 2.5e-62 243.0 269 52.0
Solyc11g031970.2 Solanum lycopersicum HOM05D008742 ORTHO05D010377 2.9e-50 203.0 274 45.6
Nitab4.5_0001359g0010 Nicotiana tabacum HOM05D008742 ORTHO05D010377 3.7e-50 202.6 274 45.3
Nitab4.5_0001278g0110 Nicotiana tabacum HOM05D008742 ORTHO05D010377 5.4e-49 198.7 274 44.5
Sopen11g014500 Solanum pennellii HOM05D008742 ORTHO05D010377 5.0e-47 192.2 275 44.4
Migut.C01345 Erythranthe guttata HOM05D008742 ORTHO05D010377 1.1e-46 191.0 283 44.9
PGSC0003DMG400031182 Solanum tuberosum HOM05D008742 ORTHO05D010377 1.2e-45 187.6 275 43.6
Potri.013G102300 Populus trichocarpa HOM05D008742 ORTHO05D010377 4.1e-41 172.6 289 40.1
Peaxi162Scf00688g00019 Petunia axillaris HOM05D008742 ORTHO05D010377 4.6e-40 169.1 264 40.5
TAR628G0950 Trochodendron aralioides HOM05D008742 ORTHO05D010377 1.3e-39 167.5 254 41.3
Aqoxy6G00073 Aquilegia oxysepala HOM05D008742 ORTHO05D010377 9.5e-38 161.4 253 39.5
QL10p026828 Quercus lobata HOM05D008742 ORTHO05D010377 1.6e-37 160.6 294 38.1
CiPaw.03G017300 Carya illinoinensis HOM05D008742 ORTHO05D010377 2.0e-35 153.7 288 38.5
Cfa008115 Carpinus fangiana HOM05D008742 ORTHO05D010377 7.6e-35 151.8 281 38.4
Thecc.08G171700 Theobroma cacao HOM05D008742 ORTHO05D010377 1.7e-34 150.6 283 38.9
Manes.18G121000 Manihot esculenta HOM05D008742 ORTHO05D010377 1.4e-33 147.5 294 36.1
Ciclev10021221m.g Citrus clementina HOM05D008742 ORTHO05D010377 1.9e-33 147.1 321 34.3
Gohir.D13G122200 Gossypium hirsutum HOM05D008742 ORTHO05D010377 1.9e-33 147.1 257 38.5
CANSAT25G0509 Cannabis sativa HOM05D008742 ORTHO05D010377 4.1e-33 146.0 279 34.4
PGR042G1068 Punica granatum HOM05D008742 ORTHO05D010377 4.1e-33 146.0 265 37.4
GSVIVG01025912001 Vitis vinifera HOM05D008742 ORTHO05D010377 6.6e-31 138.7 237 38.0
Gorai.013G136900 Gossypium raimondii HOM05D008742 ORTHO05D010377 1.1e-30 137.9 283 36.4
Sabra13G0088400 Salix brachista HOM05D008742 ORTHO05D010377 4.3e-30 136.0 344 33.4
MBI03_g14517_MAGBIO Magnolia biondii HOM05D008742 ORTHO05D010377 1.2e-29 134.4 260 37.7
Gohir.A13G118401 Gossypium hirsutum HOM05D008742 ORTHO05D010377 1.6e-29 134.0 286 35.3
PSO170G1705 Papaver somniferum HOM05D008742 ORTHO05D010377 8.1e-29 131.7 257 35.0
ATR1136G217 Amborella trichopoda HOM05D008742 ORTHO05D010377 1.1e-28 131.3 230 38.3
Cc10_g16420 Coffea canephora HOM05D008742 ORTHO05D010377 1.4e-28 131.0 236 41.1
PSO782G1932 Papaver somniferum HOM05D008742 ORTHO05D010377 1.4e-28 131.0 277 35.4
ClCG08G000630 Citrullus lanatus HOM05D008742 ORTHO05D010377 1.8e-28 130.6 274 34.7
Eucgr.F02959 Eucalyptus grandis HOM05D008742 ORTHO05D010377 9.9e-27 124.8 288 33.7
MELO3C022199.2 Cucumis melo HOM05D008742 ORTHO05D010377 5.1e-23 112.5 254 32.7
CsaV3_5G040230 Cucumis sativus L. HOM05D008742 ORTHO05D010377 6.6e-23 112.1 253 32.8
THA.LOC104815909 Tarenaya hassleriana HOM05D012304 ORTHO05D010377 9.6e-22 108.2 225 32.9
Dinv41793 Davidia involucrata HOM05D008742 ORTHO05D010377 1.1e-20 104.8 96 57.3
TWI59G0981 Tripterygium wilfordii HOM05D008742 ORTHO05D010377 1.7e-18 97.4 133 39.8
Cpa.g.sc21.53 Carica papaya HOM05D008742 ORTHO05D010377 4.9e-18 95.9 245 32.2
Migut.C01342 Erythranthe guttata HOM05D008742 ORTHO05D010377 3.9e-15 86.3 100 54.0
CDE07G1611 Ceratophyllum demersum HOM05D008742 ORTHO05D010377 1.5e-14 84.3 141 39.7
Haze_13917 Corylus avellana HOM05D008742 ORTHO05D010377 1.1e-12 78.2 120 40.0
Thhalv10028904m.g Eutrema salsugineum HOM05D012304 ORTHO05D010377 9.9e-11 71.6 233 27.0
AL6G43670 Arabidopsis lyrata HOM05D012304 ORTHO05D010377 1.7e-10 70.9 235 28.9
Sed0018339 Sechium edule HOM05D008742 ORTHO05D010377 3.2e-09 66.6 263 27.8
Duzib177G0721 Durio zibethinus HOM05D008742 ORTHO05D010377 1.6e-08 64.3 85 37.6
Aa31LG9G12020 Aethionema arabicum HOM05D012304 ORTHO05D010377 2.3e-07 60.5 240 24.2
Duzib177G0864 Durio zibethinus HOM05D008742 ORTHO05D010377 1.5e-06 57.8 83 41.0
SMO236G0128 Selaginella moellendorffii HOM05D008742 ORTHO05D010377 9.6e-06 55.1 233 25.3


User provided reference genes

Program Settings