Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3223 Salvia bowleyana HOM05D009933 ORTHO05D012084 4.4e-104 381.3 197 100.0
SalBow7G3334 Salvia bowleyana HOM05D000059 ORTHO05D012084 1.7e-87 326.2 161 99.4
SalBow7G2832 Salvia bowleyana HOM05D009933 ORTHO05D012084 9.3e-70 267.3 162 81.5
Migut.G00780 Erythranthe guttata HOM05D009933 ORTHO05D012084 4.3e-35 152.1 147 49.0
SGA_v2.0_scaffold74G24613 Striga asiatica HOM05D009933 ORTHO05D012084 3.4e-32 142.5 154 46.8
Migut.I00636 Erythranthe guttata HOM05D009933 ORTHO05D012084 2.0e-27 126.7 160 40.0
SGA_v2.0_scaffold74G24609 Striga asiatica HOM05D009933 ORTHO05D009712 4.1e-25 119.0 150 41.3
Oeu043379.1 Olea europaea HOM05D009933 ORTHO05D012084 6.9e-25 118.2 150 39.3
SGA_v2.0_scaffold74G24619 Striga asiatica HOM05D009933 ORTHO05D012084 1.0e-23 114.4 129 46.5
Oeu043429.1 Olea europaea HOM05D009933 ORTHO05D012084 2.2e-23 113.2 150 38.7
unitig_60.g25616 Utricularia gibba HOM05D009933 ORTHO05D012084 3.3e-19 99.4 146 34.9
SGA_v2.0_scaffold74G24614 Striga asiatica HOM05D008339 ORTHO05D009712 2.6e-16 89.7 101 41.6
Rhsim11G0099000 Rhododendron simsii HOM05D008339 ORTHO05D009712 4.5e-16 89.0 152 32.2
Sed0007759 Sechium edule HOM05D008339 ORTHO05D009712 1.6e-13 80.5 154 30.5
Potri.005G007100 Populus trichocarpa HOM05D008339 ORTHO05D009712 2.1e-13 80.1 151 32.5
PGSC0003DMG400038811 Solanum tuberosum HOM05D009933 ORTHO05D012084 3.6e-13 79.3 146 32.9
Peaxi162Scf01623g00014 Petunia axillaris HOM05D009933 ORTHO05D012084 6.1e-13 78.6 140 29.3
Solyc08g016120.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 2.3e-12 76.6 147 29.3
Oeu060879.1 Olea europaea HOM05D009933 ORTHO05D012084 3.0e-12 76.3 149 33.6
ClCG02G014760 Citrullus lanatus HOM05D008339 ORTHO05D009712 3.9e-12 75.9 163 28.8
Solyc08g016110.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 3.9e-12 75.9 144 29.2
MD12G1203500 Malus domestica HOM05D008339 ORTHO05D009712 6.7e-12 75.1 148 32.4
PGSC0003DMG400003969 Solanum tuberosum HOM05D009933 ORTHO05D012084 6.7e-12 75.1 147 28.6
Thhalv10009592m.g Eutrema salsugineum HOM05D013394 ORTHO05D009712 1.1e-11 74.3 152 31.6
Solyc08g016100.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 1.1e-11 74.3 147 28.6
Thecc.05G309700 Theobroma cacao HOM05D008339 ORTHO05D009712 2.0e-11 73.6 149 29.5
Nitab4.5_0002441g0060 Nicotiana tabacum HOM05D009933 ORTHO05D012084 4.4e-11 72.4 112 31.2
CAN.G676.49 Capsicum annuum HOM05D009933 ORTHO05D012084 9.7e-11 71.2 136 27.9
AT1G09370 Arabidopsis thaliana HOM05D009911 ORTHO05D009712 1.3e-10 70.9 171 31.0
Haze_04054 Corylus avellana HOM05D008339 ORTHO05D009712 1.7e-10 70.5 152 29.6
Sp1g07970 Schrenkiella parvula HOM05D013394 ORTHO05D009712 1.7e-10 70.5 149 30.9
Solyc11g005470.1 Solanum lycopersicum HOM05D009933 ORTHO05D012084 2.2e-10 70.1 147 27.9
BraA06t23824Z Brassica rapa HOM05D009911 ORTHO05D009712 2.8e-10 69.7 163 31.3
Ah.06g196240 Amaranthus hybridus HOM05D008339 ORTHO05D009712 3.7e-10 69.3 155 30.3
AUR62000433 Chenopodium quinoa HOM05D000060 ORTHO05D004147 3.7e-10 69.3 147 29.3
PGR031G0599 Punica granatum HOM05D008339 ORTHO05D009712 3.7e-10 69.3 161 28.0
CARHR178520 Cardamine hirsuta HOM05D013394 ORTHO05D009712 4.8e-10 68.9 152 28.3
CsaV3_2G007240 Cucumis sativus L. HOM05D008339 ORTHO05D007109 4.8e-10 68.9 165 28.5
PGSC0003DMG400003994 Solanum tuberosum HOM05D009933 ORTHO05D012084 6.3e-10 68.6 140 30.0
A06p06100 Brassica napus HOM05D013394 ORTHO05D009712 1.1e-09 67.8 149 28.9
TWI12G1182 Tripterygium wilfordii HOM05D008339 ORTHO05D009712 1.1e-09 67.8 165 24.8
BraA06t23823Z Brassica rapa HOM05D013394 ORTHO05D009712 1.4e-09 67.4 149 28.9
Carub.0001s0871 Capsella rubella HOM05D009911 ORTHO05D009712 1.4e-09 67.4 151 29.1
BcaC05g24790 Brassica carinata HOM05D009911 ORTHO05D009712 1.8e-09 67.0 165 29.7
BolC5t29493H Brassica oleracea HOM05D009911 ORTHO05D009712 1.8e-09 67.0 165 29.7
PGR004G1038 Punica granatum HOM05D008339 ORTHO05D009712 1.8e-09 67.0 145 28.3
A06p06110 Brassica napus HOM05D009911 ORTHO05D009712 2.4e-09 66.6 163 30.7
Sabra05G0006500 Salix brachista HOM05D008339 ORTHO05D009712 3.1e-09 66.2 136 30.9
C05p07340 Brassica napus HOM05D013394 ORTHO05D009712 5.3e-09 65.5 149 28.2
MELO3C004156.2 Cucumis melo HOM05D008339 ORTHO05D009712 9.1e-09 64.7 154 26.6
MELO3C004166.2 Cucumis melo HOM05D008339 ORTHO05D009712 9.1e-09 64.7 154 27.3
BcaC05g24789 Brassica carinata HOM05D013394 ORTHO05D009712 1.2e-08 64.3 149 28.2
BolC5t29492H Brassica oleracea HOM05D013394 ORTHO05D009712 1.2e-08 64.3 149 28.2
BraA06t23818Z Brassica rapa HOM05D009911 ORTHO05D009712 2.0e-08 63.5 154 30.5
ClCG02G014750 Citrullus lanatus HOM05D008339 ORTHO05D013640 2.0e-08 63.5 151 29.1
Sc02g0000800 Simmondsia chinensis HOM05D009933 ORTHO05D012084 4.5e-08 62.4 163 25.2
A06p06070 Brassica napus HOM05D009911 ORTHO05D009712 5.9e-08 62.0 154 29.9
PGR031G3971 Punica granatum HOM05D008339 ORTHO05D009712 5.9e-08 62.0 162 25.3
SGA_v2.0_scaffold48G17932 Striga asiatica HOM05D008339 ORTHO05D009712 1.7e-07 60.5 139 27.3
C05p07360 Brassica napus HOM05D009911 ORTHO05D009712 2.9e-07 59.7 151 28.5
CARHR009330 Cardamine hirsuta HOM05D009911 ORTHO05D009712 5.0e-07 58.9 170 25.9
Sp1g07980 Schrenkiella parvula HOM05D009911 ORTHO05D009712 8.5e-07 58.2 157 26.8
Peaxi162Scf01623g00015 Petunia axillaris HOM05D009933 ORTHO05D012084 1.5e-06 57.4 90 32.2
THA.LOC104816853 Tarenaya hassleriana HOM05D009911 ORTHO05D009712 2.5e-06 56.6 144 27.8
AT5G24370 Arabidopsis thaliana HOM05D009945 ORTHO05D012028 9.4e-06 54.7 151 20.5


User provided reference genes

Program Settings