Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3203 Salvia bowleyana HOM05D008148 ORTHO05D010295 3.0e-31 137.9 69 100.0
SalBow6G6640 Salvia bowleyana HOM05D008148 ORTHO05D010295 2.5e-30 134.8 69 98.6
SGA_v2.0_scaffold34G13787 Striga asiatica HOM05D008148 ORTHO05D010295 4.6e-16 87.4 55 74.5
Migut.M00719 Erythranthe guttata HOM05D008148 ORTHO05D010295 1.0e-15 86.3 60 68.3
Oeu059259.1 Olea europaea HOM05D008148 ORTHO05D010295 1.0e-15 86.3 66 63.6
Cc05_g11020 Coffea canephora HOM05D008148 ORTHO05D010295 4.8e-13 77.4 66 59.1
arahy.Tifrunner.gnm1.ann1.GBF3HF Arachis hypogaea HOM05D008148 ORTHO05D010295 6.9e-12 73.6 73 52.1
arahy.Tifrunner.gnm1.ann1.MJJR0W Arachis hypogaea HOM05D008148 ORTHO05D010295 9.0e-12 73.2 74 52.7
CiPaw.11G159800 Carya illinoinensis HOM05D008148 ORTHO05D010295 3.4e-11 71.2 65 58.5
Eucgr.F03276 Eucalyptus grandis HOM05D008148 ORTHO05D010295 3.8e-10 67.8 65 50.8
TPR.G16053 Trifolium pratense HOM05D008148 ORTHO05D010295 6.4e-10 67.0 70 52.9
Actinidia12583 Actinidia chinensis HOM05D008148 ORTHO05D010295 2.4e-09 65.1 65 55.4
Sabra11G0096700 Salix brachista HOM05D008148 ORTHO05D010295 2.4e-09 65.1 67 49.3
Prupe.4G164100 Prunus persica HOM05D008148 ORTHO05D010295 4.2e-09 64.3 59 52.5
DCAR_013159 Daucus carota HOM05D008148 ORTHO05D010295 5.4e-09 63.9 52 59.6
MD11G1264400 Malus domestica HOM05D008148 ORTHO05D010295 7.1e-09 63.5 55 52.7
Migut.H02001 Erythranthe guttata HOM05D008148 ORTHO05D010295 9.3e-09 63.2 45 66.7
Ca_03959_v3 Cicer arietinum L. HOM05D008148 ORTHO05D010295 2.1e-08 62.0 66 51.5
Medtr2g076020 Medicago truncatula HOM05D008148 ORTHO05D010295 4.6e-08 60.8 69 52.2
PGR031G2401 Punica granatum HOM05D008148 ORTHO05D010295 4.6e-08 60.8 68 47.1
AL1G29090 Arabidopsis lyrata HOM05D008148 ORTHO05D010295 6.0e-08 60.5 63 44.4
Glyma.12G230300 Glycine max HOM05D008148 ORTHO05D010295 6.0e-08 60.5 65 49.2
Lj3g0020996 Lotus japonicus HOM05D008148 ORTHO05D010295 6.0e-08 60.5 68 51.5
unitig_85.g27419 Utricularia gibba HOM05D055015 ORTHO05D010295 6.0e-08 60.5 72 45.8
unitig_86.g29830 Utricularia gibba HOM05D055015 ORTHO05D010295 6.0e-08 60.5 72 45.8
Psat5g237240 Pisum sativum HOM05D008148 ORTHO05D010295 7.9e-08 60.1 69 47.8
Potri.011G109100 Populus trichocarpa HOM05D008148 ORTHO05D010295 7.9e-08 60.1 60 48.3
Prupe.4G163600 Prunus persica HOM05D008148 ORTHO05D010295 7.9e-08 60.1 55 54.5
MELO3C025654.2 Cucumis melo HOM05D008148 ORTHO05D010295 1.0e-07 59.7 67 47.8
Atru.chr2.2119 Acer truncatum HOM05D008148 ORTHO05D010295 1.3e-07 59.3 65 50.8
THA.LOC104812318 Tarenaya hassleriana HOM05D008148 ORTHO05D010295 1.3e-07 59.3 68 50.0
Sc03g0010550 Simmondsia chinensis HOM05D008148 ORTHO05D010295 1.8e-07 58.9 62 51.6
AT1G16916 Arabidopsis thaliana HOM05D008148 ORTHO05D010295 2.3e-07 58.5 41 56.1
CSS0001630 Camellia sinensis var. sinensis HOM05D008148 ORTHO05D010295 2.3e-07 58.5 57 52.6
Carub.0001s1665 Capsella rubella HOM05D008148 ORTHO05D010295 3.0e-07 58.2 65 46.2
Nn1g04456 Nelumbo nucifera HOM05D008148 ORTHO05D010295 3.0e-07 58.2 48 56.2
Lalb_Chr25g0285821 Lupinus albus HOM05D008148 ORTHO05D010295 3.9e-07 57.8 69 52.2
C08p44200 Brassica napus HOM05D008148 ORTHO05D010295 5.1e-07 57.4 53 52.8
FAN11G2091 Fragaria x ananassa HOM05D008148 ORTHO05D010295 5.1e-07 57.4 54 53.7
FAN21G2680 Fragaria x ananassa HOM05D008148 ORTHO05D010295 5.1e-07 57.4 54 53.7
RcHm_v2.0_Chr5g0030781 Rosa chinensis HOM05D008148 ORTHO05D010295 5.1e-07 57.4 54 51.9
Glyma.13G269300 Glycine max HOM05D008148 ORTHO05D010295 6.7e-07 57.0 58 48.3
CARHR017420 Cardamine hirsuta HOM05D008148 ORTHO05D010295 8.7e-07 56.6 45 57.8
GSVIVG01014187001 Vitis vinifera HOM05D008148 ORTHO05D010295 8.7e-07 56.6 50 50.0
Aqoxy4G00298 Aquilegia oxysepala HOM05D037719 ORTHO05D031273 1.1e-06 56.2 36 66.7
BcaC07g41389 Brassica carinata HOM05D008148 ORTHO05D010295 1.1e-06 56.2 45 57.8
BraA09t41440Z Brassica rapa HOM05D008148 ORTHO05D010295 1.1e-06 56.2 43 60.5
CsaV3_4G032950 Cucumis sativus L. HOM05D008148 ORTHO05D010295 1.1e-06 56.2 67 46.3
A09p60700 Brassica napus HOM05D008148 ORTHO05D010295 1.9e-06 55.5 43 58.1
Phvul.005G081700 Phaseolus vulgaris HOM05D008148 ORTHO05D010295 1.9e-06 55.5 40 57.5
Manes.15G095500 Manihot esculenta HOM05D008148 ORTHO05D010295 3.3e-06 54.7 56 48.2
Sp1g15050 Schrenkiella parvula HOM05D008148 ORTHO05D010295 3.3e-06 54.7 62 46.8
Cpa.g.sc77.20 Carica papaya HOM05D008148 ORTHO05D010295 4.3e-06 54.3 71 49.3
Thhalv10009282m.g Eutrema salsugineum HOM05D008148 ORTHO05D010295 7.4e-06 53.5 61 49.2


User provided reference genes

Program Settings