Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3147 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.2e-35 152.5 74 100.0
SalBow8G4375 Salvia bowleyana HOM05D004571 ORTHO05D005334 1.8e-34 148.7 74 98.6
SalBow1G4736 Salvia bowleyana HOM05D004571 ORTHO05D005334 4.3e-28 127.5 63 96.8
SalBow1G5773 Salvia bowleyana HOM05D004571 ORTHO05D005334 5.8e-25 117.1 57 98.2
SGA_v2.0_scaffold24G10606 Striga asiatica HOM05D004571 ORTHO05D005334 2.1e-19 98.6 69 69.6
Oeu044957.1 Olea europaea HOM05D004571 ORTHO05D005334 1.4e-18 95.9 72 65.3
Migut.C01321 Erythranthe guttata HOM05D004571 ORTHO05D005334 9.0e-18 93.2 69 65.2
HanXRQChr02g0036591 Helianthus annuus HOM05D004571 ORTHO05D005334 1.2e-17 92.8 60 71.7
Potri.013G105766 Populus trichocarpa HOM05D004571 ORTHO05D005334 3.4e-17 91.3 58 72.4
AUR62004601 Chenopodium quinoa HOM05D004571 ORTHO05D005334 5.8e-17 90.5 64 67.2
AUR62023543 Chenopodium quinoa HOM05D004571 ORTHO05D005334 5.8e-17 90.5 64 67.2
unitig_26.g9866 Utricularia gibba HOM05D004571 ORTHO05D005334 5.8e-17 90.5 69 66.7
CiPaw.08G002900 Carya illinoinensis HOM05D004571 ORTHO05D005334 9.9e-17 89.7 58 72.4
ECA247G3605 Erigeron canadensis HOM05D004571 ORTHO05D005334 9.9e-17 89.7 56 73.2
Nn1g08340 Nelumbo nucifera HOM05D004571 ORTHO05D005334 9.9e-17 89.7 59 71.2
Sabra19G0089800 Salix brachista HOM05D004571 ORTHO05D005334 9.9e-17 89.7 58 69.0
CiPaw.07G235800 Carya illinoinensis HOM05D004571 ORTHO05D005334 1.3e-16 89.4 58 70.7
Gohir.D13G122900 Gossypium hirsutum HOM05D004571 ORTHO05D005334 1.3e-16 89.4 59 69.5
Gohir.D13G123000 Gossypium hirsutum HOM05D004571 ORTHO05D005334 1.3e-16 89.4 59 69.5
Gorai.013G137900 Gossypium raimondii HOM05D004571 ORTHO05D005334 1.3e-16 89.4 59 69.5
HanXRQChr04g0101791 Helianthus annuus HOM05D004571 ORTHO05D005334 1.3e-16 89.4 56 71.4
Potri.019G079101 Populus trichocarpa HOM05D004571 ORTHO05D005334 1.3e-16 89.4 58 69.0
Rhsim11G0053000 Rhododendron simsii HOM05D004571 ORTHO05D005334 1.3e-16 89.4 58 69.0
Hund27115 Selenicereus undatus HOM05D004571 ORTHO05D005334 1.3e-16 89.4 56 71.4
Sed0021715 Sechium edule HOM05D004571 ORTHO05D005334 1.7e-16 89.0 63 65.1
AT1G22520 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 2.2e-16 88.6 62 64.5
THA.LOC104800135 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 2.2e-16 88.6 71 60.6
Actinidia29414 Actinidia chinensis HOM05D004571 ORTHO05D005334 2.9e-16 88.2 58 67.2
Ah.05g178570 Amaranthus hybridus HOM05D004571 ORTHO05D005334 2.9e-16 88.2 64 65.6
Gohir.A13G119100 Gossypium hirsutum HOM05D004571 ORTHO05D005334 2.9e-16 88.2 59 67.8
Aa31LG4G8400 Aethionema arabicum HOM05D004571 ORTHO05D005334 3.8e-16 87.8 70 58.6
EL10Ac1g00135 Beta vulgaris HOM05D004571 ORTHO05D005334 3.8e-16 87.8 53 75.5
CSS0010340 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 3.8e-16 87.8 53 73.6
DCAR_014081 Daucus carota HOM05D004571 ORTHO05D005334 4.9e-16 87.4 56 67.9
ClCG08G000160 Citrullus lanatus HOM05D004571 ORTHO05D005334 6.4e-16 87.0 56 73.2
Gohir.A13G119200 Gossypium hirsutum HOM05D004571 ORTHO05D005334 6.4e-16 87.0 59 67.8
AL1G36060 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 8.4e-16 86.7 62 62.9
Haze_21312 Corylus avellana HOM05D004571 ORTHO05D005334 8.4e-16 86.7 58 69.0
Hma1.2p1_0374F.1_g138460 Hydrangea macrophylla HOM05D004571 ORTHO05D005334 8.4e-16 86.7 56 69.6
Medtr3g005050 Medicago truncatula HOM05D004571 ORTHO05D005334 8.4e-16 86.7 58 69.0
Sabra13G0091300 Salix brachista HOM05D004571 ORTHO05D005334 8.4e-16 86.7 58 70.7
Sc23g0001520 Simmondsia chinensis HOM05D004571 ORTHO05D005334 8.4e-16 86.7 56 67.9
Thecc.08G192400 Theobroma cacao HOM05D004571 ORTHO05D005334 8.4e-16 86.7 59 64.4
TAR381G0940 Trochodendron aralioides HOM05D004571 ORTHO05D005334 8.4e-16 86.7 56 67.9
Atru.chr13.2366 Acer truncatum HOM05D004571 ORTHO05D005334 1.1e-15 86.3 58 67.2
BraA07t31392Z Brassica rapa HOM05D004571 ORTHO05D005334 1.1e-15 86.3 65 63.1
AT1G72170 Arabidopsis thaliana HOM05D004571 ORTHO05D005334 1.4e-15 85.9 65 64.6
Carub.0001s2205 Capsella rubella HOM05D004571 ORTHO05D005334 1.4e-15 85.9 59 66.1
COL.COLO4_24652 Corchorus olitorius HOM05D004571 ORTHO05D005334 1.4e-15 85.9 58 67.2
CsaV3_5G040560 Cucumis sativus L. HOM05D004571 ORTHO05D005334 1.4e-15 85.9 56 71.4
Manes.02G223200 Manihot esculenta HOM05D004571 ORTHO05D005334 1.4e-15 85.9 56 73.2
BolC6t38614H Brassica oleracea HOM05D004571 ORTHO05D005334 1.9e-15 85.5 65 63.1
CARHR022880 Cardamine hirsuta HOM05D004571 ORTHO05D005334 1.9e-15 85.5 74 58.1
Ca_13497_v3 Cicer arietinum L. HOM05D004571 ORTHO05D005334 1.9e-15 85.5 70 61.4
MELO3C022229.2 Cucumis melo HOM05D004571 ORTHO05D005334 1.9e-15 85.5 56 71.4
ECA246G2468 Erigeron canadensis HOM05D004571 ORTHO05D005334 1.9e-15 85.5 56 71.4
Lsat_1_v5_gn_1_25881 Lactuca sativa HOM05D004571 ORTHO05D005334 1.9e-15 85.5 59 67.8
Sp5g27250 Schrenkiella parvula HOM05D004571 ORTHO05D005334 1.9e-15 85.5 65 63.1
AL2G31830 Arabidopsis lyrata HOM05D004571 ORTHO05D005334 2.4e-15 85.1 65 63.1
Carub.0002s1897 Capsella rubella HOM05D004571 ORTHO05D005334 2.4e-15 85.1 65 63.1
Ciclev10002721m.g Citrus clementina HOM05D004571 ORTHO05D005334 2.4e-15 85.1 58 65.5
Lj3g0024961 Lotus japonicus HOM05D004571 ORTHO05D005334 2.4e-15 85.1 56 69.6
HPP92_012688 Vanilla planifolia HOM05D004571 ORTHO05D005334 2.4e-15 85.1 63 57.1
C06p35100 Brassica napus HOM05D004571 ORTHO05D005334 3.2e-15 84.7 65 63.1
QL02p026432 Quercus lobata HOM05D004571 ORTHO05D005334 3.2e-15 84.7 60 63.3
Sp1g20030 Schrenkiella parvula HOM05D004571 ORTHO05D005334 3.2e-15 84.7 58 67.2
SEGI_09168 Sequoiadendron giganteum HOM05D004571 ORTHO05D005334 3.2e-15 84.7 61 62.3
TPR.G25514 Trifolium pratense HOM05D004571 ORTHO05D005334 3.2e-15 84.7 56 69.6
HPP92_012699 Vanilla planifolia HOM05D004571 ORTHO05D005334 3.2e-15 84.7 63 57.1
ATR1136G048 Amborella trichopoda HOM05D004571 ORTHO05D005334 4.2e-15 84.3 59 64.4
arahy.Tifrunner.gnm1.ann1.ET922W Arachis hypogaea HOM05D004571 ORTHO05D005334 4.2e-15 84.3 56 69.6
arahy.Tifrunner.gnm1.ann1.Q0KDHL Arachis hypogaea HOM05D008831 ORTHO05D005334 4.2e-15 84.3 56 69.6
A07p38280 Brassica napus HOM05D004571 ORTHO05D005334 4.2e-15 84.3 56 67.9
C06p46340 Brassica napus HOM05D004571 ORTHO05D005334 4.2e-15 84.3 56 67.9
BolC6t39679H Brassica oleracea HOM05D004571 ORTHO05D005334 4.2e-15 84.3 56 67.9
Cpa.g.sc66.1 Carica papaya HOM05D004571 ORTHO05D005334 4.2e-15 84.3 56 67.9
DCAR_017443 Daucus carota HOM05D004571 ORTHO05D005334 4.2e-15 84.3 56 67.9
Dinv41758 Davidia involucrata HOM05D004571 ORTHO05D005334 4.2e-15 84.3 56 67.9
Phvul.005G000100 Phaseolus vulgaris HOM05D004571 ORTHO05D005334 4.2e-15 84.3 56 69.6
BcaB03g14198 Brassica carinata HOM05D004571 ORTHO05D005334 5.4e-15 84.0 58 65.5
BcaB03g14960 Brassica carinata HOM05D004571 ORTHO05D005334 5.4e-15 84.0 56 67.9
CARHR065020 Cardamine hirsuta HOM05D004571 ORTHO05D005334 5.4e-15 84.0 65 61.5
HanXRQChr13g0402341 Helianthus annuus HOM05D004571 ORTHO05D005334 5.4e-15 84.0 56 67.9
SalBow7G4145 Salvia bowleyana HOM05D004571 ORTHO05D005334 5.4e-15 84.0 66 60.6
TWI14G1164 Tripterygium wilfordii HOM05D004571 ORTHO05D005334 5.4e-15 84.0 58 63.8
VMungo1080G1505 Vigna mungo HOM05D004571 ORTHO05D005334 5.4e-15 84.0 56 69.6
A07p30330 Brassica napus HOM05D004571 ORTHO05D005334 7.1e-15 83.6 56 67.9
BraA07t30670Z Brassica rapa HOM05D004571 ORTHO05D005334 7.1e-15 83.6 56 67.9
CDE02G1838 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 7.1e-15 83.6 56 66.1
Thhalv10009192m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 7.1e-15 83.6 59 64.4
Nn5g27495 Nelumbo nucifera HOM05D004571 ORTHO05D005334 9.3e-15 83.2 56 67.9
CANSAT80G2522 Cannabis sativa HOM05D004571 ORTHO05D005334 1.2e-14 82.8 66 59.1
Glyma.06G325200 Glycine max HOM05D004571 ORTHO05D005334 1.2e-14 82.8 56 67.9
PGSC0003DMG400025645 Solanum tuberosum HOM05D004571 ORTHO05D005334 1.2e-14 82.8 72 56.9
TAR628G0297 Trochodendron aralioides HOM05D004571 ORTHO05D005334 1.2e-14 82.8 56 66.1
GSVIVG01026083001 Vitis vinifera HOM05D004571 ORTHO05D005334 1.2e-14 82.8 56 64.3
CDE08G1034 Ceratophyllum demersum HOM05D004571 ORTHO05D005334 1.6e-14 82.4 56 64.3
Glyma.04G256400 Glycine max HOM05D004571 ORTHO05D005334 1.6e-14 82.4 56 67.9
MD15G1405800 Malus domestica HOM05D004571 ORTHO05D005334 1.6e-14 82.4 56 66.1
PSO017G1736 Papaver somniferum HOM05D004571 ORTHO05D005334 1.6e-14 82.4 58 65.5
PSO170G5138 Papaver somniferum HOM05D004571 ORTHO05D005334 1.6e-14 82.4 58 65.5
Aqoxy5G02645 Aquilegia oxysepala HOM05D004571 ORTHO05D005334 2.1e-14 82.0 56 66.1
MD08G1217900 Malus domestica HOM05D004571 ORTHO05D005334 2.1e-14 82.0 56 64.3
Prupe.1G555400 Prunus persica HOM05D004571 ORTHO05D005334 2.1e-14 82.0 56 64.3
BcaC07g39167 Brassica carinata HOM05D004571 ORTHO05D005334 2.7e-14 81.6 65 61.5
A08p28490 Brassica napus HOM05D004571 ORTHO05D005334 2.7e-14 81.6 63 60.3
C08p21600 Brassica napus HOM05D004571 ORTHO05D005334 2.7e-14 81.6 65 61.5
BolC8t49798H Brassica oleracea HOM05D004571 ORTHO05D005334 2.7e-14 81.6 63 60.3
BraA08t34777Z Brassica rapa HOM05D004571 ORTHO05D005334 2.7e-14 81.6 63 60.3
Solyc11g027870.2 Solanum lycopersicum HOM05D004571 ORTHO05D005334 2.7e-14 81.6 72 55.6
Sopen11g022630 Solanum pennellii HOM05D004571 ORTHO05D005334 2.7e-14 81.6 72 55.6
BcaB03g11911 Brassica carinata HOM05D004571 ORTHO05D005334 3.5e-14 81.3 56 67.9
Psat1g003360 Pisum sativum HOM05D004571 ORTHO05D005334 3.5e-14 81.3 56 67.9
FAN18G0720 Fragaria x ananassa HOM05D004571 ORTHO05D005334 4.6e-14 80.9 56 64.3
MBI16_g31756_MAGBIO Magnolia biondii HOM05D004571 ORTHO05D005334 4.6e-14 80.9 57 61.4
Nitab4.5_0001463g0030 Nicotiana tabacum HOM05D004571 ORTHO05D005334 4.6e-14 80.9 73 54.8
Nitab4.5_0005616g0050 Nicotiana tabacum HOM05D004571 ORTHO05D005334 4.6e-14 80.9 73 54.8
PGR042G2098 Punica granatum HOM05D004571 ORTHO05D005334 4.6e-14 80.9 58 60.3
RcHm_v2.0_Chr7g0227581 Rosa chinensis HOM05D004571 ORTHO05D005334 4.6e-14 80.9 56 62.5
CANSAT25G3741 Cannabis sativa HOM05D004571 ORTHO05D005334 6.0e-14 80.5 56 62.5
FvH4_5g31700 Fragaria vesca HOM05D004571 ORTHO05D005334 6.0e-14 80.5 56 62.5
FAN04G0250 Fragaria x ananassa HOM05D004571 ORTHO05D005334 6.0e-14 80.5 56 64.3
SalBow5G3518 Salvia bowleyana HOM05D002016 ORTHO05D002251 6.0e-14 80.5 66 59.1
PSO170G6605 Papaver somniferum HOM05D004571 ORTHO05D005334 7.9e-14 80.1 53 66.0
Actinidia03516 Actinidia chinensis HOM05D004571 ORTHO05D005334 1.0e-13 79.7 58 62.1
Zm00001eb063990 Zea mays HOM05D004571 ORTHO05D005334 1.0e-13 79.7 56 62.5
Zm00001eb211000 Zea mays HOM05D004571 ORTHO05D005334 1.0e-13 79.7 55 63.6
FAN13G1323 Fragaria x ananassa HOM05D004571 ORTHO05D005334 1.8e-13 79.0 56 62.5
THA.LOC104809727 Tarenaya hassleriana HOM05D004571 ORTHO05D005334 1.8e-13 79.0 78 53.8
Aa31LG7G6430 Aethionema arabicum HOM05D004571 ORTHO05D005334 3.0e-13 78.2 56 64.3
Duzib116G0804 Durio zibethinus HOM05D004571 ORTHO05D005334 5.1e-13 77.4 72 52.8
Os03g0840900 Oryza sativa ssp. japonica HOM05D004571 ORTHO05D005334 6.7e-13 77.0 56 58.9
Thhalv10019513m.g Eutrema salsugineum HOM05D004571 ORTHO05D005334 8.7e-13 76.6 65 61.5
CANSAT56G3739 Cannabis sativa HOM05D004571 ORTHO05D005334 1.1e-12 76.3 55 61.8
Pp3c6_25110 Physcomitrium patens HOM05D004571 ORTHO05D005334 1.5e-12 75.9 63 54.0
MD17G1233400 Malus domestica HOM05D004571 ORTHO05D005334 2.5e-12 75.1 60 56.7
HPP92_016944 Vanilla planifolia HOM05D004571 ORTHO05D005334 2.5e-12 75.1 57 57.9
AagrBONN_evm.TU.Sc2ySwM_344.525 Anthoceros agrestis HOM05D004571 ORTHO05D005334 3.3e-12 74.7 67 52.2
Pp3c5_3370 Physcomitrium patens HOM05D004571 ORTHO05D005334 5.6e-12 73.9 51 62.7
Pp3c16_13970 Physcomitrium patens HOM05D004571 ORTHO05D005334 2.8e-11 71.6 51 62.7
Peaxi162Scf00688g00440 Petunia axillaris HOM05D004571 ORTHO05D005334 8.1e-11 70.1 61 47.5
AagrBONN_evm.TU.Sc2ySwM_117.1227 Anthoceros agrestis HOM05D004571 ORTHO05D005334 1.8e-10 68.9 56 55.4
SMO170G0007 Selaginella moellendorffii HOM05D004571 ORTHO05D005334 3.1e-10 68.2 50 62.0
CSS0023243 Camellia sinensis var. sinensis HOM05D004571 ORTHO05D005334 4.0e-10 67.8 46 67.4
Cc10_g09660 Coffea canephora HOM05D004571 ORTHO05D005334 5.3e-10 67.4 56 44.6
Peaxi162Scf00076g00210 Petunia axillaris HOM05D004571 ORTHO05D005334 6.9e-10 67.0 66 48.5
CBR_g28554 Chara braunii HOM05D004571 ORTHO05D005334 9.0e-10 66.6 51 62.7
A07p14330 Brassica napus HOM05D004571 ORTHO05D005334 1.2e-09 66.2 58 51.7
BraA07t29189Z Brassica rapa HOM05D004571 ORTHO05D005334 1.2e-09 66.2 58 51.7
Mapoly0097s0059 Marchantia polymorpha HOM05D004571 ORTHO05D005334 2.0e-09 65.5 51 56.9


User provided reference genes

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