Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G3019 Salvia bowleyana HOM05D010254 ORTHO05D015184 5.8e-159 564.7 291 100.0
SalBow1G8112 Salvia bowleyana HOM05D001678 ORTHO05D001698 3.3e-69 266.5 166 81.9
SalBow8G3237 Salvia bowleyana HOM05D001678 ORTHO05D001698 2.4e-56 223.8 360 45.0
SalBow3G4530 Salvia bowleyana HOM05D001678 ORTHO05D001698 5.3e-51 206.1 149 71.1
SalBow1G2097 Salvia bowleyana HOM05D001678 ORTHO05D001698 4.9e-49 199.5 146 69.9
SalBow1G8139 Salvia bowleyana HOM05D001678 ORTHO05D001698 1.1e-48 198.4 168 60.1
SalBow5G3870 Salvia bowleyana HOM05D001678 ORTHO05D001698 5.5e-48 196.1 160 61.9
SalBow2G0634 Salvia bowleyana HOM05D001678 ORTHO05D001698 3.5e-47 193.4 197 59.9
FAN14G3339 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.5e-34 151.4 170 48.2
FvH4_6g20420 Fragaria vesca HOM05D000034 ORTHO05D001698 3.4e-34 150.2 165 48.5
SalBow1G0950 Salvia bowleyana HOM05D001678 ORTHO05D001698 2.3e-30 137.5 88 80.7
FvH4_2g00551 Fragaria vesca HOM05D001678 ORTHO05D001698 1.4e-27 128.3 149 48.3
RcHm_v2.0_Chr3g0476481 Rosa chinensis HOM05D001678 ORTHO05D001698 3.1e-27 127.1 171 41.5
FAN13G1605 Fragaria x ananassa HOM05D001678 ORTHO05D001698 2.5e-24 117.5 170 42.4
FAN23G1752 Fragaria x ananassa HOM05D001678 ORTHO05D001698 2.3e-22 110.9 170 41.2
SalBow6G4203 Salvia bowleyana HOM05D010254 ORTHO05D015184 8.8e-22 109.0 53 100.0
Lj3C1037T5 Lonicera japonica HOM05D001678 ORTHO05D001698 2.0e-21 107.8 171 38.6
Lj6A398T11 Lonicera japonica HOM05D001678 ORTHO05D001698 2.0e-21 107.8 171 38.6
SalBow1G5470 Salvia bowleyana HOM05D001678 ORTHO05D001698 9.7e-21 105.5 81 69.1
DCAR_005360 Daucus carota HOM05D001678 ORTHO05D001698 3.7e-20 103.6 171 36.3
SalBow1G8270 Salvia bowleyana HOM05D001678 ORTHO05D001698 2.4e-19 100.9 261 34.9
FvH4_4g17330 Fragaria vesca HOM05D001678 ORTHO05D001698 5.3e-19 99.8 171 39.2
SalBow7G3201 Salvia bowleyana HOM05D001678 ORTHO05D001698 6.9e-19 99.4 79 67.1
SalBow1G5680 Salvia bowleyana HOM05D010254 ORTHO05D015184 3.4e-18 97.1 47 97.9
SalBow7G4360 Salvia bowleyana HOM05D010254 ORTHO05D015184 7.7e-18 95.9 128 48.4
SalBow1G2345 Salvia bowleyana HOM05D010254 ORTHO05D015184 2.9e-17 94.0 45 97.8
SalBow1G4571 Salvia bowleyana HOM05D010254 ORTHO05D015184 2.9e-17 94.0 45 97.8
SalBow7G4140 Salvia bowleyana HOM05D010254 ORTHO05D015184 2.9e-17 94.0 45 97.8
Prupe.1G170700 Prunus persica HOM05D001678 ORTHO05D001698 5.0e-17 93.2 175 36.6
Prupe.4G168300 Prunus persica HOM05D001678 ORTHO05D001698 5.0e-17 93.2 175 36.6
DCAR_002869 Daucus carota HOM05D001678 ORTHO05D001698 1.4e-16 91.7 165 36.4
FAN12G1326 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.4e-16 91.7 174 38.5
SalBow1G3824 Salvia bowleyana HOM05D010254 ORTHO05D015184 1.4e-16 91.7 67 71.6
FAN01G1612 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.9e-16 91.3 129 41.9
SalBow1G8411 Salvia bowleyana HOM05D010254 ORTHO05D015184 1.9e-16 91.3 44 97.7
SalBow8G4306 Salvia bowleyana HOM05D010254 ORTHO05D015184 7.2e-16 89.4 45 93.3
FAN23G0320 Fragaria x ananassa HOM05D001678 ORTHO05D001698 6.1e-15 86.3 161 38.5
DCAR_003999 Daucus carota HOM05D001678 ORTHO05D001698 7.9e-15 85.9 159 34.0
SalBow1G4633 Salvia bowleyana HOM05D001678 ORTHO05D001698 2.3e-14 84.3 57 68.4
SalBow7G1213 Salvia bowleyana HOM05D010254 ORTHO05D015184 5.1e-14 83.2 44 90.9
FAN12G3116 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.5e-13 81.6 174 35.6
Prupe.3G105400 Prunus persica HOM05D001678 ORTHO05D001698 1.5e-13 81.6 175 32.0
Atru.chr7.11 Acer truncatum HOM05D000034 ORTHO05D000037 7.4e-13 79.3 175 37.7
Oeu029512.1 Olea europaea HOM05D001678 ORTHO05D001698 4.8e-12 76.6 170 32.9
Prupe.7G010100 Prunus persica HOM05D001678 ORTHO05D001698 4.8e-12 76.6 184 31.5
RcHm_v2.0_Chr5g0008231 Rosa chinensis HOM05D001678 ORTHO05D001698 1.4e-11 75.1 77 40.3
Lj1A169T8 Lonicera japonica HOM05D001678 ORTHO05D001698 4.1e-11 73.6 101 38.6
RcHm_v2.0_Chr6g0281401 Rosa chinensis HOM05D001678 ORTHO05D001698 4.1e-11 73.6 172 33.7
Atru.chr12.2214 Acer truncatum HOM05D001678 ORTHO05D001698 9.1e-11 72.4 188 31.4
Prupe.4G156100 Prunus persica HOM05D001678 ORTHO05D001698 9.1e-11 72.4 179 32.4
Atru.chr13.2422 Acer truncatum HOM05D001678 ORTHO05D001698 1.6e-10 71.6 178 29.8
FAN04G1238 Fragaria x ananassa HOM05D001678 ORTHO05D001698 3.5e-10 70.5 143 35.7
Glyma.20G169100 Glycine max HOM05D001678 ORTHO05D001698 3.5e-10 70.5 178 30.3
Medtr1g106600 Medicago truncatula HOM05D001678 ORTHO05D001698 3.5e-10 70.5 183 29.5
Medtr1g106608 Medicago truncatula HOM05D001678 ORTHO05D001698 3.5e-10 70.5 183 29.5
Medtr6g018520 Medicago truncatula HOM05D001678 ORTHO05D001698 3.5e-10 70.5 183 29.5
Medtr6g025650 Medicago truncatula HOM05D001678 ORTHO05D001698 3.5e-10 70.5 183 29.5
SGA_v2.0_scaffold296G47542 Striga asiatica HOM05D001678 ORTHO05D001698 3.5e-10 70.5 164 29.3
Glyma.10G211500 Glycine max HOM05D001678 ORTHO05D001698 7.7e-10 69.3 178 29.8
Glyma.18G175000 Glycine max HOM05D001678 ORTHO05D001698 7.7e-10 69.3 178 30.9
Glyma.07G133600 Glycine max HOM05D001678 ORTHO05D001698 1.3e-09 68.6 176 31.2
Glyma.10G128600 Glycine max HOM05D001678 ORTHO05D001698 1.3e-09 68.6 223 28.7
Glyma.14G219200 Glycine max HOM05D001678 ORTHO05D001698 1.3e-09 68.6 182 31.9
Oeu035952.1 Olea europaea HOM05D001678 ORTHO05D001698 1.3e-09 68.6 170 31.8
Medtr3g097540 Medicago truncatula HOM05D001678 ORTHO05D001698 1.7e-09 68.2 183 31.1
DCAR_017789 Daucus carota HOM05D001678 ORTHO05D001698 2.2e-09 67.8 169 30.8
Glyma.08G208800 Glycine max HOM05D001678 ORTHO05D001698 2.2e-09 67.8 180 31.7
FAN02G2409 Fragaria x ananassa HOM05D001678 ORTHO05D001698 3.8e-09 67.0 136 36.8
Glyma.01G126100 Glycine max HOM05D001678 ORTHO05D001698 3.8e-09 67.0 180 31.7
Glyma.06G182400 Glycine max HOM05D001678 ORTHO05D001698 3.8e-09 67.0 180 31.7
Glyma.10G293700 Glycine max HOM05D001678 ORTHO05D001698 3.8e-09 67.0 180 31.7
Glyma.12G113000 Glycine max HOM05D001678 ORTHO05D001698 3.8e-09 67.0 180 31.7
Glyma.19G032300 Glycine max HOM05D001678 ORTHO05D001698 3.8e-09 67.0 180 31.7
Atru.chr6.779 Acer truncatum HOM05D001678 ORTHO05D001698 5.0e-09 66.6 172 29.7
Glyma.01G110000 Glycine max HOM05D001678 ORTHO05D001698 5.0e-09 66.6 184 30.4
Glyma.06G095100 Glycine max HOM05D001678 ORTHO05D001698 5.0e-09 66.6 184 30.4
Glyma.11G167500 Glycine max HOM05D001678 ORTHO05D001698 6.5e-09 66.2 171 31.0
FAN26G1383 Fragaria x ananassa HOM05D001678 ORTHO05D001698 8.5e-09 65.9 54 55.6
Glyma.10G131100 Glycine max HOM05D001678 ORTHO05D001698 8.5e-09 65.9 174 31.6
Glyma.15G150600 Glycine max HOM05D001678 ORTHO05D001698 8.5e-09 65.9 180 31.7
Glyma.14G191800 Glycine max HOM05D001678 ORTHO05D001698 1.1e-08 65.5 173 28.9
RcHm_v2.0_Chr4g0395221 Rosa chinensis HOM05D001678 ORTHO05D001698 1.1e-08 65.5 133 36.8
Prupe.1G177900 Prunus persica HOM05D001678 ORTHO05D001698 1.5e-08 65.1 171 29.2
Glyma.08G218300 Glycine max HOM05D001678 ORTHO05D001698 1.9e-08 64.7 180 30.6
Prupe.8G061600 Prunus persica HOM05D001678 ORTHO05D001698 2.5e-08 64.3 165 27.9
SalBow8G2104 Salvia bowleyana HOM05D020975 ORTHO05D360901 2.5e-08 64.3 36 86.1
DCAR_007692 Daucus carota HOM05D001678 ORTHO05D001698 3.2e-08 63.9 166 30.1
SalBow5G2423 Salvia bowleyana HOM05D010254 ORTHO05D015184 3.2e-08 63.9 46 69.6
FAN08G3647 Fragaria x ananassa HOM05D001678 ORTHO05D001698 4.2e-08 63.5 178 31.5
Glyma.10G200900 Glycine max HOM05D001678 ORTHO05D001698 4.2e-08 63.5 171 30.4
TPR.G8361 Trifolium pratense HOM05D001678 ORTHO05D001698 4.2e-08 63.5 190 28.9
RcHm_v2.0_Chr4g0409291 Rosa chinensis HOM05D001678 ORTHO05D001698 5.5e-08 63.2 166 33.7
SGA_v2.0_scaffold25G11062 Striga asiatica HOM05D001678 ORTHO05D001698 5.5e-08 63.2 187 27.3
Glyma.13G184400 Glycine max HOM05D001678 ORTHO05D001698 9.4e-08 62.4 180 30.6
FvH4_6g24700 Fragaria vesca HOM05D001678 ORTHO05D001698 2.1e-07 61.2 178 30.9
BcaC05g27161 Brassica carinata HOM05D001678 ORTHO05D001698 2.7e-07 60.8 117 35.9
BolC5t31786H Brassica oleracea HOM05D001678 ORTHO05D001698 2.7e-07 60.8 184 30.4
FvH4_3g09360 Fragaria vesca HOM05D002475 ORTHO05D002710 2.7e-07 60.8 163 27.0
SGA_v2.0_scaffold27G11443 Striga asiatica HOM05D001678 ORTHO05D001698 2.7e-07 60.8 155 29.0
SGA_v2.0_scaffold68G22889 Striga asiatica HOM05D001678 ORTHO05D001698 2.7e-07 60.8 155 29.0
FAN26G0826 Fragaria x ananassa HOM05D001678 ORTHO05D001698 4.7e-07 60.1 82 46.3
FAN26G1256 Fragaria x ananassa HOM05D001678 ORTHO05D001698 4.7e-07 60.1 82 46.3
SGA_v2.0_scaffold2614G54162 Striga asiatica HOM05D001678 ORTHO05D001698 4.7e-07 60.1 172 26.7
Lj2A433T12 Lonicera japonica HOM05D001678 ORTHO05D001698 6.1e-07 59.7 56 48.2
Oeu039328.1 Olea europaea HOM05D001678 ORTHO05D001698 6.1e-07 59.7 164 26.8
Glyma.01G111800 Glycine max HOM05D001678 ORTHO05D001698 8.0e-07 59.3 176 31.8
Glyma.17G190600 Glycine max HOM05D001678 ORTHO05D001698 8.0e-07 59.3 183 29.5
Thhalv10027019m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 1.8e-06 58.2 186 29.6
SalBow7G0583 Salvia bowleyana HOM05D039095 ORTHO05D357917 1.8e-06 58.2 29 89.7
PSO764G0063 Papaver somniferum HOM05D001678 ORTHO05D001698 2.3e-06 57.8 219 26.5
Prupe.1G229800 Prunus persica HOM05D001678 ORTHO05D001698 2.3e-06 57.8 182 30.8
Glyma.05G193100 Glycine max HOM05D001678 ORTHO05D001698 3.0e-06 57.4 173 30.6
SGA_v2.0_scaffold414G51212 Striga asiatica HOM05D001678 ORTHO05D001698 4.0e-06 57.0 148 26.4
C05p30510 Brassica napus HOM05D001678 ORTHO05D032997 5.2e-06 56.6 117 34.2
BraA06t25821Z Brassica rapa HOM05D001678 ORTHO05D001698 6.7e-06 56.2 60 45.0
Glyma.17G148300 Glycine max HOM05D001678 ORTHO05D001698 6.7e-06 56.2 171 29.8
SalBow6G3723 Salvia bowleyana HOM05D000375 ORTHO05D000240 6.7e-06 56.2 36 77.8


User provided reference genes

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