Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 7.8e-135 483.8 243 100.0
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 4.5e-82 308.5 249 65.5
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 2.7e-79 299.3 226 68.1
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 3.0e-78 295.8 197 75.1
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 2.0e-74 283.1 218 64.2
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 2.9e-73 279.3 209 68.4
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 3.8e-73 278.9 236 61.4
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 6.5e-73 278.1 244 60.2
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 1.9e-72 276.6 244 60.2
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 3.2e-72 275.8 238 60.5
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 7.1e-72 274.6 229 62.0
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 2.1e-71 273.1 229 61.6
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 2.1e-71 273.1 205 66.3
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 3.5e-71 272.3 226 62.8
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 4.6e-71 271.9 196 67.9
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 4.6e-71 271.9 196 67.9
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 4.6e-71 271.9 224 63.4
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 6.1e-71 271.6 215 63.7
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 7.9e-71 271.2 229 61.6
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 7.9e-71 271.2 218 63.8
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 7.9e-71 271.2 192 68.2
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 1.0e-70 270.8 222 60.4
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.8e-70 270.0 202 65.8
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 3.0e-70 269.2 201 66.2
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 6.7e-70 268.1 234 59.4
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 8.7e-70 267.7 242 59.5
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 1.1e-69 267.3 220 62.3
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 1.5e-69 266.9 221 61.5
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 4.3e-69 265.4 217 60.8
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 9.7e-69 264.2 219 61.2
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 1.6e-68 263.5 198 65.2
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 3.7e-68 262.3 213 62.4
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 3.7e-68 262.3 213 62.9
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 6.3e-68 261.5 213 62.4
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 6.3e-68 261.5 197 65.0
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 1.1e-67 260.8 215 60.9
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 1.1e-67 260.8 214 61.7
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 1.1e-67 260.8 211 60.2
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 2.4e-67 259.6 226 60.2
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 2.4e-67 259.6 193 64.8
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 2.4e-67 259.6 213 61.5
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 2.4e-67 259.6 200 63.5
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 3.1e-67 259.2 219 59.8
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 3.1e-67 259.2 223 59.6
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 5.3e-67 258.5 199 63.8
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 5.3e-67 258.5 212 61.3
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 5.3e-67 258.5 238 58.0
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 9.0e-67 257.7 195 64.6
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 1.2e-66 257.3 199 63.8
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 1.5e-66 256.9 216 60.2
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 2.6e-66 256.1 197 63.5
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 4.5e-66 255.4 198 63.1
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 2.2e-65 253.1 213 59.6
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 1.1e-64 250.8 199 62.8
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 1.4e-64 250.4 222 57.7
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 1.2e-63 247.3 196 63.3
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 3.6e-63 245.7 223 57.4
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 2.3e-62 243.0 218 58.7
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 2.5e-61 239.6 226 55.8
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 3.3e-61 239.2 209 59.3
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 3.3e-61 239.2 212 58.0
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 7.4e-61 238.0 236 54.7
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 7.4e-61 238.0 236 54.7
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 2.2e-60 236.5 209 57.4
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 3.7e-60 235.7 212 58.0
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 3.7e-60 235.7 212 58.0
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 3.7e-60 235.7 212 58.0
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 3.7e-60 235.7 190 61.1
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 4.8e-60 235.3 221 56.1
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 4.8e-60 235.3 219 56.6
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 4.8e-60 235.3 222 58.6
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 6.3e-60 235.0 189 61.9
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 1.4e-59 233.8 195 57.9
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 1.8e-59 233.4 224 54.9
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 1.8e-59 233.4 224 54.9
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 4.1e-59 232.3 195 59.0
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 1.2e-58 230.7 204 60.8
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 2.0e-58 229.9 221 55.2
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 2.0e-58 229.9 237 52.7
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 2.0e-58 229.9 194 58.8
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 5.9e-58 228.4 237 52.7
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 2.9e-57 226.1 190 58.9
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 1.4e-56 223.8 201 58.7
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 1.9e-56 223.4 201 58.2
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 2.5e-56 223.0 172 64.5
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 9.4e-56 221.1 183 61.2
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 3.6e-55 219.2 221 54.3
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 3.9e-54 215.7 184 61.4
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 1.1e-53 214.2 235 52.3
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 4.4e-53 212.2 200 56.0
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 3.7e-52 209.1 197 54.8
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 1.4e-51 207.2 202 55.9
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 3.1e-51 206.1 158 61.4
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 1.5e-48 197.2 189 57.1
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 5.5e-48 195.3 222 50.5
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 1.5e-45 187.2 192 51.6
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 7.4e-45 184.9 198 52.0
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 1.3e-44 184.1 162 58.0
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 9.1e-43 177.9 170 56.5
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 9.1e-43 177.9 188 49.5
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 1.0e-41 174.5 146 61.6
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 5.5e-40 168.7 182 46.2
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 2.1e-39 166.8 202 43.6
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 3.0e-38 162.9 180 50.0
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 6.3e-36 155.2 93 73.1
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 1.1e-35 154.5 188 48.9
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 2.4e-35 153.3 194 42.3
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.6e-34 150.6 219 40.2
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 2.2e-33 146.7 94 70.2
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 5.5e-32 142.1 102 69.6
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 3.0e-30 136.3 84 72.6
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 5.7e-29 132.1 139 49.6
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 1.7e-28 130.6 95 65.3
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 6.3e-28 128.6 127 55.9
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 7.7e-26 121.7 85 65.9
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 4.0e-22 109.4 129 48.1
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 3.4e-21 106.3 68 67.6
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 4.9e-20 102.4 90 63.3
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 2.4e-19 100.1 156 39.1
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 7.0e-19 98.6 104 54.8
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 3.5e-18 96.3 147 40.1
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 3.9e-17 92.8 148 39.9
C02p33520 Brassica napus HOM05D006215 ORTHO05D007719 8.9e-14 81.6 120 42.5
BolC2t09353H Brassica oleracea HOM05D006215 ORTHO05D007719 8.9e-14 81.6 127 40.9
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 4.9e-12 75.9 75 53.3
MCO13G478 Micromonas commoda HOM05D006215 ORTHO05D007719 4.9e-12 75.9 235 26.8
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 1.2e-10 71.2 42 83.3
PRCOL_00005216 Prasinoderma coloniale HOM05D006215 ORTHO05D007719 2.8e-07 60.1 168 32.7
TPR.G38152 Trifolium pratense HOM05D006215 ORTHO05D007719 8.0e-07 58.5 42 57.1
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 2.3e-06 57.0 58 53.4


User provided reference genes

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