Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 2.8e-72 275.4 165 100.0
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 1.4e-34 150.2 144 66.7
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 6.4e-32 141.4 152 58.6
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 1.7e-29 133.3 146 54.8
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 1.6e-27 126.7 132 55.3
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 2.1e-27 126.3 142 52.1
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 6.2e-27 124.8 147 48.3
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 9.0e-26 120.9 166 45.2
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 2.6e-25 119.4 145 49.0
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 4.5e-25 118.6 161 47.8
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 1.3e-24 117.1 157 43.3
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 1.7e-24 116.7 147 47.6
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 2.2e-24 116.3 154 48.1
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 2.9e-24 115.9 150 44.0
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 1.1e-23 114.0 134 50.0
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 1.4e-23 113.6 154 46.8
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 2.4e-23 112.8 148 45.9
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 4.2e-23 112.1 148 45.3
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 5.4e-23 111.7 135 47.4
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 5.4e-23 111.7 135 47.4
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 7.1e-23 111.3 155 43.9
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 7.1e-23 111.3 142 48.6
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 7.1e-23 111.3 142 46.5
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 1.6e-22 110.2 157 50.3
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 2.1e-22 109.8 149 50.3
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 2.7e-22 109.4 141 48.9
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.7e-22 109.4 136 47.8
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 3.5e-22 109.0 146 45.2
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 4.6e-22 108.6 165 41.2
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 4.6e-22 108.6 163 39.3
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 4.6e-22 108.6 159 46.5
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 1.0e-21 107.5 179 39.7
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.0e-21 107.5 142 43.7
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 1.0e-21 107.5 145 50.3
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.3e-21 106.3 154 45.5
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 3.0e-21 105.9 146 45.2
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 3.9e-21 105.5 146 44.5
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 3.9e-21 105.5 132 47.7
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 3.9e-21 105.5 147 44.2
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 5.1e-21 105.1 155 41.3
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 5.1e-21 105.1 150 45.3
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 6.7e-21 104.8 146 45.2
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 1.1e-20 104.0 167 41.9
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.5e-20 103.6 116 50.0
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 1.9e-20 103.2 154 41.6
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 1.9e-20 103.2 129 45.0
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 3.3e-20 102.4 159 39.6
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 3.3e-20 102.4 149 40.9
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 4.3e-20 102.1 149 43.6
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 4.3e-20 102.1 156 40.4
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 5.6e-20 101.7 147 40.8
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 7.4e-20 101.3 152 38.2
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 1.3e-19 100.5 122 47.5
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 1.3e-19 100.5 154 42.2
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 1.6e-19 100.1 148 52.7
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 1.6e-19 100.1 145 53.1
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 1.6e-19 100.1 152 42.1
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 2.1e-19 99.8 129 48.1
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 2.8e-19 99.4 126 46.0
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 4.8e-19 98.6 146 42.5
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 4.8e-19 98.6 136 46.3
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.1e-18 97.4 160 43.8
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 1.8e-18 96.7 153 38.6
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 1.8e-18 96.7 170 36.5
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 4.0e-18 95.5 173 36.4
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 4.0e-18 95.5 150 48.0
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 5.3e-18 95.1 170 35.9
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 5.3e-18 95.1 195 41.5
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 5.3e-18 95.1 160 45.0
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 6.9e-18 94.7 179 43.6
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 9.0e-18 94.4 159 39.0
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 9.0e-18 94.4 138 39.9
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 9.0e-18 94.4 180 43.3
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 1.2e-17 94.0 164 41.5
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 1.2e-17 94.0 166 40.4
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 1.2e-17 94.0 147 40.8
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 1.5e-17 93.6 157 40.1
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 2.0e-17 93.2 163 39.3
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 3.4e-17 92.4 154 48.1
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 3.4e-17 92.4 164 41.5
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 3.4e-17 92.4 164 41.5
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 4.5e-17 92.0 160 37.5
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 5.8e-17 91.7 156 47.4
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 5.8e-17 91.7 165 44.2
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 9.9e-17 90.9 165 40.6
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 9.9e-17 90.9 165 40.6
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 9.9e-17 90.9 168 40.5
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 1.3e-16 90.5 167 44.3
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 1.7e-16 90.1 163 39.3
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 2.2e-16 89.7 162 39.5
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 2.2e-16 89.7 179 41.3
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 2.9e-16 89.4 123 44.7
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 3.8e-16 89.0 134 41.8
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 6.4e-16 88.2 135 38.5
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 8.4e-16 87.8 182 34.6
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 1.9e-15 86.7 168 44.6
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 2.4e-15 86.3 147 36.7
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 3.2e-15 85.9 166 43.4
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 7.1e-15 84.7 59 62.7
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 9.3e-15 84.3 188 33.0
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 1.2e-14 84.0 131 43.5
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 2.1e-14 83.2 188 43.1
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 6.0e-14 81.6 115 43.5
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 1.3e-13 80.5 147 35.4
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 3.0e-13 79.3 146 39.7
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 8.7e-13 77.8 166 33.7
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 8.7e-13 77.8 177 42.4
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 1.5e-12 77.0 65 53.8
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 1.9e-12 76.6 187 33.7
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 1.9e-12 76.6 116 39.7
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 3.3e-12 75.9 53 60.4
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 4.3e-12 75.5 140 34.3
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 7.4e-12 74.7 127 38.6
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 7.4e-12 74.7 62 54.8
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 9.6e-12 74.3 53 60.4
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 9.6e-12 74.3 65 56.9
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 9.6e-12 74.3 65 56.9
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 2.1e-11 73.2 132 36.4
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 2.8e-11 72.8 64 53.1
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 3.7e-11 72.4 177 39.0
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 4.8e-11 72.0 68 51.5
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 1.4e-10 70.5 124 41.1
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 3.1e-10 69.3 145 37.2
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 6.9e-10 68.2 125 36.0
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 9.0e-10 67.8 146 36.3
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 1.5e-09 67.0 57 52.6
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 1.5e-09 67.0 142 38.7
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 2.6e-09 66.2 123 35.8
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 4.5e-09 65.5 124 33.9
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 2.9e-08 62.8 131 38.9
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 3.8e-08 62.4 53 60.4


User provided reference genes

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