Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 1.7e-82 309.3 155 100.0
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 3.5e-72 275.0 155 92.3
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 1.6e-56 223.0 157 73.9
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 3.5e-56 221.9 159 73.6
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 1.7e-55 219.5 136 81.6
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 5.1e-55 218.0 147 78.2
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 5.2e-52 208.0 156 67.3
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 5.2e-52 208.0 131 79.4
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 2.0e-51 206.1 127 81.9
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 3.4e-51 205.3 142 73.9
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 5.8e-51 204.5 144 71.5
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 1.3e-50 203.4 146 67.1
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 1.7e-50 203.0 126 81.0
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.7e-50 203.0 126 80.2
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 2.2e-50 202.6 156 66.0
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 3.8e-50 201.8 130 76.9
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 4.9e-50 201.4 129 76.7
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 4.9e-50 201.4 129 77.5
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 1.1e-49 200.3 128 75.0
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.1e-49 200.3 143 72.7
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 1.1e-49 200.3 131 75.6
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.4e-49 199.9 125 78.4
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 1.9e-49 199.5 137 75.9
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 2.4e-49 199.1 127 80.3
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 2.4e-49 199.1 137 73.7
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 4.2e-49 198.4 156 67.3
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 4.2e-49 198.4 131 76.3
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 4.2e-49 198.4 131 76.3
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 7.1e-49 197.6 132 78.0
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 7.1e-49 197.6 144 70.8
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 9.2e-49 197.2 135 74.8
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 1.2e-48 196.8 125 78.4
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.6e-48 196.4 125 77.6
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 2.1e-48 196.1 138 71.7
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 2.1e-48 196.1 129 76.0
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.7e-48 195.7 129 76.0
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 3.5e-48 195.3 155 67.1
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 3.5e-48 195.3 149 67.1
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 3.5e-48 195.3 128 76.6
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 4.6e-48 194.9 130 73.1
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 4.6e-48 194.9 130 73.1
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 7.8e-48 194.1 129 75.2
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 1.0e-47 193.7 125 76.0
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 1.0e-47 193.7 134 73.9
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 1.3e-47 193.4 129 74.4
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 3.0e-47 192.2 131 74.0
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 3.9e-47 191.8 138 69.6
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 3.9e-47 191.8 125 75.2
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 5.1e-47 191.4 127 75.6
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 6.6e-47 191.0 129 73.6
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 1.1e-46 190.3 130 74.6
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 1.5e-46 189.9 126 74.6
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 1.5e-46 189.9 136 72.1
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 1.9e-46 189.5 128 71.1
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 1.9e-46 189.5 132 70.5
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 1.9e-46 189.5 136 72.1
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 1.9e-46 189.5 129 73.6
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 2.5e-46 189.1 125 73.6
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 5.6e-46 188.0 131 71.8
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 7.3e-46 187.6 130 72.3
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 9.6e-46 187.2 125 75.2
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 9.6e-46 187.2 123 75.6
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 1.3e-45 186.8 125 75.2
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 3.6e-45 185.3 125 72.0
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 4.8e-45 184.9 125 74.4
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 4.8e-45 184.9 125 74.4
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 4.8e-45 184.9 124 72.6
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 6.2e-45 184.5 123 72.4
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 1.1e-44 183.7 125 75.2
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 1.4e-44 183.3 121 71.9
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 2.4e-44 182.6 124 74.2
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 4.0e-44 181.8 124 71.8
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 5.3e-44 181.4 128 68.8
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 6.9e-44 181.0 124 73.4
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 6.9e-44 181.0 125 69.6
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 1.2e-43 180.3 124 71.8
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 1.2e-43 180.3 124 73.4
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 7.6e-43 177.6 132 69.7
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 1.3e-42 176.8 127 68.5
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 2.2e-42 176.0 153 60.1
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 1.4e-41 173.3 129 70.5
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 1.9e-41 172.9 124 70.2
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 2.4e-41 172.6 129 69.8
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 2.4e-41 172.6 121 69.4
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 7.1e-41 171.0 124 65.3
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 9.3e-41 170.6 129 69.0
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 1.2e-40 170.2 151 58.3
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 1.2e-40 170.2 132 68.2
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.6e-40 169.9 124 68.5
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 1.6e-40 169.9 126 66.7
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 2.7e-40 169.1 119 70.6
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 4.6e-40 168.3 137 62.0
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 6.0e-40 167.9 131 67.9
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 7.8e-40 167.5 132 66.7
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 3.0e-39 165.6 124 67.7
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 8.7e-39 164.1 132 63.6
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 8.7e-39 164.1 119 68.1
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.1e-38 163.7 125 67.2
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 3.3e-38 162.2 129 60.5
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 2.1e-37 159.5 129 63.6
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 4.0e-36 155.2 124 64.5
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 3.4e-35 152.1 124 62.1
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 3.8e-34 148.7 126 61.9
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 3.8e-34 148.7 127 59.1
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 1.4e-33 146.7 123 61.0
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 2.1e-29 132.9 124 53.2
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 8.1e-29 131.0 123 54.5
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 1.5e-27 126.7 123 54.5
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 4.5e-27 125.2 80 75.0
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 4.9e-26 121.7 123 52.8
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 1.2e-24 117.1 124 51.6
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 6.0e-24 114.8 77 71.4
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 1.0e-23 114.0 130 45.4
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 5.1e-23 111.7 90 58.9
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 2.8e-21 105.9 129 46.5
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 3.1e-20 102.4 138 42.0
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 5.8e-19 98.2 81 56.8
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 1.7e-18 96.7 110 45.5
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.7e-18 96.7 102 51.0
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 5.5e-17 91.7 89 59.6
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 1.0e-15 87.4 120 44.2
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 1.5e-14 83.6 123 41.5
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 5.3e-12 75.1 58 69.0
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 1.8e-07 60.1 90 43.3


User provided reference genes

Program Settings