Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2103 Salvia bowleyana HOM05D012266 ORTHO05D011876 6.8e-146 520.8 289 100.0
SalBow7G0495 Salvia bowleyana HOM05D012266 ORTHO05D011876 9.6e-124 447.2 262 98.9
Oeu021526.1 Olea europaea HOM05D012266 ORTHO05D011876 1.2e-38 164.5 354 39.3
MSTRG.13241 Avicennia marina HOM05D012266 ORTHO05D011876 1.4e-34 151.0 290 45.9
Oeu046855.1 Olea europaea HOM05D012266 ORTHO05D011876 2.0e-33 147.1 355 37.5
MSTRG.16199 Avicennia marina HOM05D012266 ORTHO05D011876 2.1e-30 137.1 353 35.4
Oeu001056.1 Olea europaea HOM05D012266 ORTHO05D011876 4.6e-25 119.4 343 33.5
MSTRG.7455 Avicennia marina HOM05D012266 ORTHO05D011876 2.3e-24 117.1 345 32.5
SalBow8G3146 Salvia bowleyana HOM05D012266 ORTHO05D011876 2.5e-23 113.6 319 38.6
Dinv03635 Davidia involucrata HOM05D009013 ORTHO05D009761 1.6e-22 110.9 377 35.0
Migut.M00961 Erythranthe guttata HOM05D012266 ORTHO05D011876 2.4e-18 97.1 290 36.2
SGA_v2.0_scaffold333G49024 Striga asiatica HOM05D012266 ORTHO05D011876 6.2e-14 82.4 292 30.8
DCAR_003953 Daucus carota HOM05D009013 ORTHO05D009761 1.8e-13 80.9 366 29.0
Sed0006555 Sechium edule HOM05D022667 ORTHO05D009761 3.1e-13 80.1 293 33.1
MELO3C007172.2 Cucumis melo HOM05D022667 ORTHO05D009761 1.5e-12 77.8 298 27.9
CiPaw.10G096600 Carya illinoinensis HOM05D009013 ORTHO05D009761 5.8e-12 75.9 358 27.4
ClCG01G024180 Citrullus lanatus HOM05D022667 ORTHO05D009761 1.3e-11 74.7 295 29.2
CsaV3_6G051330 Cucumis sativus L. HOM05D022667 ORTHO05D009761 1.7e-11 74.3 301 28.9
SGA_v2.0_scaffold123G33463 Striga asiatica HOM05D012266 ORTHO05D011876 8.4e-11 72.0 279 30.8
QL05p060720 Quercus lobata HOM05D009013 ORTHO05D009761 3.2e-10 70.1 375 29.6
Nitab4.5_0001283g0020 Nicotiana tabacum HOM05D012094 ORTHO05D011876 9.3e-10 68.6 383 31.3
Nitab4.5_0000206g0120 Nicotiana tabacum HOM05D012094 ORTHO05D011876 1.2e-09 68.2 173 32.9
Migut.H01393 Erythranthe guttata HOM05D012266 ORTHO05D011876 2.7e-09 67.0 290 29.0
Sopen03g001860 Solanum pennellii HOM05D012094 ORTHO05D011876 2.7e-09 67.0 290 26.9
Hma1.2p1_0015F.1_g010420 Hydrangea macrophylla HOM05D009013 ORTHO05D009761 3.5e-09 66.6 296 33.8
Nitab4.5_0001826g0030 Nicotiana tabacum HOM05D012094 ORTHO05D011876 4.6e-09 66.2 124 36.3
Atru.chr10.1414 Acer truncatum HOM05D009852 ORTHO05D009761 6.0e-09 65.9 302 32.1
Sed0023686 Sechium edule HOM05D022667 ORTHO05D009761 7.8e-09 65.5 296 28.4
Gorai.010G164100 Gossypium raimondii HOM05D009852 ORTHO05D009761 1.7e-08 64.3 325 28.3
Glyma.15G195700 Glycine max HOM05D009013 ORTHO05D009761 3.0e-08 63.5 329 33.1
Lj4g0005206 Lotus japonicus HOM05D009013 ORTHO05D009761 3.0e-08 63.5 351 24.8
CSS0045433 Camellia sinensis var. sinensis HOM05D014645 ORTHO05D009761 3.9e-08 63.2 472 26.9
Nitab4.5_0003714g0090 Nicotiana tabacum HOM05D012094 ORTHO05D011876 3.9e-08 63.2 91 40.7
Actinidia39545 Actinidia chinensis HOM05D014645 ORTHO05D009761 5.1e-08 62.8 87 37.9
Phvul.009G214600 Phaseolus vulgaris HOM05D009013 ORTHO05D009761 6.6e-08 62.4 338 28.1
DCAR_007913 Daucus carota HOM05D009013 ORTHO05D009761 1.1e-07 61.6 293 27.0
TWI09G1113 Tripterygium wilfordii HOM05D009852 ORTHO05D009761 1.1e-07 61.6 368 26.4
Actinidia27190 Actinidia chinensis HOM05D014645 ORTHO05D009761 1.5e-07 61.2 87 37.9
Haze_05479 Corylus avellana HOM05D009013 ORTHO05D009761 1.5e-07 61.2 369 27.9
Glyma.05G164200 Glycine max HOM05D009013 ORTHO05D009761 1.5e-07 61.2 304 28.9
Actinidia19483 Actinidia chinensis HOM05D014645 ORTHO05D009761 2.5e-07 60.5 145 37.2
Actinidia07666 Actinidia chinensis HOM05D014645 ORTHO05D009761 3.3e-07 60.1 137 35.8
Ciclev10017480m.g Citrus clementina HOM05D009852 ORTHO05D009761 3.3e-07 60.1 336 28.0
DCAR_027956 Daucus carota HOM05D014645 ORTHO05D009761 4.3e-07 59.7 127 40.2
Dinv32301 Davidia involucrata HOM05D009013 ORTHO05D009761 4.3e-07 59.7 141 39.0
Gohir.D06G140600 Gossypium hirsutum HOM05D009852 ORTHO05D009761 4.3e-07 59.7 326 28.2
Peaxi162Scf00121g01412 Petunia axillaris HOM05D012094 ORTHO05D011876 4.3e-07 59.7 293 27.0
Glyma.09G085700 Glycine max HOM05D009013 ORTHO05D009761 1.3e-06 58.2 348 28.7
PGSC0003DMG400003088 Solanum tuberosum HOM05D012094 ORTHO05D011876 2.8e-06 57.0 428 27.8
VMungo1309G2255 Vigna mungo HOM05D009013 ORTHO05D009761 2.8e-06 57.0 342 26.6
CiPaw.09G129900 Carya illinoinensis HOM05D009013 ORTHO05D009761 6.2e-06 55.8 145 35.2


User provided reference genes

Program Settings