Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 0.0e+00 1386.3 709 100.0
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 1.5e-295 1019.2 707 72.6
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 1.9e-282 975.7 707 70.3
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 7.0e-261 904.0 711 65.7
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 5.0e-259 897.9 715 64.6
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 1.6e-257 892.9 705 65.7
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 1.2e-255 886.7 703 63.7
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 6.6e-251 870.9 707 64.1
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 3.3e-250 868.6 711 64.1
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 3.3e-250 868.6 710 62.8
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 9.5e-250 867.1 702 63.4
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 8.0e-249 864.0 707 62.2
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 1.5e-247 859.8 717 62.8
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 2.7e-244 849.0 686 65.0
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 5.1e-243 844.7 705 62.4
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 5.1e-243 844.7 697 62.4
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 7.3e-242 840.9 705 62.0
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 1.1e-240 837.0 708 60.9
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 3.1e-240 835.5 704 61.8
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 4.0e-240 835.1 715 60.7
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 8.9e-240 833.9 706 61.6
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 3.4e-239 832.0 715 60.0
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 6.4e-238 827.8 709 60.4
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 4.6e-236 821.6 713 59.9
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 2.3e-235 819.3 706 60.1
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 5.1e-235 818.1 708 60.9
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 1.1e-234 817.0 705 59.9
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 5.6e-234 814.7 688 61.8
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 1.8e-232 809.7 616 66.7
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 4.0e-232 808.5 649 62.7
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 2.6e-231 805.8 704 59.5
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 2.6e-231 805.8 708 59.5
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 2.6e-231 805.8 718 58.8
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 2.2e-230 802.7 696 60.9
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 6.4e-230 801.2 733 58.3
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 1.1e-229 800.4 703 59.5
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 1.9e-229 799.7 697 61.1
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 4.2e-229 798.5 705 58.6
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 1.2e-228 797.0 704 58.2
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 1.2e-228 797.0 697 60.8
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 3.5e-228 795.4 707 57.0
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 7.8e-228 794.3 707 59.0
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 7.8e-228 794.3 615 65.4
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 1.7e-227 793.1 719 58.3
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 5.1e-227 791.6 707 57.1
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 1.9e-226 789.6 706 57.5
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 4.3e-226 788.5 706 57.4
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 5.6e-226 788.1 702 59.3
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 2.8e-225 785.8 733 55.3
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 6.2e-225 784.6 704 57.8
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.4e-224 783.5 753 54.7
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 1.8e-224 783.1 674 61.4
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 3.1e-224 782.3 699 58.1
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 6.9e-224 781.2 713 58.3
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 2.2e-222 776.2 731 55.5
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.1e-221 773.9 707 57.3
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 1.1e-221 773.9 715 56.8
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 7.1e-221 771.2 710 56.3
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.2e-220 770.4 743 53.7
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 1.2e-220 770.4 709 57.5
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 4.6e-220 768.5 706 56.2
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 7.8e-220 767.7 600 65.0
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 1.0e-219 767.3 712 57.4
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 2.3e-219 766.1 702 56.6
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 5.1e-219 765.0 720 56.7
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 6.6e-219 764.6 703 56.8
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.1e-218 763.8 730 54.1
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 2.5e-218 762.7 713 55.8
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 2.5e-218 762.7 683 58.9
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 4.3e-218 761.9 655 61.5
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 9.6e-218 760.8 716 57.0
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 2.4e-216 756.1 689 56.7
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 1.5e-215 753.4 708 55.6
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 2.9e-214 749.2 703 57.6
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 6.4e-214 748.0 696 56.5
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 3.2e-213 745.7 653 58.7
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 1.6e-209 733.4 705 55.0
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 3.7e-209 732.3 685 55.6
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 4.8e-209 731.9 704 55.7
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 8.1e-209 731.1 704 55.8
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 4.0e-208 728.8 704 55.5
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 9.0e-208 727.6 704 55.3
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 3.4e-207 725.7 704 55.0
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 3.4e-207 725.7 704 54.8
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 4.5e-207 725.3 704 55.7
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 7.6e-207 724.5 704 54.8
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 7.6e-207 724.5 705 54.5
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 1.7e-206 723.4 704 55.3
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 4.9e-206 721.8 781 52.9
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 1.4e-205 720.3 708 54.9
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 2.5e-205 719.5 684 53.8
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 6.0e-204 714.9 704 54.8
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 1.3e-203 713.8 706 54.4
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 7.4e-202 708.0 647 56.1
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 9.0e-200 701.0 709 53.2
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 1.5e-199 700.3 732 53.6
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 1.5e-191 673.7 607 57.5
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 1.0e-187 661.0 708 49.4
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 5.1e-187 658.7 716 50.3
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.1e-186 657.5 597 59.6
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 1.4e-181 640.6 633 54.7
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 2.6e-178 629.8 703 51.4
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 4.7e-172 609.0 703 49.6
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 1.0e-166 591.3 514 60.5
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 3.8e-166 589.3 609 50.6
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 5.4e-152 542.3 524 57.1
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 5.0e-150 535.8 407 68.3
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 2.8e-148 530.0 638 49.2
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 1.6e-135 487.6 501 53.1
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 7.1e-128 462.2 421 58.9
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 5.1e-126 456.1 708 43.4
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 1.1e-115 421.8 767 37.0
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 2.4e-115 420.6 740 36.2
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 2.0e-98 364.4 706 35.0
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 2.3e-86 324.3 491 40.1
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 1.5e-85 321.6 330 52.7
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 6.9e-83 312.8 333 49.8
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 2.4e-75 287.7 301 54.8
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.5e-61 241.9 245 53.1
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 7.4e-61 239.6 285 46.0
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 5.0e-49 200.3 249 43.8
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 1.8e-43 181.8 430 30.7
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 3.8e-41 174.1 290 41.0
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 1.7e-36 158.7 159 49.1
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 2.7e-34 151.4 129 60.5
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 4.1e-27 127.5 565 26.0
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 5.4e-27 127.1 155 45.8
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 7.0e-27 126.7 88 76.1
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 3.3e-16 91.3 63 76.2
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 1.2e-15 89.4 293 29.7
BolC2t06938H Brassica oleracea HOM05D005666 ORTHO05D043081 1.1e-11 76.3 64 59.4
Thecc.05G064500 Theobroma cacao HOM05D005666 ORTHO05D007183 2.3e-09 68.6 101 35.6
FvH4_6g51172 Fragaria vesca HOM05D005666 ORTHO05D007183 4.0e-06 57.8 52 63.5
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 6.8e-06 57.0 73 42.5


User provided reference genes

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