Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 5.8e-56 220.7 116 100.0
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 2.6e-48 195.3 116 84.5
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 4.5e-48 194.5 116 83.6
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 5.0e-47 191.0 115 84.3
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 3.6e-45 184.9 116 78.4
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 5.1e-44 181.0 114 78.1
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 1.5e-43 179.5 116 76.7
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 2.8e-42 175.3 111 78.4
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 4.8e-42 174.5 111 80.2
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 4.8e-42 174.5 111 80.2
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 2.4e-41 172.2 111 79.3
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 6.9e-41 170.6 112 76.8
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 9.1e-41 170.2 112 76.8
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 9.1e-41 170.2 110 78.2
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 1.2e-40 169.9 117 71.8
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 1.5e-40 169.5 111 79.3
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 5.9e-40 167.5 112 75.9
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 7.7e-40 167.2 117 70.9
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.2e-39 165.6 111 76.6
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 2.9e-39 165.2 116 71.6
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.9e-39 165.2 111 76.6
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 8.5e-39 163.7 112 73.2
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 1.1e-38 163.3 117 70.9
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 1.4e-38 162.9 112 73.2
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 1.9e-38 162.5 117 69.2
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 2.5e-38 162.2 113 73.5
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 5.5e-38 161.0 111 73.9
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 7.2e-38 160.6 114 70.2
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 7.2e-38 160.6 114 68.4
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 7.2e-38 160.6 112 73.2
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 9.4e-38 160.2 111 72.1
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 1.2e-37 159.8 109 74.3
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.6e-37 159.5 112 71.4
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 2.1e-37 159.1 113 70.8
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 2.1e-37 159.1 109 74.3
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 3.6e-37 158.3 114 68.4
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 4.7e-37 157.9 116 69.0
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 4.7e-37 157.9 112 70.5
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 6.1e-37 157.5 113 71.7
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 6.1e-37 157.5 113 71.7
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 6.1e-37 157.5 113 71.7
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 6.1e-37 157.5 113 71.7
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 6.1e-37 157.5 113 71.7
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 6.1e-37 157.5 112 71.4
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 7.9e-37 157.1 112 72.3
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 7.9e-37 157.1 113 69.9
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 7.9e-37 157.1 110 71.8
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.0e-36 156.8 113 70.8
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 1.4e-36 156.4 111 71.2
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 1.4e-36 156.4 110 71.8
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 1.8e-36 156.0 116 67.2
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 1.8e-36 156.0 112 69.6
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 2.3e-36 155.6 113 71.7
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 3.0e-36 155.2 113 69.0
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 3.9e-36 154.8 115 66.1
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 6.7e-36 154.1 111 67.6
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 8.8e-36 153.7 113 68.1
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 1.1e-35 153.3 113 69.9
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 1.1e-35 153.3 113 69.9
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 2.0e-35 152.5 110 70.9
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 2.0e-35 152.5 110 71.8
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 3.3e-35 151.8 117 64.1
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 3.3e-35 151.8 112 69.6
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 9.7e-35 150.2 113 67.3
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 1.3e-34 149.8 117 65.0
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 2.2e-34 149.1 113 67.3
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 3.7e-34 148.3 106 70.8
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 4.8e-34 147.9 99 75.8
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 4.8e-34 147.9 111 68.5
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 6.3e-34 147.5 111 66.7
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 6.3e-34 147.5 109 67.0
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 6.3e-34 147.5 112 66.1
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 1.8e-33 146.0 111 66.7
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 3.1e-33 145.2 111 66.7
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 5.3e-33 144.4 112 62.5
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 5.3e-33 144.4 111 65.8
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 7.0e-33 144.1 110 67.3
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 9.1e-33 143.7 106 66.0
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 1.5e-32 142.9 109 64.2
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 2.6e-32 142.1 117 63.2
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 4.5e-32 141.4 134 57.5
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 4.5e-32 141.4 111 64.9
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 1.0e-31 140.2 113 62.8
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 1.0e-31 140.2 111 64.0
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 6.5e-31 137.5 97 73.2
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 2.5e-30 135.6 105 66.7
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 8.8e-28 127.1 82 75.6
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 8.8e-28 127.1 83 73.5
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 1.5e-27 126.3 89 70.8
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 3.3e-27 125.2 172 43.6
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 3.3e-27 125.2 89 71.9
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 9.7e-27 123.6 88 70.5
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 3.7e-26 121.7 105 60.0
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 6.3e-26 120.9 89 68.5
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 8.2e-26 120.6 100 63.0
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 8.2e-26 120.6 89 68.5
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 8.2e-26 120.6 85 70.6
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 1.4e-25 119.8 89 68.5
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 1.4e-25 119.8 90 65.6
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.4e-25 119.0 87 70.1
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 3.1e-25 118.6 85 69.4
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 1.2e-24 116.7 83 68.7
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 5.9e-24 114.4 115 55.7
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 6.5e-23 110.9 91 65.9
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 1.1e-22 110.2 80 66.2
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 9.4e-22 107.1 87 60.9
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 3.6e-21 105.1 79 68.4
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 2.0e-19 99.4 84 57.1
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 6.3e-18 94.4 64 71.9
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 1.6e-16 89.7 115 46.1
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 2.0e-16 89.4 108 47.2
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 2.2e-15 85.9 67 59.7
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.5e-14 82.4 53 71.7
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 3.6e-13 78.6 77 51.9
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 4.7e-13 78.2 49 73.5
AagrBONN_evm.TU.Sc2ySwM_344.4448 Anthoceros agrestis HOM05D007073 ORTHO05D008855 1.8e-12 76.3 113 41.6
BcaC05g27114 Brassica carinata HOM05D007073 ORTHO05D008855 1.7e-10 69.7 108 44.4
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 4.5e-08 61.6 53 58.5


User provided reference genes

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