Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G1875 Salvia bowleyana HOM05D027784 ORTHO05D010674 0.0e+00 4134.3 2167 100.0
MSTRG.1096 Avicennia marina HOM05D027784 ORTHO05D010674 6.4e-172 610.1 2425 30.1
Migut.C00977 Erythranthe guttata HOM05D027784 ORTHO05D010674 1.9e-83 316.2 1787 27.0
SGA_v2.0_scaffold108G30881 Striga asiatica HOM05D001241 ORTHO05D010674 1.4e-62 246.9 1960 25.5
Oeu051274.3 Olea europaea HOM05D027784 ORTHO05D010674 1.4e-54 220.3 2442 24.2
CSS0012606 Camellia sinensis var. sinensis HOM05D033310 ORTHO05D010674 1.8e-12 80.5 86 48.8
Aa31LG4G6810 Aethionema arabicum HOM05D010491 ORTHO05D012559 1.5e-11 77.4 126 42.9
Gohir.A05G244401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 2.0e-11 77.0 528 27.5
Peaxi162Scf00079g00245 Petunia axillaris HOM05D011323 ORTHO05D010674 3.3e-11 76.3 397 29.0
Nitab4.5_0001344g0010 Nicotiana tabacum HOM05D011323 ORTHO05D010674 4.3e-11 75.9 320 28.8
Sp5g31880 Schrenkiella parvula HOM05D010491 ORTHO05D012559 4.3e-11 75.9 110 45.5
CARHR070280 Cardamine hirsuta HOM05D010491 ORTHO05D012559 2.8e-10 73.2 331 28.1
Nitab4.5_0001187g0020 Nicotiana tabacum HOM05D011323 ORTHO05D010674 8.2e-10 71.6 376 29.0
EL10Ac1g01580 Beta vulgaris HOM05D018884 ORTHO05D010674 3.1e-09 69.7 84 46.4
Nn1g06053 Nelumbo nucifera HOM05D011323 ORTHO05D010674 3.1e-09 69.7 272 30.9
Cc10_g15040 Coffea canephora HOM05D011323 ORTHO05D010674 4.1e-09 69.3 487 26.5
Lj4C698G20 Lonicera japonica HOM05D011323 ORTHO05D010674 9.1e-09 68.2 499 26.5
AUR62040588 Chenopodium quinoa HOM05D018884 ORTHO05D010674 1.2e-08 67.8 99 42.4
Dinv25882 Davidia involucrata HOM05D016043 ORTHO05D010674 1.2e-08 67.8 179 34.1
Atru.chr13.2071 Acer truncatum HOM05D036810 ORTHO05D030759 1.5e-08 67.4 559 24.7
AUR62026679 Chenopodium quinoa HOM05D018884 ORTHO05D010674 1.5e-08 67.4 132 35.6
CANSAT25G2759 Cannabis sativa HOM05D013130 ORTHO05D010674 4.5e-08 65.9 218 30.7
Gohir.D05G245401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 4.5e-08 65.9 518 27.6
PGR044G2651 Punica granatum HOM05D012764 ORTHO05D010674 5.9e-08 65.5 435 27.6
AL2G36890 Arabidopsis lyrata HOM05D010491 ORTHO05D012559 7.7e-08 65.1 323 28.5
arahy.Tifrunner.gnm1.ann1.UU4M73 Arachis hypogaea HOM05D053442 ORTHO05D010674 7.7e-08 65.1 54 59.3
A07p42390 Brassica napus HOM05D010491 ORTHO05D012559 1.0e-07 64.7 336 29.8
Dinv41064 Davidia involucrata HOM05D016043 ORTHO05D015789 1.3e-07 64.3 357 27.5
Gorai.009G255200 Gossypium raimondii HOM05D013130 ORTHO05D022454 1.7e-07 63.9 540 27.2
Potri.002G066450 Populus trichocarpa HOM05D015223 ORTHO05D037420 3.8e-07 62.8 545 26.2
Thecc.08G155200 Theobroma cacao HOM05D013130 ORTHO05D022454 8.5e-07 61.6 548 24.8
BraA07t31765Z Brassica rapa HOM05D010491 ORTHO05D012559 1.4e-06 60.8 378 27.8
DCAR_001148 Daucus carota HOM05D033900 ORTHO05D010674 2.5e-06 60.1 139 33.1
arahy.Tifrunner.gnm1.ann1.R835TB Arachis hypogaea HOM05D053442 ORTHO05D010674 3.2e-06 59.7 121 35.5
Dinv42169 Davidia involucrata HOM05D023276 ORTHO05D026395 3.2e-06 59.7 38 68.4
BcaB02g07074 Brassica carinata HOM05D010491 ORTHO05D012559 9.4e-06 58.2 44 61.4
BcaC08g45512 Brassica carinata HOM05D010491 ORTHO05D012559 9.4e-06 58.2 40 65.0
C06p31820 Brassica napus HOM05D010491 ORTHO05D012559 9.4e-06 58.2 40 65.0
BolC6t38310H Brassica oleracea HOM05D010491 ORTHO05D012559 9.4e-06 58.2 40 65.0


User provided reference genes

Program Settings