Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G1610 Salvia bowleyana HOM05D003443 ORTHO05D009887 6.6e-240 833.6 404 100.0
SalBow7G0745 Salvia bowleyana HOM05D003443 ORTHO05D009887 3.8e-235 817.8 408 97.8
MSTRG.1462 Avicennia marina HOM05D003443 ORTHO05D009887 1.6e-164 583.2 406 69.2
Migut.C01151 Erythranthe guttata HOM05D003443 ORTHO05D009887 1.6e-164 583.2 396 71.0
SGA_v2.0_scaffold52G18985 Striga asiatica HOM05D003443 ORTHO05D009887 1.2e-132 477.2 416 59.6
Lsat_1_v5_gn_1_8320 Lactuca sativa HOM05D003443 ORTHO05D009887 2.3e-115 419.9 391 52.4
RhsimUnG0094800 Rhododendron simsii HOM05D003443 ORTHO05D009887 7.6e-111 404.8 461 46.0
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.1e-109 401.0 403 51.4
HanXRQChr04g0111631 Helianthus annuus HOM05D003443 ORTHO05D009887 6.0e-108 395.2 398 50.5
GSVIVG01008903001 Vitis vinifera HOM05D003443 ORTHO05D009887 6.0e-108 395.2 431 48.0
QL09p035320 Quercus lobata HOM05D003443 ORTHO05D009887 7.4e-106 388.3 437 46.2
Prupe.1G501800 Prunus persica HOM05D003443 ORTHO05D009887 2.4e-104 383.3 439 47.4
ClCG11G015590 Citrullus lanatus HOM05D003443 ORTHO05D009887 1.2e-103 380.9 406 45.3
DCAR_003542 Daucus carota HOM05D003443 ORTHO05D009887 1.2e-103 380.9 409 46.5
Atru.chr13.1406 Acer truncatum HOM05D003443 ORTHO05D009887 4.5e-103 379.0 430 46.7
Manes.02G161000 Manihot esculenta HOM05D003443 ORTHO05D009887 5.8e-103 378.6 421 46.3
Nitab4.5_0002816g0090 Nicotiana tabacum HOM05D003443 ORTHO05D009887 7.6e-103 378.3 432 46.3
Nn5g28161 Nelumbo nucifera HOM05D003443 ORTHO05D009887 3.8e-102 375.9 423 46.6
CANSAT25G3703 Cannabis sativa HOM05D003443 ORTHO05D009887 1.1e-101 374.4 422 46.0
TAR628G0851 Trochodendron aralioides HOM05D003443 ORTHO05D009887 1.9e-101 373.6 426 45.8
Sed0010337 Sechium edule HOM05D003443 ORTHO05D009887 2.5e-101 373.2 402 45.5
Thecc.08G121100 Theobroma cacao HOM05D003443 ORTHO05D009887 3.2e-101 372.9 424 45.8
TWI56G0082 Tripterygium wilfordii HOM05D003443 ORTHO05D009887 9.3e-101 371.3 421 45.8
CAN.G48.26 Capsicum annuum HOM05D003443 ORTHO05D009887 2.1e-100 370.2 429 45.2
FvH4_2g26511 Fragaria vesca HOM05D003443 ORTHO05D009887 3.9e-99 365.9 433 47.1
Oeu050896.1 Olea europaea HOM05D003443 ORTHO05D009887 3.9e-99 365.9 432 47.7
PGSC0003DMG400014817 Solanum tuberosum HOM05D003443 ORTHO05D009887 3.3e-98 362.8 430 45.1
Gohir.A05G233300 Gossypium hirsutum HOM05D003443 ORTHO05D009887 2.8e-97 359.8 425 44.2
MD08G1168100 Malus domestica HOM05D003443 ORTHO05D009887 3.7e-97 359.4 439 45.1
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 4.8e-97 359.0 429 46.9
Eucgr.F03767 Eucalyptus grandis HOM05D003443 ORTHO05D009887 1.1e-96 357.8 431 44.3
RcHm_v2.0_Chr6g0295331 Rosa chinensis HOM05D003443 ORTHO05D009887 1.8e-96 357.1 440 46.1
Hund16841 Selenicereus undatus HOM05D003443 ORTHO05D009887 2.4e-96 356.7 419 45.8
Solyc03g093210.3 Solanum lycopersicum HOM05D003443 ORTHO05D009887 2.4e-96 356.7 452 43.4
CsaV3_4G028430 Cucumis sativus L. HOM05D003443 ORTHO05D009887 6.9e-96 355.1 396 43.4
Gorai.009G244000 Gossypium raimondii HOM05D003443 ORTHO05D009887 1.5e-95 354.0 426 43.2
Nitab4.5_0010023g0010 Nicotiana tabacum HOM05D003443 ORTHO05D009887 3.2e-93 346.3 510 40.4
MELO3C010459.2 Cucumis melo HOM05D003443 ORTHO05D009887 4.2e-93 345.9 413 43.6
Lalb_Chr10g0101921 Lupinus albus HOM05D003443 ORTHO05D009887 1.2e-92 344.4 435 43.9
Sabra05G0132100 Salix brachista HOM05D003443 ORTHO05D009887 1.2e-92 344.4 440 43.0
QL09p036517 Quercus lobata HOM05D003443 ORTHO05D009887 1.0e-91 341.3 406 44.6
Lj7C333G3 Lonicera japonica HOM05D003443 ORTHO05D009887 1.4e-91 340.9 388 47.4
Psat2g078480 Pisum sativum HOM05D003443 ORTHO05D009887 1.4e-91 340.9 430 42.1
Medtr5g059070 Medicago truncatula HOM05D003443 ORTHO05D009887 7.4e-90 335.1 433 42.7
VMungo0647G1328 Vigna mungo HOM05D003443 ORTHO05D009887 7.4e-90 335.1 429 42.7
Lj1g0008620 Lotus japonicus HOM05D003443 ORTHO05D009887 6.3e-89 332.0 428 41.6
arahy.Tifrunner.gnm1.ann1.5F0RSX Arachis hypogaea HOM05D003443 ORTHO05D009887 3.4e-87 326.2 438 41.1
ECA247G0446 Erigeron canadensis HOM05D003443 ORTHO05D009887 1.0e-86 324.7 362 44.8
arahy.Tifrunner.gnm1.ann1.JR3K98 Arachis hypogaea HOM05D003443 ORTHO05D009887 1.7e-86 323.9 438 41.1
Ca_03725_v3 Cicer arietinum L. HOM05D003443 ORTHO05D009887 1.7e-86 323.9 431 41.5
Phvul.008G165600 Phaseolus vulgaris HOM05D003443 ORTHO05D009887 5.5e-85 318.9 431 40.8
Actinidia25684 Actinidia chinensis HOM05D003443 ORTHO05D009887 3.0e-83 313.2 309 52.1
Haze_00482 Corylus avellana HOM05D003443 ORTHO05D009887 6.7e-83 312.0 395 43.8
FAN27G2831 Fragaria x ananassa HOM05D003443 ORTHO05D009887 1.5e-82 310.8 399 44.4
Duzib093G0763 Durio zibethinus HOM05D003443 ORTHO05D009887 5.5e-77 292.4 357 43.1
Sc01g0001370 Simmondsia chinensis HOM05D003443 ORTHO05D009887 3.6e-76 289.7 351 42.7
TPR.G8502 Trifolium pratense HOM05D003443 ORTHO05D009887 9.7e-74 281.6 397 40.1
EL10Ac1g00011 Beta vulgaris HOM05D003443 ORTHO05D009887 1.8e-72 277.3 429 38.7
AUR62004719 Chenopodium quinoa HOM05D003443 ORTHO05D009887 1.6e-71 274.2 373 41.0
Glyma.14G162900 Glycine max HOM05D003443 ORTHO05D009887 7.7e-71 271.9 370 41.4
vmacro00815 Vaccinium macrocarpon HOM05D003443 ORTHO05D009887 7.7e-71 271.9 452 37.2
Peaxi162Scf00241g00037 Petunia axillaris HOM05D003443 ORTHO05D009887 5.5e-69 265.8 447 37.6
AUR62023638 Chenopodium quinoa HOM05D003443 ORTHO05D009887 6.3e-65 252.3 366 39.3
Medtr5g459020 Medicago truncatula HOM05D003443 ORTHO05D009887 6.5e-62 242.3 345 40.9
Cc10_g11010 Coffea canephora HOM05D003443 ORTHO05D009887 1.4e-59 234.6 273 43.6
MBI06_g02575_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 2.8e-57 226.9 417 35.7
Sopen03g024010 Solanum pennellii HOM05D003443 ORTHO05D009887 5.9e-55 219.2 324 40.1
Potri.005G174900 Populus trichocarpa HOM05D003443 ORTHO05D009887 1.0e-54 218.4 421 33.0
Aqoxy5G02443 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 9.5e-53 211.8 252 44.8
Actinidia29454 Actinidia chinensis HOM05D003443 ORTHO05D009887 6.8e-51 205.7 211 51.7
Cc10_g11020 Coffea canephora HOM05D003443 ORTHO05D009887 8.0e-44 182.2 169 49.7
Gohir.D05G235701 Gossypium hirsutum HOM05D003443 ORTHO05D009887 1.8e-43 181.0 207 44.0
MBI06_g35594_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 8.3e-41 172.2 200 44.0
ATR0684G011 Amborella trichopoda HOM05D003443 ORTHO05D009887 1.2e-39 168.3 261 35.2
Os04g0450500 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D009887 2.1e-31 141.0 251 32.7
MBI06_g44274_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 6.2e-28 129.4 311 29.9
Migut.K01194 Erythranthe guttata HOM05D003443 ORTHO05D009887 7.1e-24 115.9 182 37.4
Lj7E334T0 Lonicera japonica HOM05D003443 ORTHO05D009887 3.0e-22 110.5 86 58.1
PGSC0003DMG400021471 Solanum tuberosum HOM05D003443 ORTHO05D009887 1.3e-17 95.1 85 51.8
SalBow4G2112 Salvia bowleyana HOM05D029231 ORTHO05D009887 2.9e-17 94.0 45 95.6
COL.COLO4_12190 Corchorus olitorius HOM05D003443 ORTHO05D009887 7.1e-16 89.4 70 51.4
Aqoxy5G02442 Aquilegia oxysepala HOM05D003443 ORTHO05D009887 1.6e-15 88.2 142 39.4
SEGI_24688 Sequoiadendron giganteum HOM05D003443 ORTHO05D009887 2.8e-12 77.4 181 29.8
MBI06_g35595_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D009887 8.1e-12 75.9 129 32.6
Hma1.2p1_0248F.1_g102080 Hydrangea macrophylla HOM05D003443 ORTHO05D009887 1.2e-07 62.0 36 75.0


User provided reference genes

Program Settings