Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G1441 Salvia bowleyana HOM05D010484 ORTHO05D010242 7.1e-111 404.1 222 100.0
MSTRG.12891 Avicennia marina HOM05D010484 ORTHO05D001329 2.0e-49 199.9 303 45.9
SGA_v2.0_scaffold70G23695 Striga asiatica HOM05D010484 ORTHO05D010242 2.3e-45 186.4 287 45.6
Migut.H01963 Erythranthe guttata HOM05D010484 ORTHO05D010242 6.2e-38 161.8 303 40.9
Oeu051092.1 Olea europaea HOM05D010484 ORTHO05D010242 7.5e-36 154.8 270 41.1
SGA_v2.0_scaffold130G34346 Striga asiatica HOM05D010484 ORTHO05D001329 7.8e-33 144.8 319 38.6
Hma1.2p1_0313F.1_g121690 Hydrangea macrophylla HOM05D010484 ORTHO05D001329 4.0e-29 132.5 305 36.1
Dinv20212 Davidia involucrata HOM05D001501 ORTHO05D001329 2.2e-27 126.7 281 34.9
Cc05_g11620 Coffea canephora HOM05D010484 ORTHO05D010242 8.4e-27 124.8 292 37.0
MSTRG.15244 Avicennia marina HOM05D010484 ORTHO05D010242 7.8e-25 118.2 258 38.0
Nitab4.5_0000831g0120 Nicotiana tabacum HOM05D010484 ORTHO05D010242 4.3e-23 112.5 305 36.1
Nitab4.5_0000246g0060 Nicotiana tabacum HOM05D010484 ORTHO05D010242 1.2e-20 104.4 303 35.6
unitig_747.g21580 Utricularia gibba HOM05D010484 ORTHO05D010242 6.4e-19 98.6 249 33.3
Duzib213G0990 Durio zibethinus HOM05D001501 ORTHO05D001329 1.1e-18 97.8 322 30.1
Lsat_1_v5_gn_5_127461 Lactuca sativa HOM05D016023 ORTHO05D010242 2.4e-18 96.7 252 34.9
Actinidia35237 Actinidia chinensis HOM05D001501 ORTHO05D001329 1.2e-17 94.4 272 33.8
SalBow8G4768 Salvia bowleyana HOM05D010484 ORTHO05D010242 1.2e-17 94.4 268 39.2
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 3.5e-17 92.8 272 32.0
Nn1g04269 Nelumbo nucifera HOM05D001501 ORTHO05D001329 1.0e-16 91.3 274 33.9
Peaxi162Scf00069g01925 Petunia axillaris HOM05D010484 ORTHO05D010242 1.0e-16 91.3 320 32.8
Solyc07g062740.4 Solanum lycopersicum HOM05D010484 ORTHO05D010242 1.3e-16 90.9 190 41.6
Sopen07g030970 Solanum pennellii HOM05D010484 ORTHO05D010242 3.9e-16 89.4 190 41.1
Atru.chr2.2385 Acer truncatum HOM05D008621 ORTHO05D010242 1.1e-15 87.8 337 30.6
PGSC0003DMG400012438 Solanum tuberosum HOM05D010484 ORTHO05D010242 1.5e-15 87.4 187 39.6
Gohir.A01G060500 Gossypium hirsutum HOM05D001501 ORTHO05D001329 3.3e-15 86.3 321 29.0
Rhsim04G0022900 Rhododendron simsii HOM05D010484 ORTHO05D010242 5.6e-15 85.5 260 31.2
Gorai.002G066500 Gossypium raimondii HOM05D001501 ORTHO05D001329 7.3e-15 85.1 319 30.7
HanXRQChr10g0302501 Helianthus annuus HOM05D016023 ORTHO05D010242 1.6e-14 84.0 194 37.1
Oeu025352.2 Olea europaea HOM05D001501 ORTHO05D001329 1.6e-14 84.0 187 38.0
Thecc.07G099300 Theobroma cacao HOM05D001501 ORTHO05D001329 6.2e-14 82.0 327 29.7
Gohir.D01G047000 Gossypium hirsutum HOM05D001501 ORTHO05D001329 1.4e-13 80.9 320 30.3
Ciclev10010201m.g Citrus clementina HOM05D008621 ORTHO05D001329 1.8e-13 80.5 329 29.2
Eucgr.F03292 Eucalyptus grandis HOM05D001501 ORTHO05D001329 1.8e-13 80.5 335 30.7
QL08p023599 Quercus lobata HOM05D001501 ORTHO05D001329 3.1e-13 79.7 331 27.2
Cpa.g.sc80.10 Carica papaya HOM05D008621 ORTHO05D010242 4.0e-13 79.3 309 31.1
Haze_09384 Corylus avellana HOM05D001501 ORTHO05D001329 4.0e-13 79.3 301 30.6
ECA234G3280 Erigeron canadensis HOM05D016023 ORTHO05D010242 5.3e-13 79.0 322 29.2
HanXRQChr10g0317071 Helianthus annuus HOM05D016023 ORTHO05D010242 6.9e-13 78.6 146 38.4
SGA_v2.0_scaffold34G13793 Striga asiatica HOM05D010484 ORTHO05D010242 6.9e-13 78.6 203 34.5
HanXRQChr10g0317081 Helianthus annuus HOM05D016023 ORTHO05D010242 1.2e-12 77.8 157 36.9
FAN21G4066 Fragaria x ananassa HOM05D001501 ORTHO05D001329 5.8e-12 75.5 296 30.4
Actinidia18779 Actinidia chinensis HOM05D010484 ORTHO05D001329 7.6e-12 75.1 284 27.8
CSS0041099 Camellia sinensis var. sinensis HOM05D001501 ORTHO05D001329 9.9e-12 74.7 224 34.8
CANSAT35G0828 Cannabis sativa HOM05D001501 ORTHO05D001329 2.2e-11 73.6 311 28.9
RcHm_v2.0_Chr5g0032271 Rosa chinensis HOM05D001501 ORTHO05D001329 2.9e-11 73.2 296 30.1
BraA05t22253Z Brassica rapa HOM05D008621 ORTHO05D010242 3.8e-11 72.8 190 33.2
HanXRQChr13g0391171 Helianthus annuus HOM05D016023 ORTHO05D010242 3.8e-11 72.8 160 36.9
Prupe.4G173500 Prunus persica HOM05D001501 ORTHO05D001329 6.4e-11 72.0 322 29.2
PGR031G3944 Punica granatum HOM05D001501 ORTHO05D001329 6.4e-11 72.0 330 28.5
FAN16G1511 Fragaria x ananassa HOM05D001501 ORTHO05D001329 8.4e-11 71.6 297 29.6
vmacro09518 Vaccinium macrocarpon HOM05D000070 ORTHO05D006683 1.1e-10 71.2 188 34.0
Lsat_1_v5_gn_9_98300 Lactuca sativa HOM05D016023 ORTHO05D010242 1.9e-10 70.5 179 36.3
Potri.001G372800 Populus trichocarpa HOM05D008621 ORTHO05D010242 1.9e-10 70.5 326 27.0
CARHR090090 Cardamine hirsuta HOM05D008621 ORTHO05D010242 3.2e-10 69.7 234 31.2
FAN25G3082 Fragaria x ananassa HOM05D001501 ORTHO05D001329 3.2e-10 69.7 294 28.9
ECA240G0649 Erigeron canadensis HOM05D016023 ORTHO05D010242 5.4e-10 68.9 162 37.0
EL10Ac4g08261 Beta vulgaris HOM05D001501 ORTHO05D001329 7.1e-10 68.6 346 27.2
BcaB06g29537 Brassica carinata HOM05D008621 ORTHO05D010242 7.1e-10 68.6 220 31.4
C05p52100 Brassica napus HOM05D008621 ORTHO05D010242 7.1e-10 68.6 202 31.7
Lalb_Chr20g0109461 Lupinus albus HOM05D001501 ORTHO05D001329 9.3e-10 68.2 296 28.0
AL3G27470 Arabidopsis lyrata HOM05D008621 ORTHO05D010242 1.2e-09 67.8 235 31.5
DCAR_017119 Daucus carota HOM05D010484 ORTHO05D010242 1.2e-09 67.8 254 31.1
FAN11G0392 Fragaria x ananassa HOM05D001501 ORTHO05D001329 1.2e-09 67.8 294 28.6
BolC5t33895H Brassica oleracea HOM05D008621 ORTHO05D010242 1.6e-09 67.4 190 32.1
FvH4_3g19190 Fragaria vesca HOM05D001501 ORTHO05D001329 1.6e-09 67.4 294 28.6
Aa31LG8G2330 Aethionema arabicum HOM05D008621 ORTHO05D010242 2.7e-09 66.6 299 28.1
A01p38850 Brassica napus HOM05D008621 ORTHO05D010242 3.5e-09 66.2 328 28.7
Sabra16G0245400 Salix brachista HOM05D008621 ORTHO05D010242 3.5e-09 66.2 327 27.8
AT3G15115 Arabidopsis thaliana HOM05D008621 ORTHO05D010242 4.6e-09 65.9 212 31.1
Sp3g13320 Schrenkiella parvula HOM05D008621 ORTHO05D010242 4.6e-09 65.9 233 31.8
ClCG05G009220 Citrullus lanatus HOM05D001501 ORTHO05D001329 6.0e-09 65.5 209 31.6
BcaC09g48475 Brassica carinata HOM05D008621 ORTHO05D010242 7.9e-09 65.1 206 32.5
BolC1t04897H Brassica oleracea HOM05D008621 ORTHO05D010242 7.9e-09 65.1 206 32.5
Carub.0003s1476 Capsella rubella HOM05D008621 ORTHO05D010242 7.9e-09 65.1 182 34.1
BcaB04g20947 Brassica carinata HOM05D008621 ORTHO05D010242 1.0e-08 64.7 204 32.4
A05p34320 Brassica napus HOM05D008621 ORTHO05D010242 1.3e-08 64.3 191 31.4
C01p49400 Brassica napus HOM05D008621 ORTHO05D010242 1.3e-08 64.3 235 31.1
Migut.M00772 Erythranthe guttata HOM05D016023 ORTHO05D010242 1.8e-08 63.9 137 33.6
Sc16g0007300 Simmondsia chinensis HOM05D001501 ORTHO05D001329 1.8e-08 63.9 270 29.6
Cfa020621 Carpinus fangiana HOM05D001501 ORTHO05D001329 2.3e-08 63.5 310 27.7
Manes.03G104500 Manihot esculenta HOM05D008621 ORTHO05D010242 2.3e-08 63.5 286 28.3
CsaV3_3G019560 Cucumis sativus L. HOM05D001501 ORTHO05D001329 5.1e-08 62.4 209 30.1
GSVIVG01014264001 Vitis vinifera HOM05D001501 ORTHO05D001329 5.1e-08 62.4 167 35.3
AUR62036146 Chenopodium quinoa HOM05D001501 ORTHO05D001329 6.7e-08 62.0 148 33.1
MD03G1235500 Malus domestica HOM05D001501 ORTHO05D001329 6.7e-08 62.0 314 27.4
VMungo1080G0146 Vigna mungo HOM05D001501 ORTHO05D001329 6.7e-08 62.0 326 25.8
A08p01770 Brassica napus HOM05D008621 ORTHO05D010242 8.7e-08 61.6 159 34.0
arahy.Tifrunner.gnm1.ann1.B8RZEA Arachis hypogaea HOM05D001501 ORTHO05D001329 1.1e-07 61.2 323 25.7
Glyma.12G227100 Glycine max HOM05D001501 ORTHO05D001329 1.1e-07 61.2 322 26.7
DCAR_020999 Daucus carota HOM05D008621 ORTHO05D010242 1.5e-07 60.8 284 26.4
PSO675G3629 Papaver somniferum HOM05D001501 ORTHO05D001329 1.9e-07 60.5 263 27.4
AUR62019490 Chenopodium quinoa HOM05D001501 ORTHO05D001329 2.5e-07 60.1 146 37.7
Medtr2g078620 Medicago truncatula HOM05D001501 ORTHO05D001329 2.5e-07 60.1 309 26.5
arahy.Tifrunner.gnm1.ann1.14Q3ET Arachis hypogaea HOM05D001501 ORTHO05D001329 3.3e-07 59.7 326 25.2
Phvul.005G069500 Phaseolus vulgaris HOM05D001501 ORTHO05D001329 3.3e-07 59.7 321 25.5
TWI38G1368 Tripterygium wilfordii HOM05D001501 ORTHO05D001329 3.3e-07 59.7 231 28.1
BcaC01g01366 Brassica carinata HOM05D008621 ORTHO05D010242 4.3e-07 59.3 159 34.0
BolC3t21434H Brassica oleracea HOM05D008621 ORTHO05D010242 4.3e-07 59.3 159 34.0
CiPaw.11G166600 Carya illinoinensis HOM05D001501 ORTHO05D001329 4.3e-07 59.3 330 26.4
Thhalv10021100m.g Eutrema salsugineum HOM05D008621 ORTHO05D010242 4.3e-07 59.3 203 30.0
MD11G1256500 Malus domestica HOM05D001501 ORTHO05D001329 5.6e-07 58.9 311 27.0
Manes.15G090300 Manihot esculenta HOM05D008621 ORTHO05D010242 1.6e-06 57.4 313 25.6
THA.LOC104810457 Tarenaya hassleriana HOM05D008621 ORTHO05D010242 1.6e-06 57.4 319 28.2
Psat5g241480 Pisum sativum HOM05D001501 ORTHO05D001329 2.1e-06 57.0 290 27.2
Glyma.13G273200 Glycine max HOM05D001501 ORTHO05D001329 4.8e-06 55.8 321 27.4
Sp1g39760 Schrenkiella parvula HOM05D008621 ORTHO05D010242 6.2e-06 55.5 210 28.1
C03p91210 Brassica napus HOM05D008621 ORTHO05D010242 8.1e-06 55.1 190 31.1
PSO541G6205 Papaver somniferum HOM05D001501 ORTHO05D001329 8.1e-06 55.1 261 26.1


User provided reference genes

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