Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 5.2e-159 564.3 279 100.0
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 2.6e-118 429.1 288 76.7
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 1.2e-115 420.2 289 74.7
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 5.3e-111 404.8 282 74.8
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 6.9e-111 404.4 286 72.0
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 3.8e-109 398.7 285 73.7
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 4.9e-109 398.3 288 72.2
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 2.4e-108 396.0 288 71.9
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 1.2e-107 393.7 287 71.8
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 5.1e-106 388.3 280 71.4
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 6.7e-106 387.9 286 71.3
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 8.7e-106 387.5 241 80.1
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 1.9e-105 386.3 270 72.6
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 1.9e-105 386.3 228 81.1
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 3.3e-105 385.6 232 81.5
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 3.3e-105 385.6 281 70.1
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 3.3e-105 385.6 288 68.1
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 4.3e-105 385.2 241 78.8
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 4.3e-105 385.2 270 73.3
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 5.6e-105 384.8 286 71.3
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 9.6e-105 384.0 263 74.1
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 1.3e-104 383.6 280 70.7
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.3e-104 383.6 254 76.0
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 1.6e-104 383.3 246 77.2
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 2.1e-104 382.9 278 71.2
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 3.6e-104 382.1 342 62.0
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 6.2e-104 381.3 275 70.5
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 6.2e-104 381.3 242 78.5
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 1.4e-103 380.2 301 68.1
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 2.4e-103 379.4 228 80.7
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 2.4e-103 379.4 261 73.6
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 2.4e-103 379.4 279 70.3
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 2.4e-103 379.4 237 78.1
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 3.1e-103 379.0 281 70.5
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 3.1e-103 379.0 247 76.1
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 4.0e-103 378.6 280 70.4
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 5.3e-103 378.3 295 68.1
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 6.9e-103 377.9 275 71.3
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 9.0e-103 377.5 283 68.9
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 9.0e-103 377.5 290 69.0
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 9.0e-103 377.5 241 77.6
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 1.2e-102 377.1 264 71.6
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.5e-102 376.7 233 77.7
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.5e-102 376.7 233 77.7
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 1.5e-102 376.7 252 76.2
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 2.0e-102 376.3 238 78.6
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 2.6e-102 375.9 270 72.2
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 4.5e-102 375.2 285 68.8
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 4.5e-102 375.2 238 78.2
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 5.8e-102 374.8 274 70.4
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 7.6e-102 374.4 228 78.5
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 9.9e-102 374.0 228 78.5
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 1.3e-101 373.6 225 78.7
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 1.7e-101 373.2 327 63.6
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 1.7e-101 373.2 276 70.7
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 1.7e-101 373.2 283 67.8
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 1.7e-101 373.2 294 65.6
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 2.2e-101 372.9 287 67.2
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 2.9e-101 372.5 255 72.9
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 3.8e-101 372.1 255 72.5
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 4.9e-101 371.7 234 77.4
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 4.9e-101 371.7 229 79.0
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 4.9e-101 371.7 229 78.2
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 4.9e-101 371.7 235 77.9
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 1.1e-100 370.5 228 78.1
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 1.4e-100 370.2 296 67.6
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 1.9e-100 369.8 258 71.7
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 2.4e-100 369.4 238 76.9
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 3.2e-100 369.0 235 75.7
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 4.2e-100 368.6 276 68.8
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 5.5e-100 368.2 231 77.1
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 5.5e-100 368.2 267 68.9
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 7.1e-100 367.9 279 67.0
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 2.1e-99 366.3 226 78.3
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 3.5e-99 365.5 248 75.4
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 4.6e-99 365.2 275 68.0
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 6.0e-99 364.8 226 78.8
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 1.3e-98 363.6 253 71.9
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 1.8e-98 363.2 213 80.8
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 3.0e-98 362.5 241 75.5
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 3.9e-98 362.1 257 71.6
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 1.1e-97 360.5 267 71.9
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 1.3e-96 357.1 270 68.1
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 4.8e-96 355.1 275 66.5
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 8.1e-96 354.4 309 61.8
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 8.1e-96 354.4 234 74.8
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 8.1e-96 354.4 242 71.9
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.4e-95 352.8 228 76.8
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.4e-95 352.8 228 76.8
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.4e-95 352.8 228 76.8
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 5.3e-95 351.7 298 61.1
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 6.9e-95 351.3 228 76.3
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 5.8e-94 348.2 234 72.6
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 5.8e-94 348.2 228 74.6
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 3.8e-93 345.5 238 72.7
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 6.0e-91 338.2 228 71.5
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 1.3e-90 337.0 215 75.8
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 6.9e-87 324.7 232 69.0
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 1.2e-78 297.4 226 65.9
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 1.6e-75 287.0 209 70.3
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 6.1e-75 285.0 205 63.9
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.8e-74 283.5 295 57.3
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 1.5e-73 280.4 202 64.9
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 2.6e-73 279.6 241 58.1
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.3e-72 277.3 219 68.0
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 2.0e-65 253.4 164 74.4
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 5.3e-63 245.4 163 74.8
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 9.1e-63 244.6 196 59.7
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 2.5e-36 156.8 239 43.5
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 8.9e-34 148.3 170 50.0
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.2e-33 147.9 95 80.0
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 7.5e-33 145.2 188 44.7
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 1.4e-31 141.0 111 64.9
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 1.7e-29 134.0 214 36.4
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 3.0e-29 133.3 158 41.8
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 1.2e-27 127.9 94 70.2
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 3.4e-25 119.8 130 46.9
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 2.4e-10 70.5 113 38.1
GSVIVG01036421001 Vitis vinifera HOM05D006690 ORTHO05D008541 2.9e-08 63.5 96 46.9
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 4.1e-07 59.7 146 30.1


User provided reference genes

Program Settings