Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G1413 Salvia bowleyana HOM05D005729 ORTHO05D007026 9.4e-91 337.0 194 100.0
SGA_v2.0_scaffold47G17637 Striga asiatica HOM05D005729 ORTHO05D007026 4.5e-61 238.4 194 75.8
Oeu003419.1 Olea europaea HOM05D005729 ORTHO05D007026 1.9e-59 233.0 201 75.1
Cpa.g.sc9.286 Carica papaya HOM05D005729 ORTHO05D007026 8.0e-58 227.6 198 72.2
Manes.04G092600 Manihot esculenta HOM05D005729 ORTHO05D007026 2.3e-57 226.1 194 68.6
Migut.K01484 Erythranthe guttata HOM05D005729 ORTHO05D007026 6.8e-57 224.6 186 75.8
Dinv33283 Davidia involucrata HOM05D005729 ORTHO05D007026 2.6e-56 222.6 199 71.4
Actinidia19554 Actinidia chinensis HOM05D005729 ORTHO05D007026 3.4e-56 222.2 204 72.1
Duzib187G1006 Durio zibethinus HOM05D005729 ORTHO05D007026 1.7e-55 219.9 195 70.3
CANSAT64G2014 Cannabis sativa HOM05D005729 ORTHO05D007026 3.7e-55 218.8 195 70.8
THA.LOC104815860 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 3.7e-55 218.8 195 69.7
unitig_92.g28207 Utricularia gibba HOM05D005729 ORTHO05D007026 1.4e-54 216.9 196 70.9
Lj1g0015500 Lotus japonicus HOM05D005729 ORTHO05D007026 2.7e-53 212.6 191 71.7
MELO3C005111.2 Cucumis melo HOM05D005729 ORTHO05D007026 5.9e-53 211.5 193 67.4
Phvul.001G085400 Phaseolus vulgaris HOM05D005729 ORTHO05D007026 5.9e-53 211.5 191 69.6
TPR.G10334 Trifolium pratense HOM05D005729 ORTHO05D007026 7.7e-53 211.1 190 70.0
ClCG01G007820 Citrullus lanatus HOM05D005729 ORTHO05D007026 1.3e-52 210.3 193 67.9
CsaV3_5G024890 Cucumis sativus L. HOM05D005729 ORTHO05D007026 1.3e-52 210.3 193 66.8
Prupe.2G125900 Prunus persica HOM05D005729 ORTHO05D007026 1.3e-52 210.3 193 68.9
Solyc02g094490.4 Solanum lycopersicum HOM05D005729 ORTHO05D007026 5.0e-52 208.4 190 67.9
Medtr7g083930 Medicago truncatula HOM05D005729 ORTHO05D007026 2.5e-51 206.1 195 68.7
THA.LOC104826200 Tarenaya hassleriana HOM05D005729 ORTHO05D007026 4.3e-51 205.3 189 71.4
Aqoxy5G03273 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 7.3e-51 204.5 191 67.5
Sed0006238 Sechium edule HOM05D005729 ORTHO05D007026 7.3e-51 204.5 191 67.0
PGR142G3540 Punica granatum HOM05D005729 ORTHO05D007026 9.5e-51 204.1 196 63.3
Thecc.04G047000 Theobroma cacao HOM05D005729 ORTHO05D007026 1.2e-50 203.8 198 66.7
Glyma.16G049200 Glycine max HOM05D005729 ORTHO05D007026 1.6e-50 203.4 195 68.2
MD00G1041400 Malus domestica HOM05D005729 ORTHO05D007026 1.6e-50 203.4 200 65.5
Sed0018343 Sechium edule HOM05D005729 ORTHO05D007026 1.6e-50 203.4 195 65.6
CiPaw.03G002600 Carya illinoinensis HOM05D005729 ORTHO05D007026 2.1e-50 203.0 191 66.5
RcHm_v2.0_Chr5g0049531 Rosa chinensis HOM05D005729 ORTHO05D007026 2.1e-50 203.0 194 63.9
Aqoxy5G03167 Aquilegia oxysepala HOM05D005729 ORTHO05D007026 3.6e-50 202.2 190 67.4
Potri.014G145600 Populus trichocarpa HOM05D005729 ORTHO05D007026 3.6e-50 202.2 194 64.4
Glyma.19G102200 Glycine max HOM05D005729 ORTHO05D007026 4.7e-50 201.8 194 68.0
CSS0020873 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.8e-49 199.9 195 66.2
Thhalv10017252m.g Eutrema salsugineum HOM05D005729 ORTHO05D007026 3.0e-49 199.1 198 66.2
Lsat_1_v5_gn_2_94961 Lactuca sativa HOM05D005729 ORTHO05D007026 4.0e-49 198.7 185 68.6
DCAR_014472 Daucus carota HOM05D005729 ORTHO05D007026 5.2e-49 198.4 196 66.3
MD05G1139400 Malus domestica HOM05D005729 ORTHO05D007026 6.8e-49 198.0 194 64.9
FAN17G0918 Fragaria x ananassa HOM05D005729 ORTHO05D007026 2.0e-48 196.4 195 62.6
FAN22G1114 Fragaria x ananassa HOM05D005729 ORTHO05D007026 2.0e-48 196.4 195 62.6
Ca_08134_v3 Cicer arietinum L. HOM05D005729 ORTHO05D007026 2.6e-48 196.1 189 65.1
arahy.Tifrunner.gnm1.ann1.33W0XH Arachis hypogaea HOM05D005729 ORTHO05D007026 5.7e-48 194.9 198 63.6
QL11p027744 Quercus lobata HOM05D005729 ORTHO05D007026 5.7e-48 194.9 192 63.5
FAN21G1155 Fragaria x ananassa HOM05D005729 ORTHO05D007026 1.7e-47 193.4 195 64.6
Psat3g093680 Pisum sativum HOM05D005729 ORTHO05D007026 2.2e-47 193.0 194 65.5
FvH4_4g34010 Fragaria vesca HOM05D005729 ORTHO05D007026 2.9e-47 192.6 195 61.5
CAN.G473.157 Capsicum annuum HOM05D005729 ORTHO05D007026 4.9e-47 191.8 185 67.0
Dinv25620 Davidia involucrata HOM05D000884 ORTHO05D002127 4.9e-47 191.8 189 68.3
Lalb_Chr22g0359961 Lupinus albus HOM05D005729 ORTHO05D007026 4.9e-47 191.8 196 64.8
Duzib264G0852 Durio zibethinus HOM05D005729 ORTHO05D007026 6.4e-47 191.4 198 62.6
FAN12G1178 Fragaria x ananassa HOM05D005729 ORTHO05D007026 6.4e-47 191.4 195 61.5
Potri.002G237000 Populus trichocarpa HOM05D005729 ORTHO05D007026 1.1e-46 190.7 199 65.3
Peaxi162Scf00420g00083 Petunia axillaris HOM05D005729 ORTHO05D007026 1.8e-46 189.9 193 64.8
PGSC0003DMG400035897 Solanum tuberosum HOM05D005729 ORTHO05D007026 1.8e-46 189.9 190 64.7
Nn4g22156 Nelumbo nucifera HOM05D005729 ORTHO05D007026 5.4e-46 188.3 184 66.3
FAN25G1272 Fragaria x ananassa HOM05D005729 ORTHO05D007026 7.0e-46 188.0 195 64.1
HanXRQChr14g0451391 Helianthus annuus HOM05D005729 ORTHO05D007026 7.0e-46 188.0 194 62.9
TAR371G0439 Trochodendron aralioides HOM05D005729 ORTHO05D007026 9.2e-46 187.6 192 65.1
Eucgr.G01937 Eucalyptus grandis HOM05D005729 ORTHO05D007026 1.6e-45 186.8 196 63.3
MBI07_g07331_MAGBIO Magnolia biondii HOM05D005729 ORTHO05D007026 5.9e-45 184.9 195 63.6
Ah.02g128910 Amaranthus hybridus HOM05D005729 ORTHO05D007026 3.0e-44 182.6 190 63.7
Lju41C60T1 Lonicera japonica HOM05D005729 ORTHO05D007026 3.0e-44 182.6 204 61.8
CARHR125040 Cardamine hirsuta HOM05D005729 ORTHO05D007026 3.9e-44 182.2 192 64.1
Gorai.001G275800 Gossypium raimondii HOM05D005729 ORTHO05D007026 3.9e-44 182.2 191 61.3
Sopen02g039170 Solanum pennellii HOM05D005729 ORTHO05D007026 5.0e-44 181.8 190 63.2
Ciclev10016760m.g Citrus clementina HOM05D005729 ORTHO05D007026 6.6e-44 181.4 196 60.2
EL10As7g23751 Beta vulgaris HOM05D005729 ORTHO05D007026 8.6e-44 181.0 190 62.6
Aa31LG5G5560 Aethionema arabicum HOM05D005729 ORTHO05D007026 1.1e-43 180.6 198 63.6
Gohir.D07G239700 Gossypium hirsutum HOM05D005729 ORTHO05D007026 1.5e-43 180.3 191 61.3
Sp4g13900 Schrenkiella parvula HOM05D005729 ORTHO05D007026 1.9e-43 179.9 199 62.8
TWI34G0826 Tripterygium wilfordii HOM05D005729 ORTHO05D007026 5.6e-43 178.3 198 61.6
EL10Ac6g13393 Beta vulgaris HOM05D005729 ORTHO05D007026 2.1e-42 176.4 190 61.6
BcaC02g07982 Brassica carinata HOM05D005729 ORTHO05D007026 2.1e-42 176.4 197 61.4
C04p61110 Brassica napus HOM05D005729 ORTHO05D007026 2.1e-42 176.4 197 61.4
BolC4t27596H Brassica oleracea HOM05D005729 ORTHO05D007026 2.1e-42 176.4 197 61.4
ECA238G1999 Erigeron canadensis HOM05D005729 ORTHO05D007026 3.6e-42 175.6 194 60.8
Sc07g0003710 Simmondsia chinensis HOM05D005729 ORTHO05D007026 2.3e-41 172.9 190 60.0
ATR0559G324 Amborella trichopoda HOM05D005729 ORTHO05D007026 8.9e-41 171.0 206 58.3
Zm00001eb183750 Zea mays HOM05D005729 ORTHO05D007026 8.9e-41 171.0 187 58.3
Nitab4.5_0002172g0090 Nicotiana tabacum HOM05D005729 ORTHO05D007026 1.5e-40 170.2 193 59.6
TAR628G1373 Trochodendron aralioides HOM05D005729 ORTHO05D007026 1.5e-40 170.2 192 60.9
Gohir.A07G232500 Gossypium hirsutum HOM05D005729 ORTHO05D007026 3.4e-40 169.1 191 58.1
TAR629G2671 Trochodendron aralioides HOM05D005729 ORTHO05D007026 3.4e-40 169.1 192 60.4
A04p24280 Brassica napus HOM05D005729 ORTHO05D007026 7.5e-40 167.9 195 60.5
BraA04t17947Z Brassica rapa HOM05D005729 ORTHO05D007026 7.5e-40 167.9 195 60.5
AL4G26660 Arabidopsis lyrata HOM05D005729 ORTHO05D007026 1.4e-38 163.7 197 58.4
Carub.0004s1273 Capsella rubella HOM05D005729 ORTHO05D007026 1.4e-38 163.7 197 57.9
HPP92_011631 Vanilla planifolia HOM05D005729 ORTHO05D007026 4.1e-38 162.2 190 58.4
BcaB01g04046 Brassica carinata HOM05D005729 ORTHO05D007026 7.0e-38 161.4 199 58.3
BraA03t11026Z Brassica rapa HOM05D005729 ORTHO05D007026 2.7e-37 159.5 197 59.4
Atru.chr6.2652 Acer truncatum HOM05D005729 ORTHO05D007026 3.5e-37 159.1 195 57.4
AT2G31410 Arabidopsis thaliana HOM05D005729 ORTHO05D007026 4.6e-37 158.7 198 57.6
A03p17590 Brassica napus HOM05D005729 ORTHO05D007026 1.0e-36 157.5 191 60.2
Rhsim08G0039300 Rhododendron simsii HOM05D005729 ORTHO05D007026 1.0e-36 157.5 142 71.1
CSS0008758 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 1.3e-36 157.1 135 72.6
RcHm_v2.0_Chr6g0252241 Rosa chinensis HOM05D005729 ORTHO05D007026 1.7e-36 156.8 166 58.4
Cfa007167 Carpinus fangiana HOM05D005729 ORTHO05D007026 2.3e-36 156.4 196 57.1
Os02g0595400 Oryza sativa ssp. japonica HOM05D005729 ORTHO05D007026 5.0e-36 155.2 187 57.8
Zm00001eb246070 Zea mays HOM05D005729 ORTHO05D007026 1.1e-35 154.1 189 51.9
C03p20700 Brassica napus HOM05D005729 ORTHO05D007026 1.5e-35 153.7 190 59.5
BolC3t14453H Brassica oleracea HOM05D005729 ORTHO05D007026 1.5e-35 153.7 190 59.5
Cfa016824 Carpinus fangiana HOM05D005729 ORTHO05D007026 1.5e-35 153.7 196 57.1
Haze_19869 Corylus avellana HOM05D005729 ORTHO05D007026 1.5e-35 153.7 196 57.1
CSS0019060 Camellia sinensis var. sinensis HOM05D005729 ORTHO05D007026 7.3e-35 151.4 135 71.1
RcHm_v2.0_Chr2g0115461 Rosa chinensis HOM05D005729 ORTHO05D007026 2.1e-34 149.8 166 56.6
Haze_14943 Corylus avellana HOM05D005729 ORTHO05D007026 3.6e-34 149.1 196 56.1
RcHm_v2.0_Chr7g0240621 Rosa chinensis HOM05D005729 ORTHO05D007026 8.1e-34 147.9 166 56.6
Pp3c11_25830 Physcomitrium patens HOM05D005729 ORTHO05D007026 8.9e-33 144.4 182 53.3
PSO478G2072 Papaver somniferum HOM05D005729 ORTHO05D007026 1.5e-32 143.7 190 47.4
AUR62036639 Chenopodium quinoa HOM05D005729 ORTHO05D007026 9.8e-32 141.0 199 54.8
Nitab4.5_0000519g0260 Nicotiana tabacum HOM05D005729 ORTHO05D007026 2.9e-31 139.4 153 63.4
RcHm_v2.0_Chr5g0057561 Rosa chinensis HOM05D005729 ORTHO05D007026 2.1e-29 133.3 157 59.9
Sabra02G0180500 Salix brachista HOM05D005729 ORTHO05D007026 2.3e-28 129.8 184 48.4
PSO017G0758 Papaver somniferum HOM05D005729 ORTHO05D007026 1.5e-27 127.1 190 49.5
RcHm_v2.0_Chr6g0272931 Rosa chinensis HOM05D005729 ORTHO05D007026 7.3e-27 124.8 137 58.4
Cc07_g01230 Coffea canephora HOM05D005729 ORTHO05D007026 1.6e-26 123.6 203 53.2
COL.COLO4_13365 Corchorus olitorius HOM05D005729 ORTHO05D007026 5.2e-25 118.6 105 61.0
RcHm_v2.0_Chr2g0117931 Rosa chinensis HOM05D005729 ORTHO05D007026 5.2e-25 118.6 153 58.2
AUR62034632 Chenopodium quinoa HOM05D000604 ORTHO05D004512 3.4e-24 115.9 116 55.2
RcHm_v2.0_Chr5g0026441 Rosa chinensis HOM05D005729 ORTHO05D007026 3.4e-24 115.9 135 54.8
CDE06G2057 Ceratophyllum demersum HOM05D005729 ORTHO05D007026 2.9e-23 112.8 121 56.2
RcHm_v2.0_Chr1g0315821 Rosa chinensis HOM05D005729 ORTHO05D007026 4.9e-23 112.1 153 56.2
Mapoly0127s0012 Marchantia polymorpha HOM05D005729 ORTHO05D007026 2.3e-20 103.2 185 45.4
Haze_19868 Corylus avellana HOM05D005729 ORTHO05D007026 3.3e-19 99.4 98 57.1
RcHm_v2.0_Chr6g0295141 Rosa chinensis HOM05D005729 ORTHO05D007026 1.6e-18 97.1 119 59.7
Psat4g074560 Pisum sativum HOM05D005729 ORTHO05D007026 1.5e-16 90.5 125 46.4
Solyc03g083260.1 Solanum lycopersicum HOM05D005729 ORTHO05D007026 4.4e-16 89.0 87 58.6
Sc14g0008230 Simmondsia chinensis HOM05D005729 ORTHO05D007026 9.9e-16 87.8 133 44.4
Hma1.2p1_0033F.1_g021130 Hydrangea macrophylla HOM05D005729 ORTHO05D007026 3.2e-14 82.8 104 60.6
Psat4g074600 Pisum sativum HOM05D005729 ORTHO05D007026 3.0e-12 76.3 127 45.7
Atru.chr5.655 Acer truncatum HOM05D000598 ORTHO05D000480 1.3e-10 70.9 135 48.9
CBR_g4589 Chara braunii HOM05D005729 ORTHO05D007026 1.6e-10 70.5 183 39.9
EL10Ac1g01380 Beta vulgaris HOM05D005729 ORTHO05D007026 4.8e-10 68.9 66 59.1
Lalb_Chr14g0364061 Lupinus albus HOM05D005729 ORTHO05D007026 1.1e-09 67.8 61 78.7
Atru.chr6.2684 Acer truncatum HOM05D005729 ORTHO05D007026 1.3e-07 60.8 73 52.1
FvH4_3g27021 Fragaria vesca HOM05D005729 ORTHO05D007026 8.4e-07 58.2 72 48.6


User provided reference genes

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