Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 2.5e-195 685.3 351 100.0
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 6.7e-164 580.9 342 83.9
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 9.1e-161 570.5 342 83.0
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 2.7e-152 542.3 338 79.3
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 7.7e-152 540.8 338 79.0
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 1.3e-151 540.0 340 79.1
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 1.3e-151 540.0 342 78.9
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 3.8e-151 538.5 342 78.4
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 5.0e-151 538.1 342 77.8
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 8.5e-151 537.3 340 79.4
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 8.5e-151 537.3 340 78.8
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 7.2e-150 534.3 338 77.8
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 2.1e-149 532.7 340 78.5
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 1.4e-148 530.0 342 76.6
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 1.4e-148 530.0 339 78.2
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 3.0e-148 528.9 341 78.3
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 5.2e-148 528.1 338 78.4
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 1.5e-147 526.6 340 75.6
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 2.6e-147 525.8 345 76.2
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 4.4e-147 525.0 338 76.0
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 9.8e-147 523.9 338 78.1
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 2.2e-146 522.7 337 77.2
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 3.7e-146 521.9 338 75.1
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 6.3e-146 521.2 341 74.8
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 8.3e-146 520.8 338 75.1
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 8.3e-146 520.8 338 76.3
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.1e-145 520.4 338 77.8
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 3.1e-145 518.8 335 76.1
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 3.1e-145 518.8 354 74.3
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 3.1e-145 518.8 338 77.8
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 4.1e-145 518.5 343 74.9
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 4.1e-145 518.5 339 76.7
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 5.4e-145 518.1 338 74.9
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 7.0e-145 517.7 339 75.5
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 1.2e-144 516.9 340 76.5
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 2.0e-144 516.2 343 74.6
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 2.7e-144 515.8 342 73.4
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 5.9e-144 514.6 340 74.1
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 5.9e-144 514.6 343 74.9
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 7.7e-144 514.2 340 73.8
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 1.0e-143 513.8 338 74.3
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 1.0e-143 513.8 338 75.1
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.0e-143 513.8 339 75.2
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 1.7e-143 513.1 337 75.1
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 2.3e-143 512.7 338 75.7
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 6.6e-143 511.1 338 73.1
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 1.5e-142 510.0 342 75.1
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.5e-142 510.0 338 74.6
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 9.5e-142 507.3 312 77.2
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 9.5e-142 507.3 429 62.5
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 2.1e-141 506.1 342 72.2
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 3.6e-141 505.4 338 72.2
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 1.4e-140 503.4 340 72.1
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.8e-140 503.1 338 72.2
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 3.0e-140 502.3 343 71.7
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 8.9e-140 500.7 348 73.6
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 1.2e-139 500.4 340 72.6
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 1.5e-139 500.0 340 72.6
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 2.6e-139 499.2 348 73.0
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 9.8e-139 497.3 340 72.1
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 9.8e-139 497.3 340 72.1
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 9.8e-139 497.3 338 75.7
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 9.8e-139 497.3 340 71.8
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.3e-138 496.9 340 72.1
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.7e-138 496.5 335 73.1
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 2.2e-138 496.1 340 71.5
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 1.1e-137 493.8 340 71.8
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 1.1e-137 493.8 338 72.2
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 1.4e-137 493.4 299 77.6
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.4e-137 493.4 341 72.4
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 3.2e-137 492.3 338 71.9
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 9.2e-137 490.7 340 71.5
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 9.2e-137 490.7 339 71.1
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 2.0e-136 489.6 342 69.9
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 3.5e-136 488.8 369 69.9
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 1.0e-135 487.3 339 69.3
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 1.3e-135 486.9 338 71.0
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 4.7e-133 478.4 338 71.6
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 4.7e-133 478.4 342 68.4
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 4.9e-130 468.4 339 70.2
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 1.9e-129 466.5 335 69.3
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 1.5e-126 456.8 341 67.4
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.1e-124 450.7 262 83.6
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 5.4e-121 438.3 316 66.1
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.5e-118 430.3 338 66.6
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 1.9e-118 429.9 333 62.8
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 1.7e-114 416.8 339 64.9
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 1.1e-113 414.1 336 60.1
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 9.2e-113 411.0 247 80.2
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 2.1e-112 409.8 367 63.5
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 2.7e-112 409.5 340 60.0
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.8e-109 399.4 373 57.6
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 3.6e-109 399.1 338 63.3
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 1.5e-107 393.7 231 80.5
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 2.9e-106 389.4 527 46.5
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 4.9e-106 388.7 341 62.5
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 1.8e-100 370.2 222 79.7
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 4.6e-96 355.5 251 73.3
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 7.1e-81 305.1 336 51.8
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 1.2e-80 304.3 182 79.7
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 2.3e-71 273.5 155 81.3
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 7.4e-70 268.5 177 73.4
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 6.3e-69 265.4 220 57.3
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 1.7e-66 257.3 327 44.3
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 1.4e-63 247.7 405 37.3
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 1.5e-54 217.6 126 79.4
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 1.7e-50 204.1 323 39.0
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 2.9e-50 203.4 130 76.2
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 1.5e-46 191.0 380 34.5
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 3.1e-44 183.3 126 72.2
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 3.4e-38 163.3 97 78.4
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 1.1e-33 148.3 93 69.9
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 2.5e-33 147.1 84 84.5
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 1.0e-23 115.2 76 71.1
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 5.4e-20 102.8 53 88.7
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.9e-17 94.4 64 62.5
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.0e-14 84.3 56 80.4
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 3.0e-10 70.5 44 70.5
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 5.0e-10 69.7 141 35.5
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 3.4e-06 57.0 30 86.7


User provided reference genes

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