Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G0985 Salvia bowleyana HOM05D006939 ORTHO05D008616 7.5e-203 710.3 357 100.0
Migut.M00074 Erythranthe guttata HOM05D006939 ORTHO05D008616 4.8e-157 558.1 323 85.1
SGA_v2.0_scaffold73G24476 Striga asiatica HOM05D006939 ORTHO05D008616 3.3e-142 508.8 333 76.3
CSS0002269 Camellia sinensis var. sinensis HOM05D006939 ORTHO05D008616 9.6e-142 507.3 327 77.4
Dinv25196 Davidia involucrata HOM05D006939 ORTHO05D008616 2.8e-141 505.8 342 74.6
PGSC0003DMG400001838 Solanum tuberosum HOM05D006939 ORTHO05D008616 9.3e-137 490.7 323 73.4
Lj8C13T0 Lonicera japonica HOM05D006939 ORTHO05D008616 1.3e-135 486.9 331 74.9
MSTRG.14901 Avicennia marina HOM05D006939 ORTHO05D008616 3.0e-135 485.7 321 76.0
Gohir.D05G067200 Gossypium hirsutum HOM05D006939 ORTHO05D008616 1.4e-132 476.9 317 74.8
Gorai.009G068000 Gossypium raimondii HOM05D006939 ORTHO05D008616 2.4e-132 476.1 329 72.0
Cc02_g39540 Coffea canephora HOM05D006939 ORTHO05D008616 3.1e-132 475.7 323 73.4
Thecc.09G006900 Theobroma cacao HOM05D006939 ORTHO05D008616 4.1e-132 475.3 317 75.4
Sopen08g026100 Solanum pennellii HOM05D006939 ORTHO05D008616 6.9e-132 474.6 323 71.2
GSVIVG01035522001 Vitis vinifera HOM05D006939 ORTHO05D008616 9.0e-132 474.2 338 71.0
Solyc08g077520.3 Solanum lycopersicum HOM05D006939 ORTHO05D008616 1.2e-131 473.8 323 71.2
TAR369G0747 Trochodendron aralioides HOM05D006939 ORTHO05D008616 1.5e-131 473.4 336 70.8
Nn8g40552 Nelumbo nucifera HOM05D006939 ORTHO05D008616 2.6e-131 472.6 340 69.1
Gohir.A05G064600 Gossypium hirsutum HOM05D006939 ORTHO05D008616 4.5e-131 471.9 323 73.7
Duzib168G0459 Durio zibethinus HOM05D006939 ORTHO05D008616 1.4e-129 466.8 318 73.6
QL12p025112 Quercus lobata HOM05D006939 ORTHO05D008616 1.4e-129 466.8 326 72.7
Actinidia06924 Actinidia chinensis HOM05D006939 ORTHO05D008616 1.2e-128 463.8 326 72.7
CAN.G1445.9 Capsicum annuum HOM05D006939 ORTHO05D008616 1.2e-128 463.8 314 72.3
Sc09g0010200 Simmondsia chinensis HOM05D006939 ORTHO05D008616 2.7e-128 462.6 321 72.6
Ciclev10008814m.g Citrus clementina HOM05D006939 ORTHO05D008616 3.6e-128 462.2 317 73.5
Lj1g0013260 Lotus japonicus HOM05D006939 ORTHO05D008616 6.1e-128 461.5 336 69.6
Peaxi162Scf00084g00007 Petunia axillaris HOM05D006939 ORTHO05D008616 2.3e-127 459.5 293 77.1
Manes.03G003600 Manihot esculenta HOM05D006939 ORTHO05D008616 3.9e-127 458.8 323 72.1
CiPaw.07G213000 Carya illinoinensis HOM05D006939 ORTHO05D008616 5.1e-127 458.4 313 74.8
VMungo1309G0618 Vigna mungo HOM05D006939 ORTHO05D008616 6.7e-127 458.0 348 67.0
MBI16_g38081_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 1.1e-126 457.2 329 69.6
Ca_15668_v3 Cicer arietinum L. HOM05D006939 ORTHO05D008616 3.3e-126 455.7 350 66.9
THA.LOC104814976 Tarenaya hassleriana HOM05D006939 ORTHO05D008616 4.3e-126 455.3 321 70.1
MELO3C011191.2 Cucumis melo HOM05D006939 ORTHO05D008616 1.3e-125 453.8 335 70.1
CsaV3_2G031410 Cucumis sativus L. HOM05D006939 ORTHO05D008616 1.3e-125 453.8 335 69.9
Glyma.04G075200 Glycine max HOM05D006939 ORTHO05D008616 2.2e-125 453.0 318 71.7
TWI63G0558 Tripterygium wilfordii HOM05D006939 ORTHO05D008616 2.8e-125 452.6 320 71.2
HanXRQChr12g0379171 Helianthus annuus HOM05D006939 ORTHO05D008616 4.8e-125 451.8 316 71.5
Glyma.06G076400 Glycine max HOM05D006939 ORTHO05D008616 4.1e-124 448.7 348 66.1
Atru.chr7.2637 Acer truncatum HOM05D006939 ORTHO05D008616 9.1e-124 447.6 323 69.7
arahy.Tifrunner.gnm1.ann1.WZEV1S Arachis hypogaea HOM05D006939 ORTHO05D008616 3.4e-123 445.7 313 72.5
arahy.Tifrunner.gnm1.ann1.8I4SMW Arachis hypogaea HOM05D006939 ORTHO05D008616 5.9e-123 444.9 313 72.2
Potri.018G005900 Populus trichocarpa HOM05D006939 ORTHO05D008616 7.7e-123 444.5 327 69.1
CANSAT25G1759 Cannabis sativa HOM05D006939 ORTHO05D008616 1.3e-122 443.7 354 65.5
Aqoxy7G02987 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 2.2e-122 443.0 323 69.3
Prupe.1G460400 Prunus persica HOM05D006939 ORTHO05D008616 2.2e-122 443.0 332 65.4
unitig_61.g26486 Utricularia gibba HOM05D006939 ORTHO05D008616 2.2e-122 443.0 335 67.5
PSO170G5391 Papaver somniferum HOM05D006939 ORTHO05D008616 3.8e-122 442.2 340 66.5
AUR62009066 Chenopodium quinoa HOM05D006939 ORTHO05D008616 8.5e-122 441.0 323 69.7
PSO063G0559 Papaver somniferum HOM05D006939 ORTHO05D008616 8.5e-122 441.0 337 66.8
Sed0018205 Sechium edule HOM05D006939 ORTHO05D008616 3.2e-121 439.1 323 69.0
ECA240G2907 Erigeron canadensis HOM05D006939 ORTHO05D008616 7.2e-121 438.0 327 68.5
Medtr3g108805 Medicago truncatula HOM05D006939 ORTHO05D008616 7.2e-121 438.0 319 71.2
Sabra18G0011600 Salix brachista HOM05D006939 ORTHO05D008616 7.2e-121 438.0 333 67.0
Sabra18G0014100 Salix brachista HOM05D006939 ORTHO05D008616 7.2e-121 438.0 333 67.0
TPR.G12361 Trifolium pratense HOM05D006939 ORTHO05D008616 2.7e-120 436.0 315 70.8
Lalb_Chr08g0243571 Lupinus albus HOM05D006939 ORTHO05D008616 6.1e-120 434.9 309 73.1
Oeu040447.1 Olea europaea HOM05D006939 ORTHO05D008616 3.9e-119 432.2 279 75.3
Eucgr.C04007 Eucalyptus grandis HOM05D006939 ORTHO05D008616 5.1e-119 431.8 327 68.2
Hund19405 Selenicereus undatus HOM05D006939 ORTHO05D008616 2.6e-118 429.5 352 63.9
HPP92_017403 Vanilla planifolia HOM05D006939 ORTHO05D008616 2.6e-118 429.5 320 67.8
AUR62020602 Chenopodium quinoa HOM05D006939 ORTHO05D008616 1.3e-117 427.2 306 71.2
vmacro04127 Vaccinium macrocarpon HOM05D006939 ORTHO05D008616 2.2e-117 426.4 266 78.2
MD15G1108100 Malus domestica HOM05D006939 ORTHO05D008616 1.8e-116 423.3 314 66.6
Rhsim13G0217600 Rhododendron simsii HOM05D006939 ORTHO05D008616 2.4e-116 422.9 415 55.9
SGA_v2.0_scaffold49G18392 Striga asiatica HOM05D002257 ORTHO05D008616 3.1e-116 422.5 338 64.2
RcHm_v2.0_Chr6g0304951 Rosa chinensis HOM05D006939 ORTHO05D008616 1.2e-115 420.6 315 66.0
Sp6g32750 Schrenkiella parvula HOM05D006939 ORTHO05D008616 2.0e-115 419.9 317 68.1
PGR044G1028 Punica granatum HOM05D006939 ORTHO05D008616 1.3e-114 417.2 320 67.5
C03p05420 Brassica napus HOM05D006939 ORTHO05D008616 2.2e-114 416.4 317 65.9
CDE02G0224 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 3.8e-114 415.6 317 65.6
Lj8C69T1 Lonicera japonica HOM05D006939 ORTHO05D008616 5.0e-114 415.2 331 67.1
Nitab4.5_0006135g0050 Nicotiana tabacum HOM05D006939 ORTHO05D008616 5.0e-114 415.2 282 73.0
ClCG08G012690 Citrullus lanatus HOM05D006939 ORTHO05D008616 8.5e-114 414.5 335 66.0
A03p04710 Brassica napus HOM05D006939 ORTHO05D008616 1.1e-113 414.1 317 65.6
BcaB01g06272 Brassica carinata HOM05D006939 ORTHO05D008616 1.4e-113 413.7 317 65.6
BcaB01g05506 Brassica carinata HOM05D006939 ORTHO05D008616 1.9e-113 413.3 317 65.6
BraA03t09811Z Brassica rapa HOM05D006939 ORTHO05D008616 5.5e-113 411.8 317 65.3
DCAR_015445 Daucus carota HOM05D006939 ORTHO05D008616 7.2e-113 411.4 315 66.3
Carub.0006s0918 Capsella rubella HOM05D006939 ORTHO05D008616 1.6e-112 410.2 317 65.3
Aa31LG3G16420 Aethionema arabicum HOM05D006939 ORTHO05D008616 6.7e-111 404.8 320 64.4
AL6G21250 Arabidopsis lyrata HOM05D006939 ORTHO05D008616 8.8e-111 404.4 317 63.1
CARHR202610 Cardamine hirsuta HOM05D006939 ORTHO05D008616 1.5e-110 403.7 306 66.7
Psat5g025040 Pisum sativum HOM05D006939 ORTHO05D008616 3.3e-110 402.5 314 67.2
FAN20G0593 Fragaria x ananassa HOM05D006939 ORTHO05D008616 4.8e-109 398.7 315 64.1
FAN27G1343 Fragaria x ananassa HOM05D006939 ORTHO05D008616 2.4e-108 396.4 315 63.8
DCAR_026761 Daucus carota HOM05D006939 ORTHO05D008616 3.1e-108 396.0 315 63.8
BolC3t13053H Brassica oleracea HOM05D006939 ORTHO05D008616 5.3e-108 395.2 300 66.7
CiPaw.08G019500 Carya illinoinensis HOM05D006939 ORTHO05D008616 7.0e-108 394.8 325 65.8
FvH4_2g36790 Fragaria vesca HOM05D006939 ORTHO05D008616 7.0e-108 394.8 306 64.7
ATR0580G399 Amborella trichopoda HOM05D006939 ORTHO05D008616 7.7e-107 391.3 327 60.2
Cfa013266 Carpinus fangiana HOM05D006939 ORTHO05D008616 3.8e-106 389.0 232 82.3
Zm00001eb048210 Zea mays HOM05D006939 ORTHO05D008616 5.5e-105 385.2 335 58.5
EL10Ac2g03752 Beta vulgaris HOM05D006939 ORTHO05D008616 7.2e-105 384.8 323 62.8
Nitab4.5_0001255g0030 Nicotiana tabacum HOM05D006939 ORTHO05D008616 7.2e-105 384.8 290 67.2
Thhalv10014111m.g Eutrema salsugineum HOM05D006939 ORTHO05D008616 8.8e-103 377.9 332 61.4
Haze_21731 Corylus avellana HOM05D006939 ORTHO05D008616 6.5e-98 361.7 243 75.7
FAN15G1628 Fragaria x ananassa HOM05D006939 ORTHO05D008616 4.2e-97 359.0 305 60.7
EL10Ac5g10928 Beta vulgaris HOM05D006939 ORTHO05D008616 6.1e-96 355.1 265 67.5
AT5G10710 Arabidopsis thaliana HOM05D006939 ORTHO05D008616 2.0e-94 350.1 317 58.0
Lsat_1_v5_gn_5_46220 Lactuca sativa HOM05D006939 ORTHO05D008616 7.7e-91 338.2 318 59.1
Phvul.009G101000 Phaseolus vulgaris HOM05D006939 ORTHO05D008616 1.3e-82 310.8 196 76.0
SHI21120 Sapria himalayana HOM05D006939 ORTHO05D008616 6.4e-53 212.2 240 50.8
Aqoxy3G02235 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 3.8e-45 186.4 142 63.4
Pp3c6_9310 Physcomitrium patens HOM05D006939 ORTHO05D008616 1.2e-43 181.4 331 34.4
AagrBONN_evm.TU.Sc2ySwM_228.595 Anthoceros agrestis HOM05D006939 ORTHO05D008616 6.0e-43 179.1 308 38.3
MD08G1128700 Malus domestica HOM05D006939 ORTHO05D008616 1.5e-41 174.5 236 44.5
Mapoly0042s0046 Marchantia polymorpha HOM05D006939 ORTHO05D008616 1.3e-40 171.4 312 37.2
AagrBONN_evm.TU.Sc2ySwM_344.1051 Anthoceros agrestis HOM05D006939 ORTHO05D008616 1.6e-40 171.0 301 36.9
BcaB01g06274 Brassica carinata HOM05D006939 ORTHO05D008616 2.9e-37 160.2 135 61.5
SMO119G0385 Selaginella moellendorffii HOM05D006939 ORTHO05D008616 2.9e-37 160.2 319 31.7
Pp3c5_16590 Physcomitrium patens HOM05D006939 ORTHO05D008616 4.9e-37 159.5 352 30.4
Aqoxy1G02501 Aquilegia oxysepala HOM05D006939 ORTHO05D008616 1.6e-35 154.5 256 42.2
MBI16_g27300_MAGBIO Magnolia biondii HOM05D006939 ORTHO05D008616 2.3e-34 150.6 184 48.4
CDE05G2180 Ceratophyllum demersum HOM05D006939 ORTHO05D008616 2.7e-27 127.1 141 52.5
Os04g0284100 Oryza sativa ssp. japonica HOM05D006939 ORTHO05D008616 7.6e-22 109.0 77 70.1
COL.COLO4_19037 Corchorus olitorius HOM05D000039 ORTHO05D000870 2.8e-16 90.5 141 41.1


User provided reference genes

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