Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G0940 Salvia bowleyana HOM05D003782 ORTHO05D004361 0.0e+00 1867.8 1085 100.0
SalBow7G0271 Salvia bowleyana HOM05D003782 ORTHO05D004361 0.0e+00 1866.3 1085 99.9
MSTRG.14684 Avicennia marina HOM05D003782 ORTHO05D004361 1.0e-274 950.7 1109 54.2
Migut.H01508 Erythranthe guttata HOM05D003782 ORTHO05D004361 2.8e-269 932.6 1095 53.6
SGA_v2.0_scaffold49G18282 Striga asiatica HOM05D003782 ORTHO05D004361 1.1e-252 877.5 1093 50.2
SalBow8G2382 Salvia bowleyana HOM05D003782 ORTHO05D004361 8.0e-232 808.1 1155 46.6
Hma1.2p1_0881F.1_g231940 Hydrangea macrophylla HOM05D003782 ORTHO05D004361 1.1e-212 744.6 883 52.7
Actinidia05612 Actinidia chinensis HOM05D003782 ORTHO05D004361 9.5e-209 731.5 879 51.0
Dinv07533 Davidia involucrata HOM05D003782 ORTHO05D004361 4.1e-204 716.1 836 52.8
Cc02_g13030 Coffea canephora HOM05D003782 ORTHO05D004361 2.1e-203 713.8 849 51.6
CSS0005863 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.3e-202 711.1 821 53.3
Oeu014694.1 Olea europaea HOM05D003782 ORTHO05D004361 1.8e-199 700.7 892 49.4
CAN.G1627.12 Capsicum annuum HOM05D003782 ORTHO05D004361 9.3e-196 688.3 917 49.3
Solyc02g078560.4 Solanum lycopersicum HOM05D003782 ORTHO05D004361 2.3e-194 683.7 864 51.0
Peaxi162Scf00379g00065 Petunia axillaris HOM05D003782 ORTHO05D004361 3.0e-194 683.3 857 51.2
CSS0007425 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.1e-193 681.4 761 54.8
Sopen02g023410 Solanum pennellii HOM05D003782 ORTHO05D004361 3.3e-193 679.9 911 49.5
vmacro03847 Vaccinium macrocarpon HOM05D003782 ORTHO05D004361 2.8e-192 676.8 969 46.3
Dinv40534 Davidia involucrata HOM05D003782 ORTHO05D004361 6.4e-189 665.6 722 55.3
Nitab4.5_0011233g0010 Nicotiana tabacum HOM05D003782 ORTHO05D004361 3.2e-188 663.3 920 47.2
Potri.011G049300 Populus trichocarpa HOM05D003782 ORTHO05D004361 9.3e-188 661.8 824 49.8
Manes.16G025200 Manihot esculenta HOM05D003782 ORTHO05D004361 3.5e-187 659.8 878 47.0
Lsat_1_v5_gn_7_19080 Lactuca sativa HOM05D003782 ORTHO05D004361 3.9e-186 656.4 775 51.6
QL05p039400 Quercus lobata HOM05D003782 ORTHO05D004361 2.5e-185 653.7 829 49.5
Cfa000411 Carpinus fangiana HOM05D003782 ORTHO05D004361 2.8e-184 650.2 850 47.8
Sabra11G0033700 Salix brachista HOM05D003782 ORTHO05D004361 9.0e-183 645.2 836 48.0
Potri.004G039900 Populus trichocarpa HOM05D003782 ORTHO05D004361 1.5e-182 644.4 838 48.4
Haze_06504 Corylus avellana HOM05D003782 ORTHO05D004361 3.4e-182 643.3 838 48.1
Manes.17G043000 Manihot esculenta HOM05D003782 ORTHO05D004361 7.6e-182 642.1 876 46.0
CiPaw.09G056900 Carya illinoinensis HOM05D003782 ORTHO05D004361 3.8e-181 639.8 831 47.9
Thecc.06G191300 Theobroma cacao HOM05D003782 ORTHO05D004361 4.9e-181 639.4 868 48.4
HanXRQChr04g0124181 Helianthus annuus HOM05D003782 ORTHO05D004361 1.2e-179 634.8 812 48.4
CiPaw.10G046700 Carya illinoinensis HOM05D003782 ORTHO05D004361 1.0e-178 631.7 821 48.5
CANSAT35G1194 Cannabis sativa HOM05D003782 ORTHO05D004361 1.8e-178 630.9 815 48.7
DCAR_008048 Daucus carota HOM05D003782 ORTHO05D004361 5.1e-178 629.4 845 47.7
RhsimUnG0044200 Rhododendron simsii HOM05D003782 ORTHO05D004361 5.1e-178 629.4 1066 43.0
GSVIVG01006449001 Vitis vinifera HOM05D003782 ORTHO05D004361 5.1e-178 629.4 908 46.4
Duzib160G0524 Durio zibethinus HOM05D003782 ORTHO05D004361 1.1e-177 628.2 833 48.1
Prupe.4G043300 Prunus persica HOM05D003782 ORTHO05D004361 5.6e-177 625.9 864 48.0
PGR042G3934 Punica granatum HOM05D003782 ORTHO05D004361 1.6e-176 624.4 864 46.9
TAR624G0538 Trochodendron aralioides HOM05D003782 ORTHO05D003724 3.7e-176 623.2 823 48.4
Lj1C1208G1 Lonicera japonica HOM05D003782 ORTHO05D004361 8.1e-176 622.1 746 53.1
Glyma.13G181800 Glycine max HOM05D003782 ORTHO05D004361 1.8e-175 620.9 846 47.2
Glyma.07G194500 Glycine max HOM05D003782 ORTHO05D004361 6.9e-175 619.0 846 47.3
Gohir.A06G125300 Gossypium hirsutum HOM05D003782 ORTHO05D004361 1.5e-174 617.8 833 47.2
MD05G1316600 Malus domestica HOM05D003782 ORTHO05D004361 4.9e-173 612.8 852 46.6
Lj4g0027811 Lotus japonicus HOM05D003782 ORTHO05D004361 1.4e-172 611.3 873 45.9
Gohir.D06G130600 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.5e-172 610.5 883 45.5
MD10G1297100 Malus domestica HOM05D003782 ORTHO05D004361 2.5e-172 610.5 857 46.2
Atru.chr10.1947 Acer truncatum HOM05D003782 ORTHO05D004361 7.1e-172 609.0 857 46.1
HanXRQChr08g0209481 Helianthus annuus HOM05D003782 ORTHO05D004361 1.2e-171 608.2 817 47.0
Phvul.002G226800 Phaseolus vulgaris HOM05D003782 ORTHO05D004361 1.0e-170 605.1 822 47.1
Ciclev10014178m.g Citrus clementina HOM05D003782 ORTHO05D004361 1.3e-170 604.7 884 45.1
TWI38G1173 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.8e-170 604.4 822 46.8
Eucgr.E03352 Eucalyptus grandis HOM05D003782 ORTHO05D004361 6.7e-170 602.4 827 46.4
Nitab4.5_0003668g0120 Nicotiana tabacum HOM05D003782 ORTHO05D004361 1.1e-169 601.7 931 45.1
Aqoxy4G01073 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 7.4e-169 599.0 878 44.6
Gohir.A06G209800 Gossypium hirsutum HOM05D003782 ORTHO05D004361 7.4e-169 599.0 837 46.6
ClCG03G005890 Citrullus lanatus HOM05D003782 ORTHO05D004361 9.6e-169 598.6 841 46.1
MBI17_g03751_MAGBIO Magnolia biondii HOM05D003782 ORTHO05D004361 4.8e-168 596.3 841 46.1
Gorai.010G255000 Gossypium raimondii HOM05D003782 ORTHO05D004361 1.8e-167 594.3 860 45.5
Gohir.D06G211200 Gossypium hirsutum HOM05D003782 ORTHO05D004361 2.4e-167 594.0 860 45.5
VMungo0251G3691 Vigna mungo HOM05D003782 ORTHO05D004361 2.4e-167 594.0 820 46.2
Lalb_Chr05g0218361 Lupinus albus HOM05D003782 ORTHO05D004361 3.4e-166 590.1 836 46.3
RcHm_v2.0_Chr5g0007891 Rosa chinensis HOM05D003782 ORTHO05D004361 1.7e-165 587.8 829 46.9
CsaV3_1G012120 Cucumis sativus L. HOM05D003782 ORTHO05D004361 3.8e-165 586.6 884 44.6
arahy.Tifrunner.gnm1.ann1.1A97AW Arachis hypogaea HOM05D003782 ORTHO05D004361 7.2e-164 582.4 838 44.7
Gorai.010G152400 Gossypium raimondii HOM05D003782 ORTHO05D004361 7.2e-164 582.4 851 45.8
Sed0005800 Sechium edule HOM05D003782 ORTHO05D004361 9.3e-164 582.0 911 43.4
Sc05g0007840 Simmondsia chinensis HOM05D003782 ORTHO05D004361 2.1e-163 580.9 889 44.2
arahy.Tifrunner.gnm1.ann1.2GZF7Z Arachis hypogaea HOM05D003782 ORTHO05D004361 3.6e-163 580.1 838 44.6
BcaC05g24980 Brassica carinata HOM05D003782 ORTHO05D004361 1.1e-161 575.1 828 45.3
FAN16G0824 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.1e-161 575.1 860 44.7
FAN25G2149 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.9e-161 574.3 860 44.5
FAN11G2511 Fragaria x ananassa HOM05D003782 ORTHO05D004361 4.3e-161 573.2 860 44.4
Ca_18527_v3 Cicer arietinum L. HOM05D003782 ORTHO05D004361 1.3e-160 571.6 764 47.9
FAN21G1192 Fragaria x ananassa HOM05D003782 ORTHO05D004361 1.6e-160 571.2 859 44.4
CARHR011250 Cardamine hirsuta HOM05D003782 ORTHO05D004361 4.8e-160 569.7 830 44.0
Hund23698 Selenicereus undatus HOM05D003782 ORTHO05D004361 6.3e-160 569.3 767 47.7
FvH4_3g04800 Fragaria vesca HOM05D003782 ORTHO05D004361 2.4e-159 567.4 859 44.2
TPR.G12054 Trifolium pratense HOM05D003782 ORTHO05D004361 3.1e-159 567.0 948 41.4
C05p09350 Brassica napus HOM05D003782 ORTHO05D004361 4.1e-159 566.6 830 45.3
COL.COLO4_31507 Corchorus olitorius HOM05D003782 ORTHO05D004361 4.1e-159 566.6 979 41.4
C08p48360 Brassica napus HOM05D003782 ORTHO05D004361 1.5e-158 564.7 821 44.3
BolC8t52375H Brassica oleracea HOM05D003782 ORTHO05D004361 1.5e-158 564.7 821 44.3
BraA06t23977Z Brassica rapa HOM05D003782 ORTHO05D004361 2.6e-158 563.9 829 45.0
Lalb_Chr09g0327561 Lupinus albus HOM05D003782 ORTHO05D004361 2.6e-158 563.9 839 44.3
AL1G22040 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 1.7e-157 561.2 828 43.6
arahy.Tifrunner.gnm1.ann1.HPML60 Arachis hypogaea HOM05D003782 ORTHO05D004361 2.2e-157 560.8 801 45.6
Sp1g09750 Schrenkiella parvula HOM05D003782 ORTHO05D004361 2.2e-157 560.8 829 43.9
AT1G61030 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 6.5e-157 559.3 816 43.0
A06p07760 Brassica napus HOM05D003782 ORTHO05D004361 6.5e-157 559.3 829 44.8
Carub.0001s1062 Capsella rubella HOM05D003782 ORTHO05D004361 6.5e-157 559.3 829 44.4
Thhalv10006765m.g Eutrema salsugineum HOM05D003782 ORTHO05D004361 4.2e-156 556.6 829 42.8
BolC5t29675H Brassica oleracea HOM05D003782 ORTHO05D004361 7.2e-156 555.8 858 43.8
AT1G11060 Arabidopsis thaliana HOM05D003782 ORTHO05D004361 1.2e-155 555.1 828 43.8
CARHR052160 Cardamine hirsuta HOM05D003782 ORTHO05D004361 7.9e-155 552.4 825 44.2
Medtr4g089015 Medicago truncatula HOM05D003782 ORTHO05D004361 6.7e-154 549.3 918 40.7
arahy.Tifrunner.gnm1.ann1.AS4EHM Arachis hypogaea HOM05D003782 ORTHO05D004361 2.6e-153 547.4 803 44.2
AL2G15410 Arabidopsis lyrata HOM05D003782 ORTHO05D004361 3.3e-153 547.0 820 43.9
EL10Ac8g20337 Beta vulgaris HOM05D003782 ORTHO05D004361 3.3e-153 547.0 842 44.3
BcaC07g41789 Brassica carinata HOM05D003782 ORTHO05D004361 5.7e-153 546.2 822 43.6
BraA09t41812Z Brassica rapa HOM05D003782 ORTHO05D004361 7.4e-153 545.8 895 41.3
Sp2g03490 Schrenkiella parvula HOM05D003782 ORTHO05D004361 9.7e-153 545.4 822 43.4
Migut.M01185 Erythranthe guttata HOM05D003782 ORTHO05D004361 1.3e-152 545.0 832 44.2
unitig_26.g9369 Utricularia gibba HOM05D003782 ORTHO05D004361 3.7e-152 543.5 885 43.7
Aa31LG1G3850 Aethionema arabicum HOM05D003782 ORTHO05D004361 4.8e-152 543.1 883 41.9
Carub.0002s0417 Capsella rubella HOM05D003782 ORTHO05D004361 4.8e-152 543.1 835 43.0
CDE02G2556 Ceratophyllum demersum HOM05D003782 ORTHO05D004361 6.3e-152 542.7 858 42.4
AUR62016973 Chenopodium quinoa HOM05D003782 ORTHO05D004361 4.1e-151 540.0 829 44.4
AUR62014785 Chenopodium quinoa HOM05D003782 ORTHO05D004361 9.1e-151 538.9 894 42.1
A09p64830 Brassica napus HOM05D003782 ORTHO05D004361 2.0e-150 537.7 885 41.2
Lj6g0013812 Lotus japonicus HOM05D003782 ORTHO05D004361 1.3e-149 535.0 790 43.3
Psat7g113440 Pisum sativum HOM05D003782 ORTHO05D004361 6.1e-147 526.2 943 39.8
Ah.14g089260 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.0e-146 525.4 842 43.6
MELO3C002586.2 Cucumis melo HOM05D003782 ORTHO05D004361 3.0e-146 523.9 945 40.4
Lalb_Chr20g0122011 Lupinus albus HOM05D003782 ORTHO05D004361 3.7e-144 516.9 756 45.2
PSO210G1870 Papaver somniferum HOM05D003782 ORTHO05D004361 1.6e-142 511.5 898 39.6
ATR0680G033 Amborella trichopoda HOM05D003782 ORTHO05D004361 3.5e-142 510.4 822 42.2
Aa31LG2G9560 Aethionema arabicum HOM05D003782 ORTHO05D004361 1.0e-141 508.8 767 43.4
Sed0026382 Sechium edule HOM05D003782 ORTHO05D004361 2.2e-141 507.7 803 42.2
PSO832G0898 Papaver somniferum HOM05D003782 ORTHO05D004361 3.2e-140 503.8 898 39.8
HPP92_014533 Vanilla planifolia HOM05D003782 ORTHO05D004361 2.7e-139 500.7 830 40.6
Sabra04G0024600 Salix brachista HOM05D003782 ORTHO05D004361 3.6e-131 473.8 683 45.4
Os10g0497000 Oryza sativa ssp. japonica HOM05D003782 ORTHO05D004361 1.4e-130 471.9 835 38.4
Zm00001eb220930 Zea mays HOM05D003782 ORTHO05D004361 1.2e-129 468.8 802 40.0
Ah.09g235740 Amaranthus hybridus HOM05D003782 ORTHO05D004361 1.2e-123 448.7 867 40.0
Duzib192G0241 Durio zibethinus HOM05D003782 ORTHO05D004361 2.2e-112 411.4 866 37.6
Duzib235G1248 Durio zibethinus HOM05D003782 ORTHO05D004361 1.6e-110 405.2 867 37.5
ECA236G4595 Erigeron canadensis HOM05D003782 ORTHO05D004361 3.9e-109 400.6 526 48.1
Pp3c9_20340 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.4e-95 355.5 836 34.1
Pp3c9_20349 Physcomitrium patens HOM05D003782 ORTHO05D004361 1.4e-95 355.5 836 34.1
Mapoly0014s0099 Marchantia polymorpha HOM05D003782 ORTHO05D004361 3.0e-93 347.8 921 32.0
Zm00001eb044640 Zea mays HOM05D003782 ORTHO05D004361 7.8e-86 323.2 694 35.7
SMO169G0190 Selaginella moellendorffii HOM05D003782 ORTHO05D004361 4.3e-84 317.4 726 32.9
Cpa.g.sc27.74 Carica papaya HOM05D003782 ORTHO05D004361 6.6e-77 293.5 255 59.6
Aqoxy6G00197 Aquilegia oxysepala HOM05D003782 ORTHO05D004361 1.3e-75 289.3 355 49.9
FAN07G0886 Fragaria x ananassa HOM05D003782 ORTHO05D004361 2.1e-67 261.9 286 52.1
CSS0036804 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.7e-62 245.0 360 47.5
Lj6g0001672 Lotus japonicus HOM05D003782 ORTHO05D004361 5.6e-60 237.3 365 44.7
Oeu043706.1 Olea europaea HOM05D003782 ORTHO05D004361 5.8e-57 227.3 428 41.8
SEGI_34470 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 4.2e-55 221.1 285 47.7
CBR_g19729 Chara braunii HOM05D003782 ORTHO05D004361 9.3e-55 219.9 992 24.7
Lj6g0027699 Lotus japonicus HOM05D003782 ORTHO05D004361 1.6e-46 192.6 262 42.7
SHI01818 Sapria himalayana HOM05D003782 ORTHO05D004361 7.9e-46 190.3 420 34.8
Cpa.g.sc27.75 Carica papaya HOM05D003782 ORTHO05D004361 5.1e-37 161.0 422 33.4
Sabra04G0024500 Salix brachista HOM05D003782 ORTHO05D004361 2.4e-34 152.1 171 50.9
ECA236G3594 Erigeron canadensis HOM05D003782 ORTHO05D004361 1.4e-31 142.9 99 69.7
FAN28G2813 Fragaria x ananassa HOM05D003782 ORTHO05D004361 3.5e-25 121.7 141 51.1
SEGI_13110 Sequoiadendron giganteum HOM05D003782 ORTHO05D004361 5.0e-24 117.9 178 41.6
TWI12G0412 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 1.1e-23 116.7 186 42.5
BcaC05g24978 Brassica carinata HOM05D003782 ORTHO05D004361 7.2e-23 114.0 93 64.5
arahy.Tifrunner.gnm1.ann1.04J95Q Arachis hypogaea HOM05D003782 ORTHO05D004361 1.8e-21 109.4 114 50.9
Zm00001eb006190 Zea mays HOM05D003782 ORTHO05D004361 6.7e-21 107.5 159 41.5
TWI12G0828 Tripterygium wilfordii HOM05D003782 ORTHO05D004361 7.5e-20 104.0 166 42.8
arahy.Tifrunner.gnm1.ann1.M5G8HU Arachis hypogaea HOM05D003782 ORTHO05D004361 8.5e-16 90.5 119 46.2
Zm00001eb335960 Zea mays HOM05D003782 ORTHO05D004361 1.2e-14 86.7 119 43.7
Zm00001eb432110 Zea mays HOM05D003782 ORTHO05D004361 4.7e-14 84.7 89 47.2
Nn1g04009 Nelumbo nucifera HOM05D003782 ORTHO05D004361 1.0e-13 83.6 76 59.2
Zm00001eb179180 Zea mays HOM05D003782 ORTHO05D004361 2.0e-12 79.3 89 44.9
CSS0006007 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 2.6e-12 79.0 61 70.5
arahy.Tifrunner.gnm1.ann1.S76ADD Arachis hypogaea HOM05D001687 ORTHO05D001608 4.4e-12 78.2 110 44.5
VMungo0331G2027 Vigna mungo HOM05D003782 ORTHO05D004361 5.7e-12 77.8 65 58.5
MD09G1213100 Malus domestica HOM05D003782 ORTHO05D004361 9.8e-12 77.0 74 52.7
QL05p013418 Quercus lobata HOM05D003782 ORTHO05D004361 2.2e-11 75.9 56 67.9
VMungo0251G1485 Vigna mungo HOM05D003782 ORTHO05D004361 2.2e-11 75.9 63 60.3
arahy.Tifrunner.gnm1.ann1.IG0W9M Arachis hypogaea HOM05D003782 ORTHO05D004361 8.3e-11 73.9 78 50.0
CARHR034020 Cardamine hirsuta HOM05D003782 ORTHO05D004361 2.4e-10 72.4 92 46.7
CSS0040150 Camellia sinensis var. sinensis HOM05D003782 ORTHO05D004361 1.2e-09 70.1 67 52.2
SHI01816 Sapria himalayana HOM05D005377 ORTHO05D003034 1.2e-09 70.1 106 46.2
arahy.Tifrunner.gnm1.ann1.R5EEB5 Arachis hypogaea HOM05D003782 ORTHO05D004361 1.6e-09 69.7 108 41.7
arahy.Tifrunner.gnm1.ann1.IMK82Y Arachis hypogaea HOM05D003782 ORTHO05D004361 2.7e-09 68.9 105 41.9
ATR0561G103 Amborella trichopoda HOM05D003782 ORTHO05D004361 4.5e-09 68.2 117 41.0
TAR626G0244 Trochodendron aralioides HOM05D003782 ORTHO05D004361 1.7e-08 66.2 60 51.7
Zm00001eb174580 Zea mays HOM05D003782 ORTHO05D004361 2.9e-08 65.5 63 50.8
Glyma.04G160500 Glycine max HOM05D003782 ORTHO05D004361 8.6e-08 63.9 90 43.3
Zm00001eb032810 Zea mays HOM05D003782 ORTHO05D004361 9.5e-07 60.5 64 43.8
Zm00001eb208870 Zea mays HOM05D000229 ORTHO05D004361 2.1e-06 59.3 126 32.5
SHI01815 Sapria himalayana HOM05D003782 ORTHO05D004361 4.7e-06 58.2 93 37.6


User provided reference genes

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