Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G0820 Salvia bowleyana HOM05D007603 ORTHO05D009604 7.0e-102 374.0 196 100.0
MSTRG.14321 Avicennia marina HOM05D007603 ORTHO05D009604 2.7e-61 239.2 223 66.4
Oeu016901.1 Olea europaea HOM05D007603 ORTHO05D009604 7.6e-56 221.1 233 57.9
Oeu036085.1 Olea europaea HOM05D007603 ORTHO05D009604 6.2e-50 201.4 240 55.4
Solyc07g150145.1 Solanum lycopersicum HOM05D007603 ORTHO05D009604 2.4e-41 172.9 238 49.6
Hma1.2p1_0002F.1_g002370 Hydrangea macrophylla HOM05D007603 ORTHO05D009604 1.6e-37 160.2 218 50.9
PGSC0003DMG400009384 Solanum tuberosum HOM05D007603 ORTHO05D009604 1.0e-36 157.5 237 48.5
Nitab4.5_0002629g0010 Nicotiana tabacum HOM05D007603 ORTHO05D009604 6.2e-34 148.3 230 50.4
Sabra13G0102000 Salix brachista HOM05D007603 ORTHO05D009604 1.1e-33 147.5 238 48.3
CSS0037684 Camellia sinensis var. sinensis HOM05D007603 ORTHO05D009604 5.3e-33 145.2 222 47.3
Dinv06842 Davidia involucrata HOM05D007603 ORTHO05D009604 1.5e-32 143.7 227 46.3
Manes.13G141000 Manihot esculenta HOM05D007603 ORTHO05D009604 1.5e-32 143.7 238 45.0
Thecc.02G187900 Theobroma cacao HOM05D007603 ORTHO05D009604 6.4e-31 138.3 230 45.2
Actinidia10989 Actinidia chinensis HOM05D007603 ORTHO05D009604 8.4e-31 137.9 191 49.7
Sed0026242 Sechium edule HOM05D007603 ORTHO05D009604 7.1e-30 134.8 213 47.4
vmacro12353 Vaccinium macrocarpon HOM05D007603 ORTHO05D009604 7.1e-30 134.8 210 48.6
arahy.Tifrunner.gnm1.ann1.M59RYT Arachis hypogaea HOM05D007603 ORTHO05D009604 1.6e-29 133.7 225 45.3
DCAR_013048 Daucus carota HOM05D007603 ORTHO05D009604 1.6e-29 133.7 217 48.4
Potri.013G072200 Populus trichocarpa HOM05D007603 ORTHO05D009604 1.6e-29 133.7 243 46.5
arahy.Tifrunner.gnm1.ann1.76DKB4 Arachis hypogaea HOM05D007603 ORTHO05D009604 2.1e-29 133.3 225 45.8
Potri.013G120700 Populus trichocarpa HOM05D007603 ORTHO05D009604 4.6e-29 132.1 241 46.5
CiPaw.03G182900 Carya illinoinensis HOM05D007603 ORTHO05D009604 1.3e-28 130.6 219 46.1
Sabra13G0062200 Salix brachista HOM05D007603 ORTHO05D009604 1.3e-28 130.6 240 45.8
Dinv39835 Davidia involucrata HOM05D007603 ORTHO05D009604 2.3e-28 129.8 221 46.2
TWI23G0636 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 2.3e-28 129.8 222 47.3
Cc05_g07840 Coffea canephora HOM05D007603 ORTHO05D009604 3.9e-28 129.0 188 49.5
MELO3C018861.2 Cucumis melo HOM05D007603 ORTHO05D009604 3.9e-28 129.0 237 43.0
unitig_749.g13962 Utricularia gibba HOM05D007603 ORTHO05D009604 2.5e-27 126.3 206 46.6
ClCG02G002280 Citrullus lanatus HOM05D007603 ORTHO05D009604 2.8e-26 122.9 231 41.6
Ciclev10017455m.g Citrus clementina HOM05D007603 ORTHO05D009604 3.7e-26 122.5 234 43.2
Atru.chr6.2855 Acer truncatum HOM05D007603 ORTHO05D009604 4.8e-26 122.1 229 44.1
Actinidia11119 Actinidia chinensis HOM05D007603 ORTHO05D009604 1.1e-25 120.9 211 44.5
PGR042G1843 Punica granatum HOM05D007603 ORTHO05D009604 1.4e-25 120.6 240 42.9
Sed0002279 Sechium edule HOM05D007603 ORTHO05D009604 1.8e-25 120.2 216 45.8
Gohir.A03G153900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 3.1e-25 119.4 217 47.5
Sopen07g027470 Solanum pennellii HOM05D007603 ORTHO05D009604 4.0e-25 119.0 241 41.5
Haze_13265 Corylus avellana HOM05D007603 ORTHO05D009604 2.0e-24 116.7 232 43.1
HanXRQChr08g0231781 Helianthus annuus HOM05D007603 ORTHO05D009604 2.0e-24 116.7 198 45.5
Lsat_1_v5_gn_8_137160 Lactuca sativa HOM05D007603 ORTHO05D009604 2.0e-24 116.7 208 45.2
Gohir.D02G176900 Gossypium hirsutum HOM05D007603 ORTHO05D009604 1.0e-23 114.4 218 46.3
Prupe.3G128600 Prunus persica HOM05D007603 ORTHO05D009604 1.3e-23 114.0 225 43.1
TWI14G0603 Tripterygium wilfordii HOM05D007603 ORTHO05D009604 1.3e-23 114.0 221 44.8
PSO541G0270 Papaver somniferum HOM05D007603 ORTHO05D009604 1.7e-23 113.6 240 42.9
CAN.G1543.2 Capsicum annuum HOM05D007603 ORTHO05D009604 3.8e-23 112.5 157 54.1
VMungo1080G0021 Vigna mungo HOM05D007603 ORTHO05D009604 5.5e-22 108.6 213 40.4
QL08p040785 Quercus lobata HOM05D007603 ORTHO05D009604 7.1e-22 108.2 231 39.4
Nitab4.5_0006973g0020 Nicotiana tabacum HOM05D007603 ORTHO05D009604 1.6e-21 107.1 177 50.8
Medtr2g090770 Medicago truncatula HOM05D007603 ORTHO05D009604 3.5e-21 105.9 212 43.4
Glyma.12G207700 Glycine max HOM05D007603 ORTHO05D009604 6.0e-21 105.1 215 44.7
Phvul.005G099400 Phaseolus vulgaris HOM05D007603 ORTHO05D009604 1.3e-20 104.0 213 40.8
BcaC08g44692 Brassica carinata HOM05D007603 ORTHO05D009604 3.0e-20 102.8 211 42.2
C06p22280 Brassica napus HOM05D007603 ORTHO05D009604 3.0e-20 102.8 211 42.2
BolC6t37414H Brassica oleracea HOM05D007603 ORTHO05D009604 3.0e-20 102.8 211 42.2
Lalb_Chr14g0367241 Lupinus albus HOM05D007603 ORTHO05D009604 3.0e-20 102.8 223 39.0
Aqoxy1G02256 Aquilegia oxysepala HOM05D007603 ORTHO05D009604 3.9e-20 102.4 248 40.3
BraA07t29901Z Brassica rapa HOM05D007603 ORTHO05D009604 3.9e-20 102.4 211 42.7
BcaB02g07727 Brassica carinata HOM05D007603 ORTHO05D009604 5.1e-20 102.1 220 42.3
A07p22220 Brassica napus HOM05D007603 ORTHO05D009604 6.7e-20 101.7 211 42.7
Cpa.g.sc50.10 Carica papaya HOM05D007603 ORTHO05D009604 6.7e-20 101.7 259 40.5
Lj3g0007744 Lotus japonicus HOM05D007603 ORTHO05D009604 2.5e-19 99.8 221 41.2
Carub.0005s2128 Capsella rubella HOM05D007603 ORTHO05D009604 4.3e-19 99.0 225 38.7
Thhalv10010720m.g Eutrema salsugineum HOM05D007603 ORTHO05D009604 1.3e-18 97.4 234 39.7
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 2.8e-18 96.3 194 44.3
Aa31sc35G40 Aethionema arabicum HOM05D007603 ORTHO05D009604 6.3e-18 95.1 233 39.5
PSO675G7067 Papaver somniferum HOM05D007603 ORTHO05D009604 6.3e-18 95.1 245 38.8
FAN02G2478 Fragaria x ananassa HOM05D007603 ORTHO05D009604 8.2e-18 94.7 211 43.1
CDE10G1214 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 2.4e-17 93.2 209 40.7
AT3G54680 Arabidopsis thaliana HOM05D007603 ORTHO05D009604 9.0e-17 91.3 221 37.6
SalBow7G4116 Salvia bowleyana HOM05D007603 ORTHO05D009604 4.5e-16 89.0 51 90.2
AL5G35760 Arabidopsis lyrata HOM05D007603 ORTHO05D009604 7.7e-16 88.2 221 38.5
TPR.G6485 Trifolium pratense HOM05D007603 ORTHO05D009604 7.7e-16 88.2 213 39.4
Glyma.13G293400 Glycine max HOM05D007603 ORTHO05D009604 1.0e-15 87.8 212 41.0
Nn1g04268 Nelumbo nucifera HOM05D007603 ORTHO05D009604 1.0e-15 87.8 249 36.9
Psat5g274200 Pisum sativum HOM05D007603 ORTHO05D009604 1.3e-15 87.4 210 37.6
CDE10G0532 Ceratophyllum demersum HOM05D007603 ORTHO05D009604 2.9e-15 86.3 213 38.5
Sp5g07770 Schrenkiella parvula HOM05D007603 ORTHO05D009604 2.9e-15 86.3 237 38.4
TAR624G0387 Trochodendron aralioides HOM05D007603 ORTHO05D009604 6.5e-15 85.1 146 45.9
THA.LOC104825256 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 8.5e-15 84.7 226 39.4
CARHR164600 Cardamine hirsuta HOM05D007603 ORTHO05D009604 1.1e-14 84.3 235 36.6
THA.LOC104823514 Tarenaya hassleriana HOM05D007603 ORTHO05D009604 4.2e-14 82.4 249 35.7
CsaV3_7G003160 Cucumis sativus L. HOM05D007603 ORTHO05D009604 1.6e-13 80.5 171 41.5
BcaB01g00169 Brassica carinata HOM05D007603 ORTHO05D009604 1.0e-12 77.8 201 37.8
BcaC07g39795 Brassica carinata HOM05D007603 ORTHO05D009604 1.4e-12 77.4 203 37.9
FAN14G3046 Fragaria x ananassa HOM05D007603 ORTHO05D016291 1.8e-12 77.0 195 41.5
A09p47630 Brassica napus HOM05D007603 ORTHO05D009604 2.3e-12 76.6 203 38.4
Hund01003 Selenicereus undatus HOM05D007603 ORTHO05D009604 5.1e-12 75.5 233 36.9
EL10Ac9g20838 Beta vulgaris HOM05D007603 ORTHO05D009604 2.8e-10 69.7 230 35.7
C08p29830 Brassica napus HOM05D007603 ORTHO05D009604 2.8e-10 69.7 195 36.9
Rhsim06G0135700 Rhododendron simsii HOM05D007603 ORTHO05D009604 2.4e-09 66.6 101 45.5
Hund07856 Selenicereus undatus HOM05D007603 ORTHO05D009604 4.1e-09 65.9 95 47.4
FAN09G3062 Fragaria x ananassa HOM05D007603 ORTHO05D009604 6.9e-09 65.1 132 41.7
MBI06_g00805_MAGBIO Magnolia biondii HOM05D007603 ORTHO05D009604 1.5e-08 63.9 165 39.4
BolC8t50594H Brassica oleracea HOM05D007603 ORTHO05D009604 4.5e-08 62.4 195 35.9
AUR62036075 Chenopodium quinoa HOM05D007603 ORTHO05D009604 7.7e-08 61.6 228 32.9
AUR62043430 Chenopodium quinoa HOM05D007603 ORTHO05D009604 1.3e-07 60.8 234 30.8


User provided reference genes

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