Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G0633 Salvia bowleyana HOM05D000955 ORTHO05D003340 3.8e-41 171.0 83 100.0
SalBow7G3079 Salvia bowleyana HOM05D000955 ORTHO05D003340 1.8e-11 72.4 50 68.0
Migut.C00587 Erythranthe guttata HOM05D000955 ORTHO05D003340 7.0e-11 70.5 50 70.0
COL.COLO4_26485 Corchorus olitorius HOM05D000955 ORTHO05D003340 5.9e-10 67.4 49 57.1
COL.COLO4_26486 Corchorus olitorius HOM05D000955 ORTHO05D003340 3.8e-09 64.7 49 55.1
DCAR_008791 Daucus carota HOM05D000955 ORTHO05D003340 3.8e-09 64.7 49 57.1
Lj4C54T13 Lonicera japonica HOM05D000955 ORTHO05D003340 5.0e-09 64.3 66 51.5
Gohir.D02G091750 Gossypium hirsutum HOM05D000955 ORTHO05D003340 6.5e-09 63.9 58 46.6
Manes.18G035800 Manihot esculenta HOM05D000955 ORTHO05D003340 8.5e-09 63.5 49 53.1
SalBow7G0951 Salvia bowleyana HOM05D000955 ORTHO05D003340 8.5e-09 63.5 46 63.0
Migut.C00586 Erythranthe guttata HOM05D000955 ORTHO05D003340 1.1e-08 63.2 49 59.2
Nn5g30250 Nelumbo nucifera HOM05D000955 ORTHO05D003340 1.1e-08 63.2 50 52.0
Psat6g013520 Pisum sativum HOM05D000955 ORTHO05D003340 1.1e-08 63.2 49 63.3
vmacro04455 Vaccinium macrocarpon HOM05D000955 ORTHO05D003340 1.5e-08 62.8 48 60.4
CDE08G0020 Ceratophyllum demersum HOM05D000955 ORTHO05D003340 1.9e-08 62.4 50 60.0
Psat6g013640 Pisum sativum HOM05D000955 ORTHO05D003340 1.9e-08 62.4 63 50.8
Thecc.08G010100 Theobroma cacao HOM05D000955 ORTHO05D003340 1.9e-08 62.4 48 56.2
TPR.G10919 Trifolium pratense HOM05D000955 ORTHO05D003340 1.9e-08 62.4 49 61.2
Psat6g013560 Pisum sativum HOM05D000955 ORTHO05D003340 2.5e-08 62.0 49 61.2
MBI02_g02963_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 3.2e-08 61.6 49 57.1
Medtr1g019720 Medicago truncatula HOM05D000955 ORTHO05D003340 3.2e-08 61.6 49 59.2
Oeu004829.1 Olea europaea HOM05D000955 ORTHO05D003340 3.2e-08 61.6 50 56.0
Psat6g013720 Pisum sativum HOM05D000955 ORTHO05D003340 3.2e-08 61.6 49 59.2
vmacro21529 Vaccinium macrocarpon HOM05D000955 ORTHO05D003340 4.2e-08 61.2 49 55.1
Cc10_g04230 Coffea canephora HOM05D000955 ORTHO05D003340 5.5e-08 60.8 49 59.2
HanXRQChr05g0137741 Helianthus annuus HOM05D000955 ORTHO05D003340 5.5e-08 60.8 65 43.1
Nitab4.5_0001580g0040 Nicotiana tabacum HOM05D000955 ORTHO05D003340 5.5e-08 60.8 48 52.1
Rhsim07G0228900 Rhododendron simsii HOM05D000955 ORTHO05D003340 5.5e-08 60.8 63 50.8
TPR.G17533 Trifolium pratense HOM05D000955 ORTHO05D003340 5.5e-08 60.8 48 62.5
TPR.G17546 Trifolium pratense HOM05D000955 ORTHO05D003340 5.5e-08 60.8 49 59.2
Psat6g013600 Pisum sativum HOM05D000955 ORTHO05D003340 7.2e-08 60.5 49 55.1
Rhsim07G0229000 Rhododendron simsii HOM05D000955 ORTHO05D003340 7.2e-08 60.5 49 59.2
Gohir.D06G015900 Gossypium hirsutum HOM05D000955 ORTHO05D003340 9.4e-08 60.1 49 55.1
Gorai.005G102900 Gossypium raimondii HOM05D000955 ORTHO05D003340 9.4e-08 60.1 48 50.0
Medtr1g019715 Medicago truncatula HOM05D000955 ORTHO05D003340 9.4e-08 60.1 49 61.2
Nitab4.5_0007986g0020 Nicotiana tabacum HOM05D000955 ORTHO05D003340 9.4e-08 60.1 49 51.0
Aqoxy6G01348 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 1.2e-07 59.7 64 45.3
Gohir.A06G017600 Gossypium hirsutum HOM05D000955 ORTHO05D003340 1.2e-07 59.7 46 56.5
Gorai.010G018500 Gossypium raimondii HOM05D000955 ORTHO05D003340 1.6e-07 59.3 49 55.1
Nitab4.5_0006312g0020 Nicotiana tabacum HOM05D000955 ORTHO05D003340 1.6e-07 59.3 48 54.2
Peaxi162Scf00064g00025 Petunia axillaris HOM05D000955 ORTHO05D003340 1.6e-07 59.3 49 51.0
Peaxi162Scf01073g00017 Petunia axillaris HOM05D000955 ORTHO05D003340 1.6e-07 59.3 48 60.4
Rhsim07G0229500 Rhododendron simsii HOM05D000955 ORTHO05D003340 1.6e-07 59.3 49 57.1
CSS0029458 Camellia sinensis var. sinensis HOM05D000955 ORTHO05D003340 2.1e-07 58.9 49 53.1
Gohir.D06G015700 Gossypium hirsutum HOM05D000955 ORTHO05D003340 2.1e-07 58.9 49 55.1
Rhsim07G0229400 Rhododendron simsii HOM05D000955 ORTHO05D003340 2.7e-07 58.5 49 59.2
Sabra14G0021800 Salix brachista HOM05D000955 ORTHO05D003340 2.7e-07 58.5 48 54.2
Gohir.A06G017700 Gossypium hirsutum HOM05D000955 ORTHO05D003340 3.6e-07 58.2 49 53.1
Gorai.010G018700 Gossypium raimondii HOM05D000955 ORTHO05D003340 3.6e-07 58.2 49 53.1
HanXRQChr09g0267871 Helianthus annuus HOM05D000955 ORTHO05D003340 3.6e-07 58.2 49 49.0
Peaxi162Scf00064g00006 Petunia axillaris HOM05D000955 ORTHO05D003340 3.6e-07 58.2 49 55.1
Ca_13297_v3 Cicer arietinum L. HOM05D000955 ORTHO05D003340 4.7e-07 57.8 48 58.3
CAN.G1518.2 Capsicum annuum HOM05D000955 ORTHO05D003340 6.1e-07 57.4 49 51.0
DCAR_008793 Daucus carota HOM05D000955 ORTHO05D003340 6.1e-07 57.4 49 55.1
Rhsim07G0229100 Rhododendron simsii HOM05D000955 ORTHO05D003340 8.0e-07 57.0 49 55.1
Rhsim07G0229300 Rhododendron simsii HOM05D000955 ORTHO05D003340 8.0e-07 57.0 67 46.3
CAN.G1518.1 Capsicum annuum HOM05D000955 ORTHO05D003340 1.0e-06 56.6 50 54.0
DCAR_008792 Daucus carota HOM05D000955 ORTHO05D003340 1.0e-06 56.6 49 55.1
Gohir.A06G018100 Gossypium hirsutum HOM05D000955 ORTHO05D003340 1.4e-06 56.2 49 53.1
Gohir.D06G016000 Gossypium hirsutum HOM05D000955 ORTHO05D003340 1.4e-06 56.2 49 53.1
Gorai.010G018800 Gossypium raimondii HOM05D000955 ORTHO05D003340 1.4e-06 56.2 49 53.1
Peaxi162Scf00064g00002 Petunia axillaris HOM05D000955 ORTHO05D003340 1.4e-06 56.2 48 56.2
Gohir.D06G016100 Gossypium hirsutum HOM05D000955 ORTHO05D003340 1.8e-06 55.8 49 53.1
Potri.002G127000 Populus trichocarpa HOM05D000955 ORTHO05D003340 1.8e-06 55.8 45 53.3
CAN.G371.22 Capsicum annuum HOM05D000955 ORTHO05D001429 2.3e-06 55.5 63 41.3
Nitab4.5_0000686g0110 Nicotiana tabacum HOM05D000955 ORTHO05D003340 2.3e-06 55.5 49 46.9
Potri.014G030500 Populus trichocarpa HOM05D000955 ORTHO05D003340 2.3e-06 55.5 49 49.0
ECA232G3034 Erigeron canadensis HOM05D000955 ORTHO05D003340 3.0e-06 55.1 49 46.9
Gohir.D06G015800 Gossypium hirsutum HOM05D000955 ORTHO05D003340 3.0e-06 55.1 65 46.2
Os07g0619200 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 3.0e-06 55.1 49 53.1
Solyc04g079080.2 Solanum lycopersicum HOM05D000955 ORTHO05D003340 3.0e-06 55.1 48 50.0
Solyc12g088850.1 Solanum lycopersicum HOM05D000955 ORTHO05D003340 3.0e-06 55.1 50 54.0
Sopen04g032690 Solanum pennellii HOM05D000955 ORTHO05D003340 3.0e-06 55.1 48 50.0
Sopen12g030740 Solanum pennellii HOM05D000955 ORTHO05D003340 3.0e-06 55.1 50 54.0
MBI06_g36647_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 4.0e-06 54.7 49 53.1
Rhsim07G0229200 Rhododendron simsii HOM05D000955 ORTHO05D003340 4.0e-06 54.7 49 55.1
ATR0100G031 Amborella trichopoda HOM05D000955 ORTHO05D003340 5.2e-06 54.3 50 48.0
ECA246G3551 Erigeron canadensis HOM05D000955 ORTHO05D003340 5.2e-06 54.3 51 52.9
Sabra02G0099500 Salix brachista HOM05D000955 ORTHO05D003340 5.2e-06 54.3 48 50.0
Sopen12g030750 Solanum pennellii HOM05D000955 ORTHO05D003340 5.2e-06 54.3 63 46.0
Glyma.06G039300 Glycine max HOM05D000955 ORTHO05D003340 6.8e-06 53.9 66 43.9
HPP92_004112 Vanilla planifolia HOM05D000955 ORTHO05D003340 6.8e-06 53.9 50 52.0
Aqoxy5G01248 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 8.8e-06 53.5 50 52.0
ECA246G2186 Erigeron canadensis HOM05D000955 ORTHO05D003340 8.8e-06 53.5 50 56.0
Gohir.A06G017800 Gossypium hirsutum HOM05D000955 ORTHO05D003340 8.8e-06 53.5 49 49.0
Solyc12g088860.2 Solanum lycopersicum HOM05D000955 ORTHO05D003340 8.8e-06 53.5 50 50.0


User provided reference genes

Program Settings