Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G0627 Salvia bowleyana HOM05D000174 ORTHO05D001106 3.0e-44 181.4 90 100.0
SalBow4G1265 Salvia bowleyana HOM05D000174 ORTHO05D001106 3.3e-30 134.8 86 83.7
Migut.F01919 Erythranthe guttata HOM05D000174 ORTHO05D001106 1.1e-20 103.2 91 64.8
MSTRG.27495 Avicennia marina HOM05D000174 ORTHO05D001106 4.9e-18 94.4 87 59.8
MSTRG.9137 Avicennia marina HOM05D000174 ORTHO05D001106 1.9e-17 92.4 91 54.9
SGA_v2.0_scaffold62G21372 Striga asiatica HOM05D000174 ORTHO05D001106 5.4e-17 90.9 88 58.0
Migut.F01698 Erythranthe guttata HOM05D000174 ORTHO05D001106 1.3e-15 86.3 87 57.5
SalBow6G1176 Salvia bowleyana HOM05D000174 ORTHO05D001106 2.5e-14 82.0 87 54.0
Sopen11g003900 Solanum pennellii HOM05D000174 ORTHO05D001106 4.4e-11 71.2 94 46.8
PGSC0003DMG402031064 Solanum tuberosum HOM05D000174 ORTHO05D001106 9.9e-11 70.1 93 43.0
DCAR_019072 Daucus carota HOM05D000174 ORTHO05D001106 1.3e-10 69.7 93 44.1
HanXRQChr16g0506351 Helianthus annuus HOM05D000174 ORTHO05D001106 1.7e-10 69.3 86 46.5
Nitab4.5_0004987g0070 Nicotiana tabacum HOM05D000174 ORTHO05D001106 2.2e-10 68.9 97 42.3
Peaxi162Scf00176g00164 Petunia axillaris HOM05D000174 ORTHO05D001106 2.2e-10 68.9 94 43.6
Oeu046647.1 Olea europaea HOM05D000174 ORTHO05D001106 2.9e-10 68.6 82 51.2
Solyc05g055500.1 Solanum lycopersicum HOM05D000174 ORTHO05D001106 2.9e-10 68.6 103 41.7
SGA_v2.0_scaffold2G01338 Striga asiatica HOM05D000174 ORTHO05D001106 8.4e-10 67.0 88 47.7
Nitab4.5_0000096g0250 Nicotiana tabacum HOM05D000174 ORTHO05D001106 1.1e-09 66.6 96 42.7
CAN.G459.25 Capsicum annuum HOM05D000174 ORTHO05D001106 1.4e-09 66.2 91 42.9
Gohir.A09G144800 Gossypium hirsutum HOM05D000174 ORTHO05D001106 2.4e-09 65.5 89 43.8
Sopen05g033950 Solanum pennellii HOM05D000174 ORTHO05D001106 3.2e-09 65.1 102 41.2
CSS0023037 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D001106 5.4e-09 64.3 90 46.7
CSS0038838 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D001106 5.4e-09 64.3 90 46.7
FvH4_7g18360 Fragaria vesca HOM05D000174 ORTHO05D001106 5.4e-09 64.3 95 45.3
Gohir.D09G140600 Gossypium hirsutum HOM05D000174 ORTHO05D001106 5.4e-09 64.3 89 43.8
Gorai.006G161200 Gossypium raimondii HOM05D000174 ORTHO05D001106 5.4e-09 64.3 89 43.8
FAN01G1717 Fragaria x ananassa HOM05D000174 ORTHO05D001106 7.1e-09 63.9 95 41.1
FAN10G1214 Fragaria x ananassa HOM05D000174 ORTHO05D001106 9.3e-09 63.5 95 42.1
FAN10G3836 Fragaria x ananassa HOM05D000174 ORTHO05D001106 9.3e-09 63.5 95 42.1
Medtr1g062780 Medicago truncatula HOM05D000174 ORTHO05D001106 9.3e-09 63.5 88 43.2
Nitab4.5_0007723g0020 Nicotiana tabacum HOM05D000174 ORTHO05D001106 9.3e-09 63.5 99 39.4
Peaxi162Scf00982g00026 Petunia axillaris HOM05D000174 ORTHO05D001106 9.3e-09 63.5 93 43.0
FAN03G1516 Fragaria x ananassa HOM05D000174 ORTHO05D001106 1.2e-08 63.2 95 41.1
Lsat_1_v5_gn_2_103521 Lactuca sativa HOM05D000174 ORTHO05D001106 1.2e-08 63.2 94 45.7
CAN.G694.43 Capsicum annuum HOM05D000174 ORTHO05D001106 1.6e-08 62.8 104 42.3
Gohir.D05G088100 Gossypium hirsutum HOM05D000174 ORTHO05D001106 1.6e-08 62.8 92 40.2
FAN06G1943 Fragaria x ananassa HOM05D000174 ORTHO05D001106 2.1e-08 62.4 95 44.2
FAN06G3670 Fragaria x ananassa HOM05D000174 ORTHO05D001106 2.1e-08 62.4 95 44.2
Cc02_g10680 Coffea canephora HOM05D000174 ORTHO05D001106 2.7e-08 62.0 100 41.0
Manes.08G012900 Manihot esculenta HOM05D000174 ORTHO05D001106 2.7e-08 62.0 86 44.2
unitig_32.g11902 Utricularia gibba HOM05D000174 ORTHO05D001106 2.7e-08 62.0 83 43.4
Thecc.05G071300 Theobroma cacao HOM05D000174 ORTHO05D001106 3.5e-08 61.6 87 43.7
Lj2C23T12 Lonicera japonica HOM05D000174 ORTHO05D001106 6.0e-08 60.8 94 43.6
Manes.09G062200 Manihot esculenta HOM05D000174 ORTHO05D001106 6.0e-08 60.8 85 44.7
Nn2g13856 Nelumbo nucifera HOM05D000174 ORTHO05D001106 7.8e-08 60.5 88 40.9
Sc20g0005670 Simmondsia chinensis HOM05D000174 ORTHO05D001106 7.8e-08 60.5 87 39.1
Manes.10G052000 Manihot esculenta HOM05D000174 ORTHO05D001106 1.0e-07 60.1 90 43.3
Cfa017654 Carpinus fangiana HOM05D000174 ORTHO05D001106 1.3e-07 59.7 96 40.6
Manes.07G095100 Manihot esculenta HOM05D000174 ORTHO05D001106 1.3e-07 59.7 92 42.4
Aqoxy2G01654 Aquilegia oxysepala HOM05D000174 ORTHO05D001106 1.7e-07 59.3 88 40.9
Gohir.A05G086800 Gossypium hirsutum HOM05D000174 ORTHO05D001106 1.7e-07 59.3 94 39.4
TWI15G0653 Tripterygium wilfordii HOM05D000174 ORTHO05D001106 1.7e-07 59.3 91 44.0
CARHR121090 Cardamine hirsuta HOM05D000174 ORTHO05D001106 2.3e-07 58.9 91 40.7
HanXRQChr09g0248601 Helianthus annuus HOM05D000174 ORTHO05D001106 2.3e-07 58.9 98 38.8
Oeu005292.1 Olea europaea HOM05D000174 ORTHO05D001106 2.3e-07 58.9 85 40.0
RcHm_v2.0_Chr1g0362171 Rosa chinensis HOM05D000174 ORTHO05D001106 2.3e-07 58.9 97 43.3
Sabra04G0147500 Salix brachista HOM05D000174 ORTHO05D001106 2.3e-07 58.9 90 41.1
vmacro10256 Vaccinium macrocarpon HOM05D000174 ORTHO05D001106 2.3e-07 58.9 90 38.9
BcaB06g28195 Brassica carinata HOM05D000174 ORTHO05D001106 3.0e-07 58.5 90 40.0
Ca_10445_v3 Cicer arietinum L. HOM05D000174 ORTHO05D001106 3.0e-07 58.5 89 40.4
FAN09G1725 Fragaria x ananassa HOM05D000174 ORTHO05D001106 3.0e-07 58.5 96 40.6
Gorai.009G412900 Gossypium raimondii HOM05D000174 ORTHO05D001106 3.0e-07 58.5 90 42.2
AT2G28200 Arabidopsis thaliana HOM05D000174 ORTHO05D001106 3.9e-07 58.2 87 39.1
Ciclev10012395m.g Citrus clementina HOM05D000174 ORTHO05D001106 3.9e-07 58.2 95 42.1
Glyma.13G146400 Glycine max HOM05D000174 ORTHO05D001106 3.9e-07 58.2 94 43.6
QL07p042303 Quercus lobata HOM05D000174 ORTHO05D001106 3.9e-07 58.2 85 41.2
Actinidia24148 Actinidia chinensis HOM05D000174 ORTHO05D001106 5.1e-07 57.8 85 42.4
Cfa001783 Carpinus fangiana HOM05D000174 ORTHO05D001106 5.1e-07 57.8 91 40.7
ClCG10G019900 Citrullus lanatus HOM05D000174 ORTHO05D001106 5.1e-07 57.8 91 39.6
Gohir.D04G108900 Gossypium hirsutum HOM05D000174 ORTHO05D001106 5.1e-07 57.8 90 42.2
Phvul.007G139600 Phaseolus vulgaris HOM05D000174 ORTHO05D001106 5.1e-07 57.8 93 37.6
Potri.004G216900 Populus trichocarpa HOM05D000174 ORTHO05D001106 5.1e-07 57.8 88 39.8
Sabra09G0002200 Salix brachista HOM05D000174 ORTHO05D001106 5.1e-07 57.8 92 44.6
Sabra10G0177900 Salix brachista HOM05D000174 ORTHO05D001106 5.1e-07 57.8 94 43.6
Cpa.g.sc53.160 Carica papaya HOM05D000174 ORTHO05D001106 6.6e-07 57.4 93 41.9
Dinv29382 Davidia involucrata HOM05D000174 ORTHO05D001106 6.6e-07 57.4 87 41.4
Duzib093G2175 Durio zibethinus HOM05D000174 ORTHO05D001106 6.6e-07 57.4 88 42.0
Duzib128G1064 Durio zibethinus HOM05D000174 ORTHO05D001106 6.6e-07 57.4 88 40.9
Oeu016300.1 Olea europaea HOM05D000174 ORTHO05D001106 6.6e-07 57.4 88 44.3
AL4G21930 Arabidopsis lyrata HOM05D000174 ORTHO05D001106 8.7e-07 57.0 85 38.8
Cpa.g.sc92.92 Carica papaya HOM05D000174 ORTHO05D001106 8.7e-07 57.0 89 39.3
MELO3C012393.2 Cucumis melo HOM05D000174 ORTHO05D001106 8.7e-07 57.0 87 40.2
DCAR_015505 Daucus carota HOM05D000174 ORTHO05D001106 8.7e-07 57.0 90 42.2
FvH4_6g16820 Fragaria vesca HOM05D000174 ORTHO05D001106 8.7e-07 57.0 96 40.6
FAN14G4276 Fragaria x ananassa HOM05D000174 ORTHO05D001106 8.7e-07 57.0 96 40.6
Hma1.2p1_0547F.1_g176560 Hydrangea macrophylla HOM05D000174 ORTHO05D001106 8.7e-07 57.0 87 43.7
Potri.009G004800 Populus trichocarpa HOM05D000174 ORTHO05D001106 8.7e-07 57.0 90 41.1
VMungo0720G1980 Vigna mungo HOM05D000174 ORTHO05D001106 8.7e-07 57.0 93 37.6
Lj5g0000607 Lotus japonicus HOM05D000174 ORTHO05D001106 1.1e-06 56.6 97 42.3
Prupe.7G125800 Prunus persica HOM05D000174 ORTHO05D001106 1.1e-06 56.6 96 41.7
Rhsim03G0112400 Rhododendron simsii HOM05D000174 ORTHO05D001106 1.1e-06 56.6 85 40.0
Rhsim09G0146000 Rhododendron simsii HOM05D000174 ORTHO05D001106 1.1e-06 56.6 90 42.2
CsaV3_5G035890 Cucumis sativus L. HOM05D000174 ORTHO05D001106 1.5e-06 56.2 87 41.4
Eucgr.J01041 Eucalyptus grandis HOM05D000174 ORTHO05D001106 1.5e-06 56.2 93 39.8
FAN05G0879 Fragaria x ananassa HOM05D000174 ORTHO05D001106 1.5e-06 56.2 95 38.9
FAN05G2513 Fragaria x ananassa HOM05D000174 ORTHO05D001106 1.5e-06 56.2 95 38.9
Lsat_1_v5_gn_6_28380 Lactuca sativa HOM05D000174 ORTHO05D001106 1.5e-06 56.2 85 40.0
Lalb_Chr02g0155451 Lupinus albus HOM05D000174 ORTHO05D001106 1.5e-06 56.2 100 40.0
Sp4g11010 Schrenkiella parvula HOM05D000174 ORTHO05D001106 1.5e-06 56.2 88 39.8
Solyc11g066400.1 Solanum lycopersicum HOM05D000174 ORTHO05D001106 1.5e-06 56.2 90 38.9
Atru.chr8.1752 Acer truncatum HOM05D000174 ORTHO05D001106 1.9e-06 55.8 106 36.8
Actinidia38883 Actinidia chinensis HOM05D000174 ORTHO05D001106 1.9e-06 55.8 85 37.6
A04p21400 Brassica napus HOM05D000174 ORTHO05D001106 1.9e-06 55.8 88 39.8
BraA04t17707Z Brassica rapa HOM05D000174 ORTHO05D001106 1.9e-06 55.8 88 39.8
Gohir.A04G070400 Gossypium hirsutum HOM05D000174 ORTHO05D001106 1.9e-06 55.8 88 45.5
Gorai.009G090200 Gossypium raimondii HOM05D000174 ORTHO05D001106 1.9e-06 55.8 95 37.9
Potri.008G032300 Populus trichocarpa HOM05D000174 ORTHO05D001106 1.9e-06 55.8 92 41.3
Prupe.2G205700 Prunus persica HOM05D000174 ORTHO05D001106 1.9e-06 55.8 98 41.8
TWI79G0861 Tripterygium wilfordii HOM05D000174 ORTHO05D001106 1.9e-06 55.8 90 38.9
Aa31LG5G7950 Aethionema arabicum HOM05D000174 ORTHO05D001106 2.5e-06 55.5 85 37.6
Carub.0004s0901 Capsella rubella HOM05D000174 ORTHO05D001106 2.5e-06 55.5 86 38.4
CsaV3_6G014410 Cucumis sativus L. HOM05D000174 ORTHO05D001106 2.5e-06 55.5 85 36.5
Glyma.10G197200 Glycine max HOM05D000174 ORTHO05D001106 2.5e-06 55.5 93 35.5
Hma1.2p1_0117F.1_g056420 Hydrangea macrophylla HOM05D000174 ORTHO05D001106 2.5e-06 55.5 95 40.0
Sed0021227 Sechium edule HOM05D000174 ORTHO05D001106 2.5e-06 55.5 86 41.9
TWI31G0433 Tripterygium wilfordii HOM05D000174 ORTHO05D001106 2.5e-06 55.5 89 38.2
TWI79G1174 Tripterygium wilfordii HOM05D000174 ORTHO05D001106 2.5e-06 55.5 90 37.8
FAN02G1945 Fragaria x ananassa HOM05D000174 ORTHO05D001106 3.3e-06 55.1 96 40.6
THA.LOC104801514 Tarenaya hassleriana HOM05D000174 ORTHO05D001106 3.3e-06 55.1 86 39.5
Gohir.A01G214200 Gossypium hirsutum HOM05D000174 ORTHO05D001106 4.3e-06 54.7 87 41.4
Lsat_1_v5_gn_9_71281 Lactuca sativa HOM05D000174 ORTHO05D001106 4.3e-06 54.7 94 40.4
Potri.010G229400 Populus trichocarpa HOM05D000174 ORTHO05D001106 4.3e-06 54.7 92 41.3
RcHm_v2.0_Chr3g0470831 Rosa chinensis HOM05D000174 ORTHO05D001106 4.3e-06 54.7 96 38.5
PGSC0003DMG400000418 Solanum tuberosum HOM05D000174 ORTHO05D001106 4.3e-06 54.7 89 37.1
MSTRG.10333 Avicennia marina HOM05D000174 ORTHO05D001106 5.6e-06 54.3 90 42.2
CAN.G900.2 Capsicum annuum HOM05D000174 ORTHO05D001106 5.6e-06 54.3 90 42.2
MELO3C000391.2 Cucumis melo HOM05D000174 ORTHO05D001106 5.6e-06 54.3 85 38.8
DCAR_032185 Daucus carota HOM05D000174 ORTHO05D001106 5.6e-06 54.3 95 37.9
Duzib168G1582 Durio zibethinus HOM05D000174 ORTHO05D001106 5.6e-06 54.3 88 38.6
Thhalv10016842m.g Eutrema salsugineum HOM05D000174 ORTHO05D001106 5.6e-06 54.3 87 39.1
Oeu016994.1 Olea europaea HOM05D000174 ORTHO05D001106 5.6e-06 54.3 85 43.5
THA.LOC104815735 Tarenaya hassleriana HOM05D000174 ORTHO05D001106 5.6e-06 54.3 85 37.6
ATR0329G012 Amborella trichopoda HOM05D000174 ORTHO05D001106 7.3e-06 53.9 86 43.0
Cpa.g.sc163.32 Carica papaya HOM05D000174 ORTHO05D000795 7.3e-06 53.9 83 43.4
CiPaw.01G266300 Carya illinoinensis HOM05D000174 ORTHO05D001106 7.3e-06 53.9 93 37.6
Cc06_g04520 Coffea canephora HOM05D000174 ORTHO05D001106 7.3e-06 53.9 96 41.7
Haze_16762 Corylus avellana HOM05D000174 ORTHO05D001106 7.3e-06 53.9 91 38.5
DCAR_018762 Daucus carota HOM05D000174 ORTHO05D001106 7.3e-06 53.9 84 39.3
Glyma.10G059700 Glycine max HOM05D000174 ORTHO05D001106 7.3e-06 53.9 94 37.2
Glyma.13G321900 Glycine max HOM05D000174 ORTHO05D001106 7.3e-06 53.9 106 35.8
Lsat_1_v5_gn_1_51300 Lactuca sativa HOM05D000174 ORTHO05D001106 7.3e-06 53.9 91 39.6
Lalb_Chr01g0018601 Lupinus albus HOM05D000174 ORTHO05D001106 7.3e-06 53.9 92 42.4
PSO648G0109 Papaver somniferum HOM05D000174 ORTHO05D001106 7.3e-06 53.9 85 35.3
Sc09g0005920 Simmondsia chinensis HOM05D000174 ORTHO05D001106 7.3e-06 53.9 99 34.3
Manes.04G012800 Manihot esculenta HOM05D000174 ORTHO05D001106 9.6e-06 53.5 86 40.7
Sabra08G0021300 Salix brachista HOM05D000174 ORTHO05D001106 9.6e-06 53.5 92 40.2
PGSC0003DMG400003872 Solanum tuberosum HOM05D000174 ORTHO05D001106 9.6e-06 53.5 97 36.1


User provided reference genes

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