Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G0487 Salvia bowleyana HOM05D002105 ORTHO05D001271 9.9e-44 179.9 100 100.0
Migut.H01943 Erythranthe guttata HOM05D002105 ORTHO05D001271 1.3e-14 83.2 72 65.3
Oeu019314.1 Olea europaea HOM05D002105 ORTHO05D001271 2.0e-12 75.9 85 56.5
Prupe.4G180600 Prunus persica HOM05D002105 ORTHO05D001271 2.0e-12 75.9 86 58.1
MD03G1228300 Malus domestica HOM05D002105 ORTHO05D001271 3.4e-12 75.1 67 65.7
MD11G1247800 Malus domestica HOM05D002105 ORTHO05D001271 4.5e-12 74.7 67 65.7
Oeu051068.1 Olea europaea HOM05D002105 ORTHO05D001271 5.8e-12 74.3 84 58.3
RcHm_v2.0_Chr5g0033561 Rosa chinensis HOM05D002105 ORTHO05D001271 1.0e-11 73.6 64 64.1
FAN11G1959 Fragaria x ananassa HOM05D002105 ORTHO05D001271 2.9e-11 72.0 66 60.6
FAN16G0257 Fragaria x ananassa HOM05D002105 ORTHO05D001271 2.9e-11 72.0 66 60.6
FAN25G0802 Fragaria x ananassa HOM05D002105 ORTHO05D001271 2.9e-11 72.0 66 60.6
FvH4_3g19880 Fragaria vesca HOM05D002105 ORTHO05D001271 1.1e-10 70.1 66 59.1
FAN21G0480 Fragaria x ananassa HOM05D002105 ORTHO05D001271 1.1e-10 70.1 66 59.1
SGA_v2.0_scaffold73G24261 Striga asiatica HOM05D002105 ORTHO05D001271 1.1e-10 70.1 68 60.3
DCAR_019557 Daucus carota HOM05D002105 ORTHO05D001271 2.5e-10 68.9 94 50.0
Gohir.D05G354300 Gossypium hirsutum HOM05D002105 ORTHO05D001271 4.2e-10 68.2 90 48.9
SalBow7G4171 Salvia bowleyana HOM05D002105 ORTHO05D001271 4.2e-10 68.2 67 61.2
DCAR_020991 Daucus carota HOM05D002105 ORTHO05D001271 9.3e-10 67.0 78 61.5
Sabra16G0261900 Salix brachista HOM05D002105 ORTHO05D001271 1.2e-09 66.6 71 57.7
Potri.011G119700 Populus trichocarpa HOM05D002105 ORTHO05D001271 2.7e-09 65.5 53 64.2
QL08p022033 Quercus lobata HOM05D002105 ORTHO05D001271 2.7e-09 65.5 90 47.8
unitig_747.g21573 Utricularia gibba HOM05D002105 ORTHO05D001271 2.7e-09 65.5 92 50.0
SGA_v2.0_scaffold34G13814 Striga asiatica HOM05D002105 ORTHO05D001271 7.9e-09 63.9 65 60.0
Lj8A155G95 Lonicera japonica HOM05D002105 ORTHO05D001271 1.3e-08 63.2 66 53.0
TAR624G0863 Trochodendron aralioides HOM05D002105 ORTHO05D001271 1.3e-08 63.2 86 45.3
Oeu005407.1 Olea europaea HOM05D002105 ORTHO05D001271 2.3e-08 62.4 87 48.3
Sabra11G0104100 Salix brachista HOM05D002105 ORTHO05D001271 2.3e-08 62.4 56 60.7
Thecc.07G090000 Theobroma cacao HOM05D002105 ORTHO05D001271 3.0e-08 62.0 71 54.9
TWI38G1694 Tripterygium wilfordii HOM05D002105 ORTHO05D001271 3.0e-08 62.0 67 56.7
Aqoxy1G02397 Aquilegia oxysepala HOM05D002105 ORTHO05D001271 5.1e-08 61.2 65 52.3
Sed0026326 Sechium edule HOM05D002105 ORTHO05D001271 5.1e-08 61.2 44 70.5
Manes.15G087400 Manihot esculenta HOM05D002105 ORTHO05D001271 8.7e-08 60.5 65 56.9
CiPaw.11G170100 Carya illinoinensis HOM05D002105 ORTHO05D001271 1.1e-07 60.1 70 51.4
CiPaw.12G118700 Carya illinoinensis HOM05D002105 ORTHO05D001271 1.1e-07 60.1 72 50.0
PSO675G3374 Papaver somniferum HOM05D002105 ORTHO05D001271 1.1e-07 60.1 89 49.4
CANSAT56G3600 Cannabis sativa HOM05D002105 ORTHO05D001271 1.5e-07 59.7 56 55.4
Glyma.12G224800 Glycine max HOM05D002105 ORTHO05D001271 2.5e-07 58.9 70 52.9
Hma1.2p1_0531F.1_g173370 Hydrangea macrophylla HOM05D002105 ORTHO05D001271 2.5e-07 58.9 47 61.7
PSO541G4007 Papaver somniferum HOM05D002105 ORTHO05D001271 3.3e-07 58.5 89 49.4
PGR083G2752 Punica granatum HOM05D002105 ORTHO05D001271 3.3e-07 58.5 71 49.3
VMungo1080G0407 Vigna mungo HOM05D002105 ORTHO05D001271 3.3e-07 58.5 72 50.0
Manes.03G109600 Manihot esculenta HOM05D002105 ORTHO05D001271 4.3e-07 58.2 62 59.7
Sopen07g031290 Solanum pennellii HOM05D002105 ORTHO05D001271 4.3e-07 58.2 45 71.1
AL7G25270 Arabidopsis lyrata HOM05D002105 ORTHO05D001271 5.7e-07 57.8 82 48.8
Duzib170G0794 Durio zibethinus HOM05D002105 ORTHO05D001271 5.7e-07 57.8 40 65.0
CSS0000814 Camellia sinensis var. sinensis HOM05D002105 ORTHO05D001271 7.4e-07 57.4 43 62.8
Hma1.2p1_0898F.1_g234460 Hydrangea macrophylla HOM05D002105 ORTHO05D001271 1.6e-06 56.2 79 50.6
Potri.001G399400 Populus trichocarpa HOM05D002105 ORTHO05D001271 1.6e-06 56.2 45 62.2
Gorai.009G386100 Gossypium raimondii HOM05D002105 ORTHO05D001271 2.1e-06 55.8 73 46.6
Nitab4.5_0001241g0060 Nicotiana tabacum HOM05D002105 ORTHO05D001271 2.1e-06 55.8 93 51.6
PGSC0003DMG400012445 Solanum tuberosum HOM05D002105 ORTHO05D001271 2.1e-06 55.8 45 66.7
COL.COLO4_27176 Corchorus olitorius HOM05D002105 ORTHO05D001271 2.8e-06 55.5 38 63.2
Phvul.005G072500 Phaseolus vulgaris HOM05D002105 ORTHO05D001271 2.8e-06 55.5 66 45.5
TAR627G1018 Trochodendron aralioides HOM05D002105 ORTHO05D001271 3.7e-06 55.1 86 45.3
AT4G27500 Arabidopsis thaliana HOM05D002105 ORTHO05D001271 4.8e-06 54.7 54 53.7
Lj3g0009937 Lotus japonicus HOM05D002105 ORTHO05D001271 4.8e-06 54.7 71 46.5
Nitab4.5_0001336g0080 Nicotiana tabacum HOM05D002105 ORTHO05D001271 4.8e-06 54.7 88 50.0
TAR626G1709 Trochodendron aralioides HOM05D002105 ORTHO05D001271 4.8e-06 54.7 82 39.0
CARHR235180 Cardamine hirsuta HOM05D002105 ORTHO05D001271 6.2e-06 54.3 65 53.8
Cpa.g.sc80.68 Carica papaya HOM05D002105 ORTHO05D001271 6.2e-06 54.3 69 44.9
Carub.0007s1335 Capsella rubella HOM05D002105 ORTHO05D001271 8.2e-06 53.9 66 51.5
TWI39G0142 Tripterygium wilfordii HOM05D002105 ORTHO05D001271 8.2e-06 53.9 77 46.8


User provided reference genes

Program Settings