Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G0113 Salvia bowleyana HOM05D001170 ORTHO05D008741 4.5e-53 211.1 113 100.0
SalBow5G4502 Salvia bowleyana HOM05D001170 ORTHO05D008741 5.9e-21 104.4 72 80.6
MSTRG.18998 Avicennia marina HOM05D001170 ORTHO05D008741 3.0e-12 75.5 75 57.3
Sopen00g009970 Solanum pennellii HOM05D001170 ORTHO05D008741 7.3e-11 70.9 71 53.5
Sopen09g001520 Solanum pennellii HOM05D001170 ORTHO05D008741 7.3e-11 70.9 71 53.5
Solyc09g005620.4 Solanum lycopersicum HOM05D001170 ORTHO05D008741 1.2e-10 70.1 71 52.1
vmacro08884 Vaccinium macrocarpon HOM05D001170 ORTHO05D008741 1.2e-10 70.1 87 48.3
Peaxi162Scf00170g00120 Petunia axillaris HOM05D001170 ORTHO05D008741 2.1e-10 69.3 72 47.2
PGSC0003DMG400004454 Solanum tuberosum HOM05D001170 ORTHO05D008741 2.8e-10 68.9 71 52.1
Migut.L02023 Erythranthe guttata HOM05D001170 ORTHO05D008741 8.1e-10 67.4 67 55.2
Hma1.2p1_0362F.1_g136420 Hydrangea macrophylla HOM05D001170 ORTHO05D008741 8.1e-10 67.4 70 54.3
Oeu063396.1 Olea europaea HOM05D001170 ORTHO05D008741 1.4e-09 66.6 85 47.1
Cc06_g01160 Coffea canephora HOM05D001170 ORTHO05D008741 1.8e-09 66.2 88 39.8
Dinv09288 Davidia involucrata HOM05D001170 ORTHO05D008741 2.3e-09 65.9 72 52.8
HanXRQChr11g0331711 Helianthus annuus HOM05D001170 ORTHO05D008741 2.3e-09 65.9 87 43.7
unitig_26.g9085 Utricularia gibba HOM05D001170 ORTHO05D008741 2.3e-09 65.9 76 55.3
Nitab4.5_0000261g0040 Nicotiana tabacum HOM05D001170 ORTHO05D008741 4.0e-09 65.1 76 47.4
CSS0009561 Camellia sinensis var. sinensis HOM05D001170 ORTHO05D008741 5.2e-09 64.7 72 51.4
Lj2A72T46 Lonicera japonica HOM05D001170 ORTHO05D008741 6.8e-09 64.3 72 50.0
CAN.G133.10 Capsicum annuum HOM05D001170 ORTHO05D008741 8.9e-09 63.9 66 51.5
CANSAT35G0043 Cannabis sativa HOM05D001170 ORTHO05D008741 2.6e-08 62.4 71 49.3
EL10Ac5g12545 Beta vulgaris HOM05D001343 ORTHO05D002008 3.4e-08 62.0 62 43.5
Lsat_1_v5_gn_8_101640 Lactuca sativa HOM05D001170 ORTHO05D008741 3.4e-08 62.0 72 48.6
Psat7g244840 Pisum sativum HOM05D000073 ORTHO05D000033 7.5e-08 60.8 73 42.5
ECA236G0793 Erigeron canadensis HOM05D001170 ORTHO05D008741 1.7e-07 59.7 87 43.7
TAR623G1719 Trochodendron aralioides HOM05D001594 ORTHO05D002862 3.7e-07 58.5 74 45.9
AUR62030807 Chenopodium quinoa HOM05D001170 ORTHO05D008741 6.4e-07 57.8 62 40.3
AUR62030484 Chenopodium quinoa HOM05D001170 ORTHO05D008741 8.3e-07 57.4 62 40.3
Actinidia05360 Actinidia chinensis HOM05D001170 ORTHO05D008741 1.1e-06 57.0 78 43.6
FvH4_6g11240 Fragaria vesca HOM05D001170 ORTHO05D008741 1.1e-06 57.0 73 43.8
FAN14G2338 Fragaria x ananassa HOM05D001170 ORTHO05D008741 1.1e-06 57.0 73 43.8
FAN14G4496 Fragaria x ananassa HOM05D001170 ORTHO05D008741 1.1e-06 57.0 73 43.8
RcHm_v2.0_Chr3g0462751 Rosa chinensis HOM05D001170 ORTHO05D008741 1.1e-06 57.0 73 43.8
Sc01g0006910 Simmondsia chinensis HOM05D001170 ORTHO05D008741 1.4e-06 56.6 63 50.8
Nitab4.5_0013095g0010 Nicotiana tabacum HOM05D001170 ORTHO05D008741 1.9e-06 56.2 69 49.3
Nn2g10877 Nelumbo nucifera HOM05D001170 ORTHO05D008741 3.2e-06 55.5 64 43.8
Atru.chr8.2265 Acer truncatum HOM05D001170 ORTHO05D008741 4.1e-06 55.1 85 38.8
Ca_20220_v3 Cicer arietinum L. HOM05D000073 ORTHO05D000033 4.1e-06 55.1 66 39.4
FAN02G4623 Fragaria x ananassa HOM05D001170 ORTHO05D008741 4.1e-06 55.1 76 43.4
Prupe.6G279600 Prunus persica HOM05D001170 ORTHO05D008741 4.1e-06 55.1 73 43.8
FAN09G0318 Fragaria x ananassa HOM05D001170 ORTHO05D008741 5.4e-06 54.7 73 43.8
PSO384G1831 Papaver somniferum HOM05D001170 ORTHO05D008741 7.1e-06 54.3 79 39.2
Aqoxy4G02521 Aquilegia oxysepala HOM05D001170 ORTHO05D008741 9.2e-06 53.9 65 40.0


User provided reference genes

Program Settings