Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.2e-88 328.6 186 100.0
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 3.2e-88 328.6 186 100.0
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 2.1e-23 113.2 189 42.9
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 1.0e-22 110.9 196 48.5
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 1.0e-22 110.9 196 48.5
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 1.8e-22 110.2 188 46.3
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 5.2e-22 108.6 187 46.5
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 1.8e-19 100.1 149 46.3
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 2.5e-16 89.7 185 34.6
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 7.3e-16 88.2 188 38.8
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 4.0e-14 82.4 195 36.4
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 1.2e-13 80.9 192 34.9
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 3.4e-13 79.3 192 34.9
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 5.8e-13 78.6 192 35.9
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.7e-12 77.0 191 30.9
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 6.4e-12 75.1 195 37.9
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 6.4e-12 75.1 161 36.0
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 1.4e-11 73.9 192 32.8
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 3.2e-11 72.8 189 32.3
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 4.1e-11 72.4 187 29.9
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 4.1e-11 72.4 197 40.1
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 4.1e-11 72.4 189 33.3
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 4.1e-11 72.4 187 33.2
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 7.0e-11 71.6 198 30.3
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 2.0e-10 70.1 161 33.5
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 2.7e-10 69.7 190 32.6
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 4.6e-10 68.9 200 31.5
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 4.6e-10 68.9 190 30.5
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 6.0e-10 68.6 183 30.6
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 7.8e-10 68.2 145 35.2
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.7e-09 67.0 177 33.3
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 2.3e-09 66.6 175 33.7
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 3.9e-09 65.9 191 29.3
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 5.0e-09 65.5 199 29.1
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 8.6e-09 64.7 189 32.8
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.9e-08 63.5 187 29.4
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 2.5e-08 63.2 191 32.5
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 3.3e-08 62.8 196 31.1
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 4.3e-08 62.4 181 30.4
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 4.3e-08 62.4 191 32.5
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 4.3e-08 62.4 166 33.7
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 5.6e-08 62.0 187 29.9
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 5.6e-08 62.0 191 31.9
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 7.3e-08 61.6 201 29.9
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 9.5e-08 61.2 191 31.9
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 9.5e-08 61.2 192 33.9
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 1.2e-07 60.8 176 33.0
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.6e-07 60.5 184 33.2
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 2.1e-07 60.1 174 29.9
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 2.1e-07 60.1 183 30.1
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 2.1e-07 60.1 207 30.4
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 3.6e-07 59.3 207 30.0
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 4.7e-07 58.9 190 32.6
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 6.2e-07 58.5 189 32.3
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 6.2e-07 58.5 189 32.3
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 6.2e-07 58.5 188 27.1
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 6.2e-07 58.5 188 27.1
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 8.0e-07 58.2 153 32.0
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 1.1e-06 57.8 178 29.8
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.1e-06 57.8 188 27.1
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 1.4e-06 57.4 179 29.6
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 1.8e-06 57.0 184 28.8
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 2.3e-06 56.6 169 29.6
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 2.3e-06 56.6 177 28.8
Lalb_Chr11g0065671 Lupinus albus HOM05D007182 ORTHO05D008919 3.1e-06 56.2 193 29.0
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 6.8e-06 55.1 171 31.0
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 6.8e-06 55.1 141 30.5
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 6.8e-06 55.1 167 29.3
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 8.9e-06 54.7 158 30.4
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 8.9e-06 54.7 185 29.7


User provided reference genes

Program Settings