Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G6994 Salvia bowleyana HOM05D000751 ORTHO05D005618 0.0e+00 1335.5 718 100.0
SalBow6G2294 Salvia bowleyana HOM05D000751 ORTHO05D005618 0.0e+00 1177.2 688 94.6
SalBow6G0847 Salvia bowleyana HOM05D000751 ORTHO05D005618 3.3e-226 788.9 575 73.4
SalBow1G4534 Salvia bowleyana HOM05D000751 ORTHO05D005618 2.6e-223 779.2 546 75.3
MSTRG.26530 Avicennia marina HOM05D000751 ORTHO05D005618 2.6e-178 629.8 715 53.3
Migut.L01901 Erythranthe guttata HOM05D000751 ORTHO05D005618 1.7e-177 627.1 491 65.0
SGA_v2.0_scaffold595G53113 Striga asiatica HOM05D000751 ORTHO05D005618 1.8e-171 607.1 579 56.6
unitig_8.g3549 Utricularia gibba HOM05D000751 ORTHO05D005618 3.3e-149 533.1 645 46.7
Actinidia06357 Actinidia chinensis HOM05D000751 ORTHO05D005618 2.7e-143 513.5 702 44.2
CSS0048015 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D005618 8.7e-142 508.4 739 42.5
GSVIVG01010908001 Vitis vinifera HOM05D000751 ORTHO05D005618 2.8e-140 503.4 694 42.7
TAR636G3589 Trochodendron aralioides HOM05D000751 ORTHO05D005618 1.1e-139 501.5 746 40.9
Oeu047314.3 Olea europaea HOM05D000751 ORTHO05D005618 2.4e-139 500.4 712 44.0
Cc06_g22130 Coffea canephora HOM05D000751 ORTHO05D005618 4.0e-139 499.6 491 52.1
Cc06_g21130 Coffea canephora HOM05D000751 ORTHO05D005618 9.9e-138 495.0 620 45.2
Hma1.2p1_0207F.1_g087810 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.4e-136 491.1 682 43.3
Sopen07g005110 Solanum pennellii HOM05D000751 ORTHO05D005618 3.5e-135 486.5 540 48.1
Lsat_1_v5_gn_7_56501 Lactuca sativa HOM05D000751 ORTHO05D005618 1.0e-134 485.0 739 40.2
Nitab4.5_0000074g0030 Nicotiana tabacum HOM05D000751 ORTHO05D005618 1.0e-134 485.0 720 41.5
Cfa016755 Carpinus fangiana HOM05D000751 ORTHO05D005618 2.3e-134 483.8 702 41.3
Nn8g40996 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.5e-133 481.1 508 50.2
DCAR_007397 Daucus carota HOM05D000751 ORTHO05D005618 8.2e-132 475.3 645 45.1
Duzib168G1036 Durio zibethinus HOM05D000751 ORTHO05D005618 3.1e-131 473.4 704 41.6
CiPaw.14G110300 Carya illinoinensis HOM05D000751 ORTHO05D005618 4.0e-131 473.0 671 43.4
Gorai.009G003500 Gossypium raimondii HOM05D000751 ORTHO05D005618 2.0e-130 470.7 496 50.2
Peaxi162Scf00324g00731 Petunia axillaris HOM05D000751 ORTHO05D005618 2.0e-130 470.7 529 48.2
CANSAT11G2085 Cannabis sativa HOM05D000751 ORTHO05D005618 7.6e-130 468.8 576 44.8
Potri.003G010000 Populus trichocarpa HOM05D000751 ORTHO05D005618 1.0e-129 468.4 500 49.0
Thecc.09G180200 Theobroma cacao HOM05D000751 ORTHO05D005618 1.0e-129 468.4 702 41.7
Gohir.D05G003900 Gossypium hirsutum HOM05D000751 ORTHO05D005618 1.3e-129 468.0 493 50.3
Gohir.A05G003500 Gossypium hirsutum HOM05D000751 ORTHO05D005618 2.2e-129 467.2 532 47.9
EL10Ac2g02594 Beta vulgaris HOM05D000751 ORTHO05D005618 3.8e-129 466.5 568 46.8
MELO3C017440.2 Cucumis melo HOM05D000751 ORTHO05D005618 4.9e-129 466.1 542 46.9
EL10As14g24084 Beta vulgaris HOM05D000751 ORTHO05D005618 6.5e-129 465.7 569 46.6
ECA240G3678 Erigeron canadensis HOM05D000751 ORTHO05D005618 1.9e-128 464.2 667 44.5
Sed0012322 Sechium edule HOM05D000751 ORTHO05D005618 4.2e-128 463.0 491 48.7
Ciclev10030781m.g Citrus clementina HOM05D000751 ORTHO05D005618 9.3e-128 461.8 692 41.8
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 1.2e-127 461.5 656 45.0
Cpa.g.sc86.27 Carica papaya HOM05D000751 ORTHO05D005618 1.6e-127 461.1 562 46.3
Hund24686 Selenicereus undatus HOM05D000751 ORTHO05D005618 1.6e-127 461.1 583 45.5
CsaV3_1G031770 Cucumis sativus L. HOM05D000751 ORTHO05D005618 2.1e-127 460.7 514 48.1
Manes.17G002500 Manihot esculenta HOM05D000751 ORTHO05D005618 2.1e-127 460.7 557 45.6
Nitab4.5_0008918g0010 Nicotiana tabacum HOM05D000751 ORTHO05D005618 2.7e-127 460.3 509 47.3
Eucgr.A01411 Eucalyptus grandis HOM05D000751 ORTHO05D005618 1.8e-126 457.6 751 40.5
Prupe.1G079600 Prunus persica HOM05D000751 ORTHO05D005618 6.7e-126 455.7 722 41.3
A08p30790 Brassica napus HOM05D000751 ORTHO05D005618 2.5e-125 453.8 776 40.1
AL1G30040 Arabidopsis lyrata HOM05D000751 ORTHO05D005618 3.3e-125 453.4 710 43.2
THA.LOC104813512 Tarenaya hassleriana HOM05D000751 ORTHO05D005618 3.3e-125 453.4 498 49.6
TWI38G2172 Tripterygium wilfordii HOM05D000751 ORTHO05D005618 4.3e-125 453.0 594 44.1
RcHm_v2.0_Chr4g0400251 Rosa chinensis HOM05D000751 ORTHO05D005618 9.7e-125 451.8 537 45.6
Aa31LG7G2520 Aethionema arabicum HOM05D000751 ORTHO05D005618 2.2e-124 450.7 497 49.5
CARHR018290 Cardamine hirsuta HOM05D000751 ORTHO05D005618 4.8e-124 449.5 494 48.2
BraA08t35010Z Brassica rapa HOM05D000751 ORTHO05D005618 3.1e-123 446.8 571 44.5
Thhalv10006892m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 4.1e-123 446.4 499 47.9
Aqoxy2G02196 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 5.3e-123 446.0 711 39.1
PSO478G0715 Papaver somniferum HOM05D000751 ORTHO05D005618 6.9e-123 445.7 531 45.0
PSO017G1776 Papaver somniferum HOM05D000751 ORTHO05D005618 9.0e-123 445.3 531 45.4
Sp4g05240 Schrenkiella parvula HOM05D000751 ORTHO05D005618 9.0e-123 445.3 501 47.9
AT1G17690 Arabidopsis thaliana HOM05D000751 ORTHO05D005618 1.2e-122 444.9 715 43.5
Carub.0001s1742 Capsella rubella HOM05D000751 ORTHO05D005618 2.0e-122 444.1 721 42.7
BolC8t49447H Brassica oleracea HOM05D000751 ORTHO05D005618 2.6e-122 443.7 781 41.2
C08p18130 Brassica napus HOM05D000751 ORTHO05D005618 7.6e-122 442.2 786 39.9
FvH4_4g07640 Fragaria vesca HOM05D000751 ORTHO05D005618 1.1e-120 438.3 539 44.5
Glyma.09G057700 Glycine max HOM05D000751 ORTHO05D005618 5.1e-118 429.5 611 41.7
Sc06g0007900 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.9e-117 427.6 465 48.4
VMungo1309G0231 Vigna mungo HOM05D000751 ORTHO05D005618 9.7e-117 425.2 607 43.5
Lj6g0015551 Lotus japonicus HOM05D000751 ORTHO05D005618 2.2e-116 424.1 529 45.7
TPR.G9024 Trifolium pratense HOM05D000751 ORTHO05D005618 1.4e-115 421.4 530 45.1
Atru.chr11.2504 Acer truncatum HOM05D000751 ORTHO05D005618 2.6e-114 417.2 689 42.2
HanXRQChr03g0068331 Helianthus annuus HOM05D000751 ORTHO05D005618 2.6e-114 417.2 526 44.1
Phvul.009G238100 Phaseolus vulgaris HOM05D000751 ORTHO05D005618 1.3e-113 414.8 619 42.0
ATR0626G151 Amborella trichopoda HOM05D000751 ORTHO05D005618 1.7e-113 414.5 597 40.4
AUR62014975 Chenopodium quinoa HOM05D000751 ORTHO05D005618 6.5e-113 412.5 562 43.4
Medtr2g036890 Medicago truncatula HOM05D000751 ORTHO05D005618 6.5e-113 412.5 503 45.1
CDE06G1960 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 8.5e-113 412.1 440 47.5
DCAR_007396 Daucus carota HOM05D000751 ORTHO05D005618 8.5e-113 412.1 538 45.2
Medtr2g012650 Medicago truncatula HOM05D000751 ORTHO05D005618 1.1e-112 411.8 492 45.9
Rhsim01G0197100 Rhododendron simsii HOM05D000751 ORTHO05D005618 1.4e-112 411.4 505 45.3
Lalb_Chr02g0148081 Lupinus albus HOM05D000751 ORTHO05D005618 1.9e-112 411.0 619 40.7
Thhalv10023137m.g Eutrema salsugineum HOM05D000751 ORTHO05D005618 9.4e-112 408.7 548 43.6
FAN07G1720 Fragaria x ananassa HOM05D000751 ORTHO05D005618 4.7e-111 406.4 538 42.8
ClCG06G013510 Citrullus lanatus HOM05D000751 ORTHO05D005618 6.9e-107 392.5 669 36.3
MD03G1036400 Malus domestica HOM05D000751 ORTHO05D005618 7.2e-104 382.5 596 40.8
arahy.Tifrunner.gnm1.ann1.QPM7FK Arachis hypogaea HOM05D000751 ORTHO05D005618 2.7e-103 380.6 492 44.3
FAN17G2112 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.3e-102 377.5 462 43.9
vmacro08789 Vaccinium macrocarpon HOM05D000751 ORTHO05D005618 2.6e-101 374.0 1010 30.9
Carub.0003s1065 Capsella rubella HOM05D000751 ORTHO05D005618 8.2e-100 369.0 555 41.3
CAN.G193.38 Capsicum annuum HOM05D000751 ORTHO05D005618 2.6e-98 364.0 356 53.4
Os05g0295100 Oryza sativa ssp. japonica HOM05D000751 ORTHO05D005618 1.5e-96 358.2 545 40.7
Zm00001eb406370 Zea mays HOM05D000751 ORTHO05D005618 3.2e-96 357.1 613 37.8
Glyma.15G163800 Glycine max HOM05D000751 ORTHO05D005618 1.8e-94 351.3 424 48.3
FAN12G3496 Fragaria x ananassa HOM05D000751 ORTHO05D005618 2.6e-93 347.4 537 38.7
arahy.Tifrunner.gnm1.ann1.4Y102Q Arachis hypogaea HOM05D000751 ORTHO05D005618 1.1e-88 332.0 505 40.0
Dinv26447 Davidia involucrata HOM05D000751 ORTHO05D005618 4.4e-85 320.1 478 45.8
Aqoxy1G02673 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 9.8e-85 318.9 568 36.8
AUR62030665 Chenopodium quinoa HOM05D000751 ORTHO05D005618 4.1e-83 313.5 325 50.2
Hma1.2p1_0909F.1_g235820 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.7e-81 308.1 340 50.9
AagrBONN_evm.TU.Sc2ySwM_369.592 Anthoceros agrestis HOM05D000751 ORTHO05D005618 3.3e-80 303.9 518 34.9
Mapoly0074s0025 Marchantia polymorpha HOM05D000751 ORTHO05D005618 1.8e-78 298.1 532 34.4
Cc10_g11360 Coffea canephora HOM05D000751 ORTHO05D005618 1.2e-77 295.4 762 32.5
Pp3c10_17670 Physcomitrium patens HOM05D000751 ORTHO05D005618 6.3e-76 289.7 544 34.6
CDE02G3188 Ceratophyllum demersum HOM05D000751 ORTHO05D005618 1.1e-75 288.9 323 47.1
SMO296G0020 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 6.6e-73 279.6 533 34.7
Aqoxy2G02322 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 8.6e-73 279.3 569 36.0
HPP92_028564 Vanilla planifolia HOM05D000751 ORTHO05D005618 1.9e-72 278.1 357 43.1
BcaB05g23995 Brassica carinata HOM05D000751 ORTHO05D005618 8.0e-71 272.7 492 36.8
CAN.G266.4 Capsicum annuum HOM05D000751 ORTHO05D005618 1.3e-65 255.4 337 42.4
BolC2t08163H Brassica oleracea HOM05D000751 ORTHO05D005618 9.5e-64 249.2 377 41.1
Ca_05496_v3 Cicer arietinum L. HOM05D000751 ORTHO05D005618 1.8e-62 245.0 258 48.4
Psat4g182200 Pisum sativum HOM05D000751 ORTHO05D005618 1.5e-61 241.9 281 48.4
MD13G1251200 Malus domestica HOM05D000751 ORTHO05D005618 1.9e-59 235.0 337 42.7
COL.COLO4_25458 Corchorus olitorius HOM05D000751 ORTHO05D005618 2.3e-57 228.0 539 33.6
CBR_g38171 Chara braunii HOM05D000751 ORTHO05D005618 5.0e-57 226.9 577 31.9
SMO174G0270 Selaginella moellendorffii HOM05D000751 ORTHO05D005618 7.3e-56 223.0 377 36.9
Solyc07g009350.4 Solanum lycopersicum HOM05D000751 ORTHO05D005618 4.3e-48 197.2 177 54.8
AUR62024882 Chenopodium quinoa HOM05D000751 ORTHO05D005618 4.7e-47 193.7 227 44.9
Psat4g047120 Pisum sativum HOM05D000751 ORTHO05D005618 8.4e-44 183.0 190 52.1
Cre04.g218300 Chlamydomonas reinhardtii HOM05D000751 ORTHO05D005618 2.1e-42 178.3 341 34.0
Haze_19748 Corylus avellana HOM05D000751 ORTHO05D005618 4.6e-42 177.2 370 34.3
SEGI_01043 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.9e-41 174.1 200 47.5
MCO16G456 Micromonas commoda HOM05D000751 ORTHO05D005618 5.1e-41 173.7 423 29.8
Medtr4g415340 Medicago truncatula HOM05D000751 ORTHO05D005618 5.6e-40 170.2 249 39.0
CAN.G266.3 Capsicum annuum HOM05D000751 ORTHO05D005618 3.1e-38 164.5 207 44.0
Cfa022413 Carpinus fangiana HOM05D000751 ORTHO05D005618 1.7e-36 158.7 495 28.7
BcaC03g14585 Brassica carinata HOM05D000751 ORTHO05D005618 3.8e-36 157.5 238 42.9
SEGI_35111 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 1.9e-35 155.2 253 36.4
Medtr8g466500 Medicago truncatula HOM05D000751 ORTHO05D005618 8.1e-31 139.8 195 42.1
Nn2g10858 Nelumbo nucifera HOM05D000751 ORTHO05D005618 1.2e-29 136.0 180 45.0
MD13G1251100 Malus domestica HOM05D000751 ORTHO05D005618 1.0e-25 122.9 166 38.0
PRCOL_00003641 Prasinoderma coloniale HOM05D000751 ORTHO05D005618 1.2e-21 109.4 453 23.8
Hma1.2p1_2432F.1_g322060 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 2.1e-18 98.6 85 52.9
Sc06g0007910 Simmondsia chinensis HOM05D000751 ORTHO05D005618 1.8e-17 95.5 283 29.7
Aqoxy2G02180 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 5.1e-17 94.0 106 45.3
Sabra15G0073700 Salix brachista HOM05D000810 ORTHO05D005618 1.1e-14 86.3 198 29.3
Aqoxy125s004 Aquilegia oxysepala HOM05D000751 ORTHO05D005618 9.0e-14 83.2 104 44.2
HPP92_003076 Vanilla planifolia HOM05D000751 ORTHO05D005618 9.0e-14 83.2 117 38.5
Hma1.2p1_2432F.1_g322050 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.2e-13 82.8 161 34.2
Hma1.2p1_2432F.1_g322070 Hydrangea macrophylla HOM05D000751 ORTHO05D005618 1.5e-13 82.4 97 50.5
Medtr8g466490 Medicago truncatula HOM05D000751 ORTHO05D005618 3.8e-12 77.8 169 31.4
HPP92_003077 Vanilla planifolia HOM05D000751 ORTHO05D005618 6.0e-10 70.5 82 43.9
SEGI_01614 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.9e-09 67.8 124 36.3
Cc06_g21120 Coffea canephora HOM05D000751 ORTHO05D005618 8.7e-09 66.6 48 62.5
SEGI_01124 Sequoiadendron giganteum HOM05D000751 ORTHO05D005618 3.3e-08 64.7 81 42.0
arahy.Tifrunner.gnm1.ann1.EK4LKE Arachis hypogaea HOM05D000751 ORTHO05D005618 1.8e-06 58.9 82 39.0


User provided reference genes

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