Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G6978 Salvia bowleyana HOM05D007077 ORTHO05D008853 8.8e-59 229.9 106 100.0
Migut.K00414 Erythranthe guttata HOM05D007077 ORTHO05D008853 6.8e-43 177.2 103 75.7
MSTRG.10653 Avicennia marina HOM05D007077 ORTHO05D008853 8.3e-41 170.2 103 71.8
SGA_v2.0_scaffold51G18726 Striga asiatica HOM05D007077 ORTHO05D008853 2.0e-39 165.6 98 71.4
Oeu055966.1 Olea europaea HOM05D007077 ORTHO05D008853 7.8e-39 163.7 100 71.0
TAR636G1135 Trochodendron aralioides HOM05D007077 ORTHO05D008853 1.0e-30 136.7 109 56.9
CAN.G307.7 Capsicum annuum HOM05D007077 ORTHO05D008853 2.5e-29 132.1 95 57.9
Actinidia07437 Actinidia chinensis HOM05D007077 ORTHO05D008853 4.3e-29 131.3 103 56.3
MBI04_g10421_MAGBIO Magnolia biondii HOM05D007077 ORTHO05D008853 9.5e-29 130.2 106 53.8
vmacro06174 Vaccinium macrocarpon HOM05D007077 ORTHO05D008853 1.6e-28 129.4 103 55.3
Dinv36561 Davidia involucrata HOM05D007077 ORTHO05D008853 3.6e-28 128.3 102 54.9
Nitab4.5_0000167g0170 Nicotiana tabacum HOM05D007077 ORTHO05D008853 6.2e-28 127.5 95 58.9
Peaxi162Scf01013g00228 Petunia axillaris HOM05D007077 ORTHO05D008853 6.2e-28 127.5 95 57.9
Rhsim03G0246400 Rhododendron simsii HOM05D007077 ORTHO05D008853 6.2e-28 127.5 103 53.4
Carub.0002s2191 Capsella rubella HOM05D007077 ORTHO05D008853 4.0e-27 124.8 98 57.1
CiPaw.03G240800 Carya illinoinensis HOM05D007077 ORTHO05D008853 5.2e-27 124.4 102 56.9
Thecc.09G122000 Theobroma cacao HOM05D007077 ORTHO05D008853 6.8e-27 124.0 106 50.9
GSVIVG01035379001 Vitis vinifera HOM05D007077 ORTHO05D008853 6.8e-27 124.0 106 53.8
Prupe.7G238900 Prunus persica HOM05D007077 ORTHO05D008853 8.9e-27 123.6 102 52.9
Solyc03g025690.4 Solanum lycopersicum HOM05D007077 ORTHO05D008853 1.2e-26 123.2 95 54.7
Sopen03g004510 Solanum pennellii HOM05D007077 ORTHO05D008853 1.2e-26 123.2 95 54.7
TWI63G0911 Tripterygium wilfordii HOM05D007077 ORTHO05D008853 1.5e-26 122.9 102 53.9
BcaB02g06994 Brassica carinata HOM05D007077 ORTHO05D008853 2.0e-26 122.5 100 52.0
C06p32830 Brassica napus HOM05D007077 ORTHO05D008853 2.0e-26 122.5 100 52.0
Thhalv10019349m.g Eutrema salsugineum HOM05D007077 ORTHO05D008853 2.0e-26 122.5 98 51.0
BolC6t38404H Brassica oleracea HOM05D007077 ORTHO05D008853 2.6e-26 122.1 100 52.0
CSS0046716 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 2.6e-26 122.1 103 53.4
arahy.Tifrunner.gnm1.ann1.7ZPA8Y Arachis hypogaea HOM05D007077 ORTHO05D008853 3.4e-26 121.7 102 54.9
arahy.Tifrunner.gnm1.ann1.BTXG8Q Arachis hypogaea HOM05D007077 ORTHO05D008853 3.4e-26 121.7 102 54.9
A07p29070 Brassica napus HOM05D007077 ORTHO05D008853 3.4e-26 121.7 100 51.0
Eucgr.C04175 Eucalyptus grandis HOM05D007077 ORTHO05D008853 3.4e-26 121.7 102 49.0
QL02p087620 Quercus lobata HOM05D007077 ORTHO05D008853 3.4e-26 121.7 102 52.9
Potri.003G137900 Populus trichocarpa HOM05D007077 ORTHO05D008853 4.4e-26 121.3 102 52.0
AL2G35020 Arabidopsis lyrata HOM05D007077 ORTHO05D008853 5.8e-26 120.9 98 55.1
Manes.06G053400 Manihot esculenta HOM05D007077 ORTHO05D008853 5.8e-26 120.9 102 54.9
AT1G75125 Arabidopsis thaliana HOM05D007077 ORTHO05D008853 7.5e-26 120.6 98 55.1
COL.COLO4_35188 Corchorus olitorius HOM05D007077 ORTHO05D008853 1.3e-25 119.8 100 53.0
Sp5g30250 Schrenkiella parvula HOM05D007077 ORTHO05D008853 1.3e-25 119.8 98 51.0
Atru.chr7.1226 Acer truncatum HOM05D007077 ORTHO05D008853 2.2e-25 119.0 102 50.0
Gorai.009G019800 Gossypium raimondii HOM05D007077 ORTHO05D008853 2.2e-25 119.0 106 51.9
COL.COLO4_05999 Corchorus olitorius HOM05D007077 ORTHO05D008853 4.9e-25 117.9 107 53.3
Phvul.003G161700 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 4.9e-25 117.9 102 52.9
FvH4_1g03790 Fragaria vesca HOM05D007077 ORTHO05D008853 6.4e-25 117.5 102 51.0
FAN19G1922 Fragaria x ananassa HOM05D007077 ORTHO05D008853 6.4e-25 117.5 102 51.0
Glyma.05G009400 Glycine max HOM05D007077 ORTHO05D008853 6.4e-25 117.5 99 52.5
Gohir.A05G018500 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.4e-25 117.5 106 50.9
Gohir.D05G019400 Gossypium hirsutum HOM05D007077 ORTHO05D008853 6.4e-25 117.5 106 51.9
FAN23G2971 Fragaria x ananassa HOM05D007077 ORTHO05D008853 8.3e-25 117.1 102 51.0
FAN26G2340 Fragaria x ananassa HOM05D007077 ORTHO05D008853 8.3e-25 117.1 102 51.0
Sabra03G0099300 Salix brachista HOM05D007077 ORTHO05D008853 8.3e-25 117.1 102 50.0
BcaB02g07008 Brassica carinata HOM05D007077 ORTHO05D008853 1.1e-24 116.7 101 48.5
CARHR068450 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.1e-24 116.7 102 52.0
Duzib168G0686 Durio zibethinus HOM05D007077 ORTHO05D008853 1.1e-24 116.7 106 49.1
CARHR068440 Cardamine hirsuta HOM05D007077 ORTHO05D008853 1.9e-24 115.9 98 53.1
Ah.05g167190 Amaranthus hybridus HOM05D007077 ORTHO05D008853 2.4e-24 115.5 97 51.5
Glyma.17G117400 Glycine max HOM05D007077 ORTHO05D008853 2.4e-24 115.5 99 51.5
MD02G1036500 Malus domestica HOM05D007077 ORTHO05D008853 3.2e-24 115.2 98 53.1
Os01g0612800 Oryza sativa ssp. japonica HOM05D007077 ORTHO05D008853 3.2e-24 115.2 95 53.7
Cc09_g03400 Coffea canephora HOM05D007077 ORTHO05D008853 4.1e-24 114.8 62 71.0
Phvul.003G162000 Phaseolus vulgaris HOM05D007077 ORTHO05D008853 5.4e-24 114.4 99 51.5
Pp3c10_2110 Physcomitrium patens HOM05D007077 ORTHO05D008853 7.0e-24 114.0 99 50.5
VMungo1215G0506 Vigna mungo HOM05D007077 ORTHO05D008853 7.0e-24 114.0 99 53.5
Psat4g041880 Pisum sativum HOM05D007077 ORTHO05D008853 9.2e-24 113.6 102 49.0
RcHm_v2.0_Chr2g0089201 Rosa chinensis HOM05D007077 ORTHO05D008853 9.2e-24 113.6 102 50.0
Aa31LG4G5320 Aethionema arabicum HOM05D007077 ORTHO05D008853 1.2e-23 113.2 97 50.5
Duzib150G1251 Durio zibethinus HOM05D007077 ORTHO05D008853 1.6e-23 112.8 102 50.0
Lalb_Chr07g0178761 Lupinus albus HOM05D007077 ORTHO05D008853 1.6e-23 112.8 91 50.5
BcaB05g24885 Brassica carinata HOM05D007077 ORTHO05D008853 3.5e-23 111.7 100 48.0
THA.LOC104826537 Tarenaya hassleriana HOM05D007077 ORTHO05D008853 3.5e-23 111.7 102 47.1
Sed0015086 Sechium edule HOM05D007077 ORTHO05D008853 4.6e-23 111.3 102 49.0
TPR.G10683 Trifolium pratense HOM05D007077 ORTHO05D008853 6.0e-23 110.9 90 52.2
Actinidia26405 Actinidia chinensis HOM05D007077 ORTHO05D008853 1.0e-22 110.2 66 66.7
PGR102G1835 Punica granatum HOM05D007077 ORTHO05D008853 1.3e-22 109.8 66 65.2
Lj4g0023379 Lotus japonicus HOM05D007077 ORTHO05D008853 1.7e-22 109.4 94 51.1
Medtr4g113750 Medicago truncatula HOM05D007077 ORTHO05D008853 1.7e-22 109.4 93 52.7
BraA07t30546Z Brassica rapa HOM05D007077 ORTHO05D008853 2.3e-22 109.0 100 47.0
AagrBONN_evm.TU.Sc2ySwM_368.923 Anthoceros agrestis HOM05D007077 ORTHO05D008853 3.0e-22 108.6 102 46.1
CDE06G0710 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 3.0e-22 108.6 105 46.7
CSS0033721 Camellia sinensis var. sinensis HOM05D007077 ORTHO05D008853 3.9e-22 108.2 86 53.5
Cpa.g.sc75.76 Carica papaya HOM05D007077 ORTHO05D008853 3.9e-22 108.2 91 52.7
Hma1.2p1_0665F.1_g199210 Hydrangea macrophylla HOM05D007077 ORTHO05D008853 3.9e-22 108.2 61 67.2
Mapoly0015s0040 Marchantia polymorpha HOM05D007077 ORTHO05D008853 3.3e-21 105.1 105 46.7
BcaC03g15541 Brassica carinata HOM05D007077 ORTHO05D008853 2.1e-20 102.4 97 48.5
BolC2t09261H Brassica oleracea HOM05D007077 ORTHO05D008853 2.1e-20 102.4 97 48.5
PGSC0003DMG400014298 Solanum tuberosum HOM05D007077 ORTHO05D008853 3.6e-20 101.7 82 51.2
Hund09149 Selenicereus undatus HOM05D007077 ORTHO05D008853 6.2e-20 100.9 97 45.4
A02p19700 Brassica napus HOM05D007077 ORTHO05D008853 1.8e-19 99.4 103 44.7
BraA02t07006Z Brassica rapa HOM05D007077 ORTHO05D008853 1.8e-19 99.4 103 44.7
CsaV3_2G002680 Cucumis sativus L. HOM05D007077 ORTHO05D008853 4.0e-19 98.2 102 46.1
Lsat_1_v5_gn_5_98981 Lactuca sativa HOM05D007077 ORTHO05D008853 4.0e-19 98.2 97 45.4
CDE07G1647 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 5.2e-19 97.8 66 60.6
HanXRQChr01g0017151 Helianthus annuus HOM05D007077 ORTHO05D008853 5.2e-19 97.8 107 43.9
Haze_25634 Corylus avellana HOM05D007077 ORTHO05D008853 6.8e-19 97.4 96 50.0
CDE07G0486 Ceratophyllum demersum HOM05D007077 ORTHO05D008853 1.5e-18 96.3 66 59.1
Ciclev10010021m.g Citrus clementina HOM05D007077 ORTHO05D008853 4.4e-18 94.7 82 48.8
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 5.8e-18 94.4 89 47.2
Manes.14G129700 Manihot esculenta HOM05D007077 ORTHO05D008853 7.5e-18 94.0 89 52.8
Nitab4.5_0001579g0110 Nicotiana tabacum HOM05D007077 ORTHO05D008853 1.3e-17 93.2 103 42.7
QL02p031889 Quercus lobata HOM05D007077 ORTHO05D008853 2.2e-17 92.4 100 44.0
QL93p2004_0148 Quercus lobata HOM05D007077 ORTHO05D008853 2.2e-17 92.4 100 44.0
Sed0025696 Sechium edule HOM05D007077 ORTHO05D008853 3.7e-17 91.7 84 48.8
EL10Ac8g18603 Beta vulgaris HOM05D007077 ORTHO05D008853 6.4e-17 90.9 88 44.3
SMO137G0334 Selaginella moellendorffii HOM05D007077 ORTHO05D008853 6.4e-17 90.9 93 43.0
HanXRQChr12g0356451 Helianthus annuus HOM05D007077 ORTHO05D008853 1.1e-16 90.1 111 40.5
ClCG11G002840 Citrullus lanatus HOM05D007077 ORTHO05D008853 4.6e-15 84.7 121 38.8
GSVIVG01015495001 Vitis vinifera HOM05D007077 ORTHO05D008853 6.0e-15 84.3 47 68.1
MCO14G029 Micromonas commoda HOM05D007077 ORTHO05D008853 2.5e-13 79.0 102 40.2
C02p32320 Brassica napus HOM05D007077 ORTHO05D008853 8.1e-12 73.9 44 63.6
CBR_g10839 Chara braunii HOM05D001161 ORTHO05D000497 5.4e-08 61.2 97 34.0
MELO3C031577.2 Cucumis melo HOM05D007077 ORTHO05D008853 1.6e-07 59.7 89 37.1


User provided reference genes

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