Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 2.2e-137 492.3 248 100.0
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 1.4e-86 323.6 248 68.1
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 1.4e-83 313.5 251 65.7
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 1.3e-73 280.4 247 59.9
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 1.7e-73 280.0 234 62.4
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 1.7e-73 280.0 234 62.4
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 8.1e-71 271.2 237 59.5
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 4.0e-70 268.9 239 57.3
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 4.0e-70 268.9 247 57.9
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 2.0e-69 266.5 247 57.9
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 2.9e-68 262.7 247 57.5
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 4.9e-68 261.9 243 56.8
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 6.4e-68 261.5 247 55.9
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 6.4e-68 261.5 245 57.1
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 6.4e-68 261.5 243 56.8
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 8.3e-68 261.2 247 57.5
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.1e-67 260.8 248 54.8
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 4.1e-67 258.8 248 54.4
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 7.1e-67 258.1 243 55.1
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.1e-66 256.5 247 55.9
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 3.5e-66 255.8 247 56.7
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 6.0e-66 255.0 248 53.6
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 6.0e-66 255.0 245 56.7
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 6.0e-66 255.0 238 55.5
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 6.0e-66 255.0 221 57.5
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 1.0e-65 254.2 229 57.2
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.3e-65 253.8 248 54.0
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 2.3e-65 253.1 239 55.6
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 3.9e-65 252.3 245 55.5
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 3.9e-65 252.3 248 53.2
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 3.9e-65 252.3 248 55.2
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 8.6e-65 251.1 234 54.7
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 1.5e-64 250.4 247 54.3
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 1.9e-64 250.0 239 53.1
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 1.9e-64 250.0 239 57.3
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 2.5e-64 249.6 232 55.6
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 3.3e-64 249.2 239 52.3
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 3.3e-64 249.2 247 54.3
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 4.3e-64 248.8 239 53.1
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 5.6e-64 248.4 239 52.7
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 1.2e-63 247.3 233 54.9
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 1.6e-63 246.9 228 54.4
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 3.6e-63 245.7 239 53.1
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 6.2e-63 245.0 239 51.5
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 6.2e-63 245.0 245 53.9
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 8.1e-63 244.6 247 53.8
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 1.1e-62 244.2 232 53.4
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 4.0e-62 242.3 231 55.0
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 4.0e-62 242.3 242 54.1
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 5.2e-62 241.9 230 55.2
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 5.2e-62 241.9 230 55.2
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 5.2e-62 241.9 248 53.6
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 6.8e-62 241.5 230 54.8
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 6.8e-62 241.5 233 54.1
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 1.2e-61 240.7 250 50.0
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 2.0e-61 240.0 224 55.8
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 2.0e-61 240.0 229 53.7
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 2.6e-61 239.6 250 49.6
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 4.4e-61 238.8 244 50.4
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 9.9e-61 237.7 232 52.2
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 2.2e-60 236.5 223 54.7
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 2.2e-60 236.5 234 53.0
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 4.9e-60 235.3 225 54.7
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 4.9e-60 235.3 229 55.5
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 1.1e-59 234.2 256 48.0
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 2.4e-59 233.0 245 50.6
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 5.4e-59 231.9 236 51.7
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 3.5e-58 229.2 239 49.4
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 4.6e-58 228.8 237 51.1
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 6.0e-58 228.4 227 52.9
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 2.3e-57 226.5 234 47.4
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 3.3e-56 222.6 204 57.8
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 4.3e-56 222.2 222 56.8
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 7.3e-56 221.5 225 52.0
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 2.1e-55 219.9 240 47.9
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 2.1e-55 219.9 245 49.8
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 4.7e-55 218.8 240 47.5
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 6.2e-55 218.4 241 46.5
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 2.9e-52 209.5 222 50.9
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 2.9e-52 209.5 243 46.9
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 3.8e-52 209.1 241 46.9
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 8.4e-52 208.0 239 48.1
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 8.4e-52 208.0 136 73.5
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 2.4e-51 206.5 213 54.0
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 6.6e-49 198.4 214 50.0
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 1.5e-48 197.2 216 49.5
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 1.5e-48 197.2 230 47.4
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 8.1e-47 191.4 135 65.9
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 4.5e-45 185.7 134 64.2
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 2.9e-44 183.0 176 54.0
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 7.1e-43 178.3 133 65.4
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 7.9e-42 174.9 215 47.4
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 5.1e-41 172.2 212 48.6
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 1.3e-39 167.5 244 40.6
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 6.9e-38 161.8 219 41.1
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 2.2e-36 156.8 223 40.8
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 4.9e-36 155.6 185 45.4
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 7.4e-32 141.7 194 42.3
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 3.7e-31 139.4 149 53.0
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 5.3e-30 135.6 211 37.9
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 4.9e-28 129.0 218 37.2
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 8.7e-25 118.2 91 59.3
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.1e-24 117.9 81 66.7
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 9.7e-24 114.8 97 54.6
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.6e-21 106.7 124 50.8
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 1.2e-18 97.8 88 47.7
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 7.9e-18 95.1 92 47.8
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 9.4e-11 71.6 87 41.4
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 7.9e-10 68.6 58 48.3
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 5.7e-08 62.4 61 47.5


User provided reference genes

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