Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G6606 Salvia bowleyana HOM05D006694 ORTHO05D008240 3.6e-141 506.1 526 100.0
SalBow6G6418 Salvia bowleyana HOM05D006694 ORTHO05D008240 5.6e-102 375.9 468 84.6
SalBow5G3658 Salvia bowleyana HOM05D006694 ORTHO05D008240 6.2e-101 372.5 477 96.6
SalBow5G5172 Salvia bowleyana HOM05D006694 ORTHO05D008240 5.2e-100 369.4 477 96.4
Migut.D00664 Erythranthe guttata HOM05D006694 ORTHO05D008240 3.6e-56 223.8 192 62.5
SGA_v2.0_scaffold29G12231 Striga asiatica HOM05D006694 ORTHO05D008240 3.2e-49 200.7 530 61.7
MSTRG.18464 Avicennia marina HOM05D006694 ORTHO05D008240 1.4e-36 158.7 193 47.7
Oeu043278.1 Olea europaea HOM05D006694 ORTHO05D008240 5.9e-35 153.3 191 45.5
Sopen07g032820 Solanum pennellii HOM05D006694 ORTHO05D008240 1.5e-30 138.7 175 46.3
PGSC0003DMG400022317 Solanum tuberosum HOM05D006694 ORTHO05D008240 4.4e-30 137.1 175 45.7
Solyc07g064625.1 Solanum lycopersicum HOM05D006694 ORTHO05D008240 5.7e-30 136.7 175 45.1
Nitab4.5_0003488g0040 Nicotiana tabacum HOM05D006694 ORTHO05D008240 4.8e-29 133.7 173 42.2
CAN.G337.135 Capsicum annuum HOM05D006694 ORTHO05D008240 1.4e-28 132.1 174 44.3
CiPaw.14G112300 Carya illinoinensis HOM05D006694 ORTHO05D008240 5.4e-28 130.2 145 44.8
Hma1.2p1_1099F.1_g256830 Hydrangea macrophylla HOM05D006694 ORTHO05D008240 7.0e-28 129.8 165 42.4
CSS0033907 Camellia sinensis var. sinensis HOM05D006694 ORTHO05D008240 2.9e-26 124.4 187 37.4
PGR031G0070 Punica granatum HOM05D006694 ORTHO05D008240 1.9e-25 121.7 148 44.6
QL01p017030 Quercus lobata HOM05D006694 ORTHO05D008240 1.2e-24 119.0 141 42.6
Haze_23236 Corylus avellana HOM05D006694 ORTHO05D008240 1.6e-24 118.6 141 44.7
Nitab4.5_0001500g0030 Nicotiana tabacum HOM05D006694 ORTHO05D008240 3.6e-24 117.5 148 40.5
TAR633G1767 Trochodendron aralioides HOM05D006694 ORTHO05D008240 4.7e-24 117.1 145 40.0
MD08G1215500 Malus domestica HOM05D006694 ORTHO05D008240 8.0e-24 116.3 145 42.1
Nitab4.5_0000730g0020 Nicotiana tabacum HOM05D006694 ORTHO05D008240 8.0e-24 116.3 148 39.9
Aqoxy1G00470 Aquilegia oxysepala HOM05D006694 ORTHO05D008240 1.4e-23 115.5 145 40.0
Hund21974 Selenicereus undatus HOM05D006179 ORTHO05D008240 4.0e-23 114.0 149 41.6
AUR62006546 Chenopodium quinoa HOM05D006694 ORTHO05D008240 3.4e-22 110.9 188 34.6
Haze_23854 Corylus avellana HOM05D006694 ORTHO05D008240 5.7e-22 110.2 136 44.1
Sc16g0011010 Simmondsia chinensis HOM05D006694 ORTHO05D008240 3.1e-20 104.4 140 36.4
Nn7g35871 Nelumbo nucifera HOM05D006694 ORTHO05D008240 4.1e-20 104.0 147 34.0
FAN21G3540 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.7e-19 101.3 150 36.0
FAN25G2919 Fragaria x ananassa HOM05D006694 ORTHO05D008240 2.7e-19 101.3 145 36.6
Lalb_Chr10g0096081 Lupinus albus HOM05D006694 ORTHO05D008240 2.7e-19 101.3 145 38.6
FvH4_3g35120 Fragaria vesca HOM05D006694 ORTHO05D008240 3.5e-19 100.9 145 36.6
FAN11G2736 Fragaria x ananassa HOM05D006694 ORTHO05D008240 3.5e-19 100.9 145 36.6
Thhalv10006947m.g Eutrema salsugineum HOM05D006694 ORTHO05D008240 4.5e-19 100.5 178 36.5
Aa31LG6G11690 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.8e-19 99.8 165 37.6
Aa31LG6G5330 Aethionema arabicum HOM05D006694 ORTHO05D008240 7.8e-19 99.8 165 37.6
TWI79G1258 Tripterygium wilfordii HOM05D006694 ORTHO05D008240 5.0e-18 97.1 184 32.1
Cfa011326 Carpinus fangiana HOM05D006694 ORTHO05D008240 1.5e-17 95.5 172 34.9
MELO3C015109.2 Cucumis melo HOM05D006694 ORTHO05D008240 1.5e-17 95.5 169 33.7
ClCG03G012530 Citrullus lanatus HOM05D006694 ORTHO05D008240 1.9e-17 95.1 170 32.4
BolC5t29875H Brassica oleracea HOM05D006694 ORTHO05D008240 2.5e-17 94.7 168 35.7
AL7G24620 Arabidopsis lyrata HOM05D006694 ORTHO05D008240 3.3e-17 94.4 130 41.5
C05p11260 Brassica napus HOM05D006694 ORTHO05D008240 3.3e-17 94.4 168 35.7
LjContig00485g0019324 Lotus japonicus HOM05D006694 ORTHO05D008240 3.3e-17 94.4 145 39.3
CsaV3_1G043500 Cucumis sativus L. HOM05D006694 ORTHO05D008240 4.3e-17 94.0 169 32.5
FAN08G0107 Fragaria x ananassa HOM05D006694 ORTHO05D008240 5.6e-17 93.6 153 34.0
THA.LOC104800448 Tarenaya hassleriana HOM05D006694 ORTHO05D008240 5.6e-17 93.6 144 39.6
Aa31LG5G8930 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.6e-16 92.0 143 37.8
Aa31LG5G9000 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.6e-16 92.0 154 39.0
BraA06t24145Z Brassica rapa HOM05D006694 ORTHO05D008240 1.6e-16 92.0 168 34.5
CARHR235710 Cardamine hirsuta HOM05D006694 ORTHO05D008240 1.6e-16 92.0 121 43.8
RcHm_v2.0_Chr5g0048941 Rosa chinensis HOM05D006694 ORTHO05D008240 2.1e-16 91.7 161 33.5
Aa31LG2G18100 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.8e-16 91.3 165 37.0
Nitab4.5_0000718g0300 Nicotiana tabacum HOM05D006694 ORTHO05D008240 2.8e-16 91.3 86 51.2
Ah.06g194610 Amaranthus hybridus HOM05D006694 ORTHO05D008240 3.6e-16 90.9 112 39.3
Sed0016136 Sechium edule HOM05D006694 ORTHO05D008240 3.6e-16 90.9 176 30.7
Aa31LG6G11680 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.1e-16 90.1 142 33.8
Aa31LG6G5340 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.1e-16 90.1 142 33.8
Sp1g10540 Schrenkiella parvula HOM05D006694 ORTHO05D008240 6.1e-16 90.1 114 42.1
Aa31LG8G12540 Aethionema arabicum HOM05D006694 ORTHO05D008240 8.0e-16 89.7 163 36.8
HanXRQChr14g0447481 Helianthus annuus HOM05D006694 ORTHO05D008240 8.0e-16 89.7 141 32.6
A06p09550 Brassica napus HOM05D006694 ORTHO05D008240 1.0e-15 89.4 168 33.9
FAN18G4320 Fragaria x ananassa HOM05D006694 ORTHO05D008240 1.4e-15 89.0 153 32.7
FvH4_5g33200 Fragaria vesca HOM05D006694 ORTHO05D008240 1.8e-15 88.6 148 33.1
Aa31sc233G30 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.8e-15 86.7 165 35.8
Aa31sc233G40 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.8e-15 86.7 165 36.4
Aa31sc233G60 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.8e-15 86.7 165 36.4
Aa31sc233G50 Aethionema arabicum HOM05D006694 ORTHO05D008240 1.2e-14 85.9 158 35.4
EL10Ac4g10114 Beta vulgaris HOM05D006694 ORTHO05D008240 3.4e-14 84.3 94 45.7
Ca_20213_v3 Cicer arietinum L. HOM05D006694 ORTHO05D008240 1.7e-13 82.0 144 35.4
Glyma.07G147400 Glycine max HOM05D006694 ORTHO05D008240 1.7e-13 82.0 133 36.1
LjContig00485g0005104 Lotus japonicus HOM05D006694 ORTHO05D008240 2.2e-13 81.6 135 36.3
Aa31LG2G18070 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.9e-13 81.3 165 35.8
Aa31LG2G18090 Aethionema arabicum HOM05D006694 ORTHO05D008240 2.9e-13 81.3 165 35.8
Psat3g130440 Pisum sativum HOM05D006694 ORTHO05D008240 2.9e-13 81.3 113 39.8
Aa31LG10G10300 Aethionema arabicum HOM05D006694 ORTHO05D008240 6.4e-13 80.1 128 37.5
AT4G28010 Arabidopsis thaliana HOM05D006694 ORTHO05D008240 1.8e-12 78.6 147 33.3
Lj1g0001110 Lotus japonicus HOM05D006694 ORTHO05D010126 3.2e-12 77.8 137 37.2
Prupe.1G547200 Prunus persica HOM05D006694 ORTHO05D008240 5.4e-12 77.0 83 44.6
Ca_07624_v3 Cicer arietinum L. HOM05D000278 ORTHO05D008240 9.2e-12 76.3 146 33.6
MBI04_g37009_MAGBIO Magnolia biondii HOM05D006694 ORTHO05D008240 1.2e-11 75.9 128 34.4
Medtr7g067460 Medicago truncatula HOM05D006694 ORTHO05D008240 1.2e-11 75.9 111 36.0
Phvul.008G105900 Phaseolus vulgaris HOM05D006694 ORTHO05D008240 1.6e-11 75.5 163 31.3
ATR0681G086 Amborella trichopoda HOM05D006694 ORTHO05D008240 6.0e-11 73.6 128 34.4
ATR0697G204 Amborella trichopoda HOM05D006694 ORTHO05D008240 1.7e-10 72.0 149 32.2
DCAR_024407 Daucus carota HOM05D006694 ORTHO05D008240 1.7e-10 72.0 91 37.4
ATR0737G153 Amborella trichopoda HOM05D006694 ORTHO05D008240 5.0e-10 70.5 142 32.4
TPR.G8137 Trifolium pratense HOM05D006694 ORTHO05D008240 8.6e-10 69.7 128 32.8
vmacro13799 Vaccinium macrocarpon HOM05D000162 ORTHO05D000090 1.1e-09 69.3 186 28.5
VMungo1383G3557 Vigna mungo HOM05D006694 ORTHO05D008240 1.1e-09 69.3 142 31.0
MD15G1400000 Malus domestica HOM05D006694 ORTHO05D008240 1.5e-09 68.9 83 42.2
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 1.5e-09 68.9 107 31.8
ECA238G0309 Erigeron canadensis HOM05D006295 ORTHO05D008061 1.9e-09 68.6 82 37.8
Cfa009864 Carpinus fangiana HOM05D006694 ORTHO05D008240 2.5e-09 68.2 140 31.4
ATR1128G092 Amborella trichopoda HOM05D006694 ORTHO05D008240 9.5e-09 66.2 117 35.0
Carub.0007s1279 Capsella rubella HOM05D006694 ORTHO05D008240 2.1e-08 65.1 115 34.8
CSS0028376 Camellia sinensis var. sinensis HOM05D007358 ORTHO05D009117 2.8e-08 64.7 87 33.3
ATR0737G136 Amborella trichopoda HOM05D006694 ORTHO05D008240 4.7e-08 63.9 103 32.0
Dinv06480 Davidia involucrata HOM05D000162 ORTHO05D000090 8.0e-08 63.2 131 32.1
Nn1g02624 Nelumbo nucifera HOM05D000162 ORTHO05D000090 8.0e-08 63.2 130 28.5
Eucgr.G03208 Eucalyptus grandis HOM05D006694 ORTHO05D008240 2.3e-07 61.6 82 39.0
THA.LOC104804370 Tarenaya hassleriana HOM05D006858 ORTHO05D008767 4.0e-07 60.8 91 33.0
THA.LOC104823283 Tarenaya hassleriana HOM05D007172 ORTHO05D009267 4.0e-07 60.8 70 35.7
PSO170G2530 Papaver somniferum HOM05D008994 ORTHO05D010954 5.2e-07 60.5 88 37.5
AUR62011921 Chenopodium quinoa HOM05D000162 ORTHO05D000090 1.2e-06 59.3 129 24.8
Glyma.19G190667 Glycine max HOM05D007410 ORTHO05D009500 1.2e-06 59.3 71 35.2
Lsat_1_v5_gn_9_9621 Lactuca sativa HOM05D000162 ORTHO05D000090 1.2e-06 59.3 127 26.8
SHI20606 Sapria himalayana HOM05D006819 ORTHO05D008763 1.2e-06 59.3 85 35.3
TAR624G0084 Trochodendron aralioides HOM05D000029 ORTHO05D001395 1.2e-06 59.3 101 33.7
Eucgr.A00799 Eucalyptus grandis HOM05D000162 ORTHO05D000090 2.0e-06 58.5 151 24.5
Manes.09G016633 Manihot esculenta HOM05D000162 ORTHO05D000090 2.6e-06 58.2 135 29.6
CANSAT25G3187 Cannabis sativa HOM05D006858 ORTHO05D008767 3.4e-06 57.8 87 32.2
Rhsim13G0208900 Rhododendron simsii HOM05D006694 ORTHO05D008240 3.4e-06 57.8 88 31.8
Zm00001eb191870 Zea mays HOM05D011046 ORTHO05D013342 3.4e-06 57.8 107 29.0
EL10Ac5g10449 Beta vulgaris HOM05D000162 ORTHO05D000090 4.4e-06 57.4 151 24.5
Sabra15G0048500 Salix brachista HOM05D003975 ORTHO05D009762 4.4e-06 57.4 110 33.6
Eucgr.A00743 Eucalyptus grandis HOM05D000162 ORTHO05D000090 5.8e-06 57.0 138 25.4
Sabra09G0052500 Salix brachista HOM05D006694 ORTHO05D008240 5.8e-06 57.0 72 38.9
A09p62690 Brassica napus HOM05D000162 ORTHO05D000090 7.5e-06 56.6 120 26.7
Haze_01905 Corylus avellana HOM05D006858 ORTHO05D008767 7.5e-06 56.6 75 33.3
Nitab4.5_0000428g0430 Nicotiana tabacum HOM05D000162 ORTHO05D000090 7.5e-06 56.6 131 30.5
Potri.009G069600 Populus trichocarpa HOM05D006694 ORTHO05D008240 7.5e-06 56.6 109 27.5
THA.LOC104809084 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 7.5e-06 56.6 141 24.8
BraA04t17002Z Brassica rapa HOM05D007358 ORTHO05D009117 9.8e-06 56.2 86 36.0
Migut.G01188 Erythranthe guttata HOM05D000162 ORTHO05D000090 9.8e-06 56.2 137 29.9
FvH4_5g32150 Fragaria vesca HOM05D003900 ORTHO05D005009 9.8e-06 56.2 101 26.7
Gohir.D02G212500 Gossypium hirsutum HOM05D006858 ORTHO05D008767 9.8e-06 56.2 92 25.0
HanXRQChr11g0341941 Helianthus annuus HOM05D000162 ORTHO05D000090 9.8e-06 56.2 165 26.1
SalBow3G0344 Salvia bowleyana HOM05D000162 ORTHO05D000090 9.8e-06 56.2 120 28.3


User provided reference genes

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