Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.7e-36 155.6 83 100.0
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 9.1e-19 96.7 55 100.0
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.7e-15 84.3 56 82.1
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.7e-12 75.9 56 71.4
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 2.2e-12 75.5 56 75.0
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 1.8e-11 72.4 56 71.4
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 4.1e-11 71.2 56 71.4
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 5.4e-11 70.9 56 66.1
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 7.0e-11 70.5 56 67.9
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 9.1e-11 70.1 56 64.3
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 1.6e-10 69.3 56 64.3
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 7.7e-10 67.0 56 66.1
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 7.7e-10 67.0 56 66.1
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 7.7e-10 67.0 56 58.9
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 1.0e-09 66.6 56 66.1
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 2.2e-09 65.5 56 58.9
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 2.2e-09 65.5 56 57.1
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 2.9e-09 65.1 56 62.5
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 2.9e-09 65.1 56 62.5
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 3.8e-09 64.7 56 60.7
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 3.8e-09 64.7 56 62.5
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 3.8e-09 64.7 67 56.7
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 3.8e-09 64.7 56 58.9
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 5.0e-09 64.3 56 62.5
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 5.0e-09 64.3 56 62.5
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 5.0e-09 64.3 56 60.7
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 5.0e-09 64.3 56 62.5
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 6.5e-09 63.9 56 62.5
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 6.5e-09 63.9 56 62.5
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 1.1e-08 63.2 56 62.5
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.1e-08 63.2 56 62.5
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 1.1e-08 63.2 56 62.5
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 1.5e-08 62.8 56 58.9
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 1.5e-08 62.8 56 60.7
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 1.9e-08 62.4 56 58.9
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 1.9e-08 62.4 56 60.7
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.9e-08 62.4 56 60.7
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.9e-08 62.4 56 60.7
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 2.5e-08 62.0 56 58.9
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 2.5e-08 62.0 56 58.9
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 2.5e-08 62.0 56 60.7
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 4.2e-08 61.2 56 62.5
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 4.2e-08 61.2 56 58.9
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 4.2e-08 61.2 56 58.9
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 5.5e-08 60.8 56 60.7
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 5.5e-08 60.8 56 60.7
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 5.5e-08 60.8 56 57.1
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 5.5e-08 60.8 56 57.1
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 7.2e-08 60.5 79 41.8
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 7.2e-08 60.5 56 58.9
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 7.2e-08 60.5 56 58.9
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 7.2e-08 60.5 56 58.9
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 9.4e-08 60.1 79 41.8
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 9.4e-08 60.1 56 53.6
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 9.4e-08 60.1 56 60.7
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 9.4e-08 60.1 56 58.9
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 9.4e-08 60.1 56 58.9
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 1.2e-07 59.7 56 58.9
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 1.2e-07 59.7 56 58.9
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 1.2e-07 59.7 56 53.6
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 1.2e-07 59.7 56 58.9
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 1.6e-07 59.3 56 51.8
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 1.6e-07 59.3 79 40.5
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 1.6e-07 59.3 56 57.1
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 1.6e-07 59.3 56 51.8
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 2.1e-07 58.9 56 58.9
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 2.1e-07 58.9 56 58.9
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 2.1e-07 58.9 56 58.9
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.1e-07 58.9 56 58.9
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 2.1e-07 58.9 56 58.9
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 2.1e-07 58.9 56 58.9
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 2.7e-07 58.5 56 57.1
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 2.7e-07 58.5 56 55.4
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 2.7e-07 58.5 56 53.6
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 6.1e-07 57.4 56 50.0
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 6.1e-07 57.4 56 57.1
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 6.1e-07 57.4 56 57.1
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 8.0e-07 57.0 56 53.6
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 8.0e-07 57.0 56 57.1
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 8.0e-07 57.0 56 57.1
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 1.0e-06 56.6 56 51.8
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 1.0e-06 56.6 56 57.1
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 1.0e-06 56.6 56 57.1
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 1.4e-06 56.2 56 51.8
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 1.8e-06 55.8 59 52.5
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 2.3e-06 55.5 56 55.4
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.0e-06 55.1 56 57.1
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 4.0e-06 54.7 76 40.8
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 4.0e-06 54.7 56 51.8
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 5.2e-06 54.3 79 38.0
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 5.2e-06 54.3 79 38.0
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 5.2e-06 54.3 56 53.6
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 5.2e-06 54.3 66 45.5
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 5.2e-06 54.3 56 48.2
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 6.8e-06 53.9 79 38.0
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 6.8e-06 53.9 79 38.0
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 6.8e-06 53.9 56 55.4
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 6.8e-06 53.9 56 55.4


User provided reference genes

Program Settings