Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G6462 Salvia bowleyana HOM05D000676 ORTHO05D023114 1.6e-48 195.7 94 100.0
SalBow6G3470 Salvia bowleyana HOM05D008887 ORTHO05D023114 2.6e-38 161.8 78 100.0
SalBow6G6184 Salvia bowleyana HOM05D000676 ORTHO05D001458 3.5e-35 151.4 76 93.4
SalBow6G3553 Salvia bowleyana HOM05D000676 ORTHO05D001458 4.8e-32 141.0 75 88.0
SalBow6G1249 Salvia bowleyana HOM05D000676 ORTHO05D023114 4.0e-31 137.9 90 76.7
SalBow3G0199 Salvia bowleyana HOM05D000676 ORTHO05D001458 9.6e-25 116.7 78 73.1
Peaxi162Scf00152g00049 Petunia axillaris HOM05D000676 ORTHO05D001458 2.7e-11 72.0 70 51.4
Peaxi162Scf00152g00410 Petunia axillaris HOM05D000676 ORTHO05D001458 2.7e-11 72.0 70 51.4
Peaxi162Scf00152g00434 Petunia axillaris HOM05D000676 ORTHO05D001458 2.7e-11 72.0 76 47.4
Peaxi162Scf01714g00003 Petunia axillaris HOM05D000676 ORTHO05D001458 2.7e-11 72.0 70 51.4
SalBow3G1914 Salvia bowleyana HOM05D000676 ORTHO05D001458 4.6e-11 71.2 74 48.6
Migut.N01138 Erythranthe guttata HOM05D000676 ORTHO05D001458 7.9e-11 70.5 64 51.6
Nitab4.5_0004634g0020 Nicotiana tabacum HOM05D000676 ORTHO05D001458 1.0e-10 70.1 70 48.6
Solyc05g051260.3 Solanum lycopersicum HOM05D000676 ORTHO05D001458 1.4e-10 69.7 70 45.7
Sopen05g029640 Solanum pennellii HOM05D000676 ORTHO05D001458 3.0e-10 68.6 70 45.7
Lalb_Chr03g0024991 Lupinus albus HOM05D000676 ORTHO05D001458 6.7e-10 67.4 70 45.7
RcHm_v2.0_Chr6g0252841 Rosa chinensis HOM05D000676 ORTHO05D001458 6.7e-10 67.4 77 45.5
FvH4_3g40060 Fragaria vesca HOM05D000676 ORTHO05D001458 1.5e-09 66.2 72 43.1
FAN11G1014 Fragaria x ananassa HOM05D000676 ORTHO05D001458 1.5e-09 66.2 72 43.1
FAN16G3471 Fragaria x ananassa HOM05D000676 ORTHO05D001458 1.5e-09 66.2 72 43.1
Sopen01g049270 Solanum pennellii HOM05D000676 ORTHO05D001458 1.5e-09 66.2 70 47.1
PGSC0003DMG400014606 Solanum tuberosum HOM05D000676 ORTHO05D001458 1.5e-09 66.2 70 44.3
Solyc01g106990.2 Solanum lycopersicum HOM05D000676 ORTHO05D001458 2.0e-09 65.9 70 47.1
SalBow6G2898 Salvia bowleyana HOM05D000676 ORTHO05D023114 5.7e-09 64.3 34 91.2
Medtr5g049180 Medicago truncatula HOM05D000676 ORTHO05D001458 7.4e-09 63.9 70 45.7
Dinv06991 Davidia involucrata HOM05D000676 ORTHO05D001458 9.7e-09 63.5 70 42.9
FAN25G0623 Fragaria x ananassa HOM05D000676 ORTHO05D001458 9.7e-09 63.5 72 41.7
Lsat_1_v5_gn_9_112760 Lactuca sativa HOM05D000676 ORTHO05D001458 1.7e-08 62.8 60 45.0
SalBow6G5160 Salvia bowleyana HOM05D000676 ORTHO05D023114 1.7e-08 62.8 31 93.5
Psat6g214800 Pisum sativum HOM05D000676 ORTHO05D001458 2.2e-08 62.4 76 43.4
CSS0033079 Camellia sinensis var. sinensis HOM05D000676 ORTHO05D001458 2.8e-08 62.0 66 45.5
ECA240G0439 Erigeron canadensis HOM05D000676 ORTHO05D001458 2.8e-08 62.0 59 45.8
Glyma.11G105200 Glycine max HOM05D000676 ORTHO05D001458 3.7e-08 61.6 71 46.5
Lsat_1_v5_gn_9_90101 Lactuca sativa HOM05D000676 ORTHO05D001458 3.7e-08 61.6 63 42.9
Prupe.8G145100 Prunus persica HOM05D000676 ORTHO05D001458 4.8e-08 61.2 73 42.5
CSS0011804 Camellia sinensis var. sinensis HOM05D000676 ORTHO05D001458 6.3e-08 60.8 66 45.5
CSS0027413 Camellia sinensis var. sinensis HOM05D000676 ORTHO05D001458 6.3e-08 60.8 66 45.5
Migut.N01131 Erythranthe guttata HOM05D000676 ORTHO05D001458 6.3e-08 60.8 64 43.8
FAN15G3068 Fragaria x ananassa HOM05D000676 ORTHO05D001458 6.3e-08 60.8 60 48.3
Lalb_Chr01g0001661 Lupinus albus HOM05D000676 ORTHO05D001458 6.3e-08 60.8 68 45.6
RcHm_v2.0_Chr5g0072221 Rosa chinensis HOM05D000676 ORTHO05D020022 8.2e-08 60.5 72 40.3
Ca_05184_v3 Cicer arietinum L. HOM05D000676 ORTHO05D001458 1.1e-07 60.1 70 45.7
Nitab4.5_0004679g0100 Nicotiana tabacum HOM05D000676 ORTHO05D001458 1.8e-07 59.3 88 39.8
PSO541G6343 Papaver somniferum HOM05D000676 ORTHO05D001458 2.4e-07 58.9 89 39.3
PSO675G8392 Papaver somniferum HOM05D000676 ORTHO05D001458 2.4e-07 58.9 89 38.2
TPR.G27106 Trifolium pratense HOM05D000676 ORTHO05D001458 3.1e-07 58.5 61 45.9
Migut.N01135 Erythranthe guttata HOM05D000676 ORTHO05D001458 4.1e-07 58.2 50 56.0
Thecc.02G117400 Theobroma cacao HOM05D000676 ORTHO05D001458 4.1e-07 58.2 73 42.5
Atru.chr5.2344 Acer truncatum HOM05D000676 ORTHO05D001458 5.3e-07 57.8 70 40.0
FvH4_2g03840 Fragaria vesca HOM05D000676 ORTHO05D001458 5.3e-07 57.8 70 38.6
FAN15G3372 Fragaria x ananassa HOM05D000676 ORTHO05D001458 5.3e-07 57.8 70 38.6
FAN20G2236 Fragaria x ananassa HOM05D000676 ORTHO05D001458 5.3e-07 57.8 70 38.6
FAN24G2922 Fragaria x ananassa HOM05D000676 ORTHO05D001458 5.3e-07 57.8 70 38.6
Actinidia00369 Actinidia chinensis HOM05D000676 ORTHO05D001458 9.1e-07 57.0 75 40.0
FvH4_2g03792 Fragaria vesca HOM05D000676 ORTHO05D001458 9.1e-07 57.0 69 42.0
Lj3g0006550 Lotus japonicus HOM05D000676 ORTHO05D001458 9.1e-07 57.0 76 40.8
vmacro01959 Vaccinium macrocarpon HOM05D000676 ORTHO05D001458 9.1e-07 57.0 68 44.1
Migut.N01137 Erythranthe guttata HOM05D000676 ORTHO05D001458 1.2e-06 56.6 56 50.0
FAN24G1404 Fragaria x ananassa HOM05D000676 ORTHO05D001458 1.2e-06 56.6 54 48.1
C03p86380 Brassica napus HOM05D000676 ORTHO05D001458 1.5e-06 56.2 58 46.6
BolC3t20929H Brassica oleracea HOM05D000676 ORTHO05D001458 1.5e-06 56.2 58 46.6
Duzib132G0626 Durio zibethinus HOM05D000676 ORTHO05D001458 2.0e-06 55.8 75 36.0
Gohir.D12G019800 Gossypium hirsutum HOM05D000676 ORTHO05D001458 2.0e-06 55.8 62 38.7
Medtr1g106910 Medicago truncatula HOM05D000676 ORTHO05D001458 2.0e-06 55.8 63 42.9
Peaxi162Scf00016g02931 Petunia axillaris HOM05D000676 ORTHO05D001458 2.0e-06 55.8 65 44.6
Potri.009G087900 Populus trichocarpa HOM05D000676 ORTHO05D001458 2.0e-06 55.8 66 42.4
Sc08g0004440 Simmondsia chinensis HOM05D000676 ORTHO05D001458 2.0e-06 55.8 68 38.2
Zm00001eb400780 Zea mays HOM05D000676 ORTHO05D001458 2.0e-06 55.8 84 35.7
EL10Ac9g22199 Beta vulgaris HOM05D000676 ORTHO05D001458 2.6e-06 55.5 76 40.8
FvH4_2g03793 Fragaria vesca HOM05D000676 ORTHO05D001458 2.6e-06 55.5 54 46.3
FAN20G0167 Fragaria x ananassa HOM05D000676 ORTHO05D001458 2.6e-06 55.5 69 40.6
Gorai.008G020100 Gossypium raimondii HOM05D000676 ORTHO05D001458 2.6e-06 55.5 62 38.7
Prupe.8G145300 Prunus persica HOM05D000676 ORTHO05D001458 2.6e-06 55.5 64 45.3
Zm00001eb400770 Zea mays HOM05D000676 ORTHO05D001458 2.6e-06 55.5 66 39.4
QL11p030440 Quercus lobata HOM05D000676 ORTHO05D001458 3.4e-06 55.1 74 40.5
Sed0012129 Sechium edule HOM05D000676 ORTHO05D001458 3.4e-06 55.1 55 47.3
AUR62027008 Chenopodium quinoa HOM05D000676 ORTHO05D001458 4.5e-06 54.7 61 44.3
Ciclev10028089m.g Citrus clementina HOM05D000676 ORTHO05D001458 4.5e-06 54.7 69 43.5
Ciclev10030382m.g Citrus clementina HOM05D000676 ORTHO05D001458 4.5e-06 54.7 70 40.0
Glyma.11G105100 Glycine max HOM05D000676 ORTHO05D001458 4.5e-06 54.7 63 44.4
Peaxi162Scf01350g00130 Petunia axillaris HOM05D000676 ORTHO05D001458 4.5e-06 54.7 85 36.5
TPR.G2683 Trifolium pratense HOM05D000676 ORTHO05D001458 4.5e-06 54.7 63 42.9
Aqoxy2G02595 Aquilegia oxysepala HOM05D000676 ORTHO05D001458 5.9e-06 54.3 74 37.8
CAN.G606.62 Capsicum annuum HOM05D000676 ORTHO05D001458 5.9e-06 54.3 57 42.1
MELO3C018522.2 Cucumis melo HOM05D000676 ORTHO05D001458 5.9e-06 54.3 72 41.7
Lalb_Chr06g0165101 Lupinus albus HOM05D000676 ORTHO05D001458 5.9e-06 54.3 73 39.7
Phvul.011G033100 Phaseolus vulgaris HOM05D000676 ORTHO05D001458 5.9e-06 54.3 63 42.9
Lalb_Chr19g0139261 Lupinus albus HOM05D000676 ORTHO05D001458 7.7e-06 53.9 63 41.3
Medtr1g106790 Medicago truncatula HOM05D000676 ORTHO05D001458 7.7e-06 53.9 75 38.7
Psat2g093880 Pisum sativum HOM05D000676 ORTHO05D001458 7.7e-06 53.9 70 40.0
TWI59G1178 Tripterygium wilfordii HOM05D000676 ORTHO05D001458 7.7e-06 53.9 66 36.4


User provided reference genes

Program Settings