Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G6449 Salvia bowleyana HOM05D004817 ORTHO05D005790 2.5e-36 154.8 73 100.0
Dinv24730 Davidia involucrata HOM05D004817 ORTHO05D005790 2.7e-27 124.8 72 83.3
Migut.J01631 Erythranthe guttata HOM05D004817 ORTHO05D005790 4.9e-24 114.0 71 80.3
Eucgr.B02200 Eucalyptus grandis HOM05D004817 ORTHO05D005790 8.3e-24 113.2 73 75.3
Phvul.003G124400 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 1.4e-23 112.5 72 69.4
Manes.03G213500 Manihot esculenta HOM05D004817 ORTHO05D005790 3.1e-23 111.3 72 75.0
TAR362G1300 Trochodendron aralioides HOM05D004817 ORTHO05D005790 3.1e-23 111.3 74 73.0
COL.COLO4_25048 Corchorus olitorius HOM05D004817 ORTHO05D005790 7.0e-23 110.2 73 74.0
Phvul.009G221600 Phaseolus vulgaris HOM05D004817 ORTHO05D005790 1.2e-22 109.4 72 69.4
Potri.010G004000 Populus trichocarpa HOM05D004817 ORTHO05D005790 1.2e-22 109.4 74 73.0
Lalb_Chr12g0200501 Lupinus albus HOM05D004817 ORTHO05D005790 2.7e-22 108.2 73 67.1
Hund12264 Selenicereus undatus HOM05D004817 ORTHO05D005790 2.7e-22 108.2 72 70.8
QL06p014718 Quercus lobata HOM05D004817 ORTHO05D005790 4.5e-22 107.5 72 69.4
Glyma.17G042600 Glycine max HOM05D004817 ORTHO05D005790 5.9e-22 107.1 73 68.5
Nn4g25286 Nelumbo nucifera HOM05D004817 ORTHO05D005790 5.9e-22 107.1 71 77.5
Cfa015752 Carpinus fangiana HOM05D004817 ORTHO05D005790 7.7e-22 106.7 75 72.0
Glyma.15G185200 Glycine max HOM05D004817 ORTHO05D005790 7.7e-22 106.7 74 68.9
GSVIVG01017708001 Vitis vinifera HOM05D004817 ORTHO05D005790 7.7e-22 106.7 73 76.7
Eucgr.H04140 Eucalyptus grandis HOM05D004817 ORTHO05D005790 1.0e-21 106.3 69 73.9
EL10Ac3g06222 Beta vulgaris HOM05D004817 ORTHO05D005790 1.7e-21 105.5 74 70.3
Gohir.A01G036400 Gossypium hirsutum HOM05D004817 ORTHO05D005790 1.7e-21 105.5 70 74.3
Gohir.D01G023700 Gossypium hirsutum HOM05D004817 ORTHO05D005790 1.7e-21 105.5 70 74.3
Gorai.002G032200 Gossypium raimondii HOM05D004817 ORTHO05D005790 1.7e-21 105.5 70 74.3
TPR.G29237 Trifolium pratense HOM05D004817 ORTHO05D005790 1.7e-21 105.5 72 66.7
Psat1g016600 Pisum sativum HOM05D004817 ORTHO05D005790 2.3e-21 105.1 72 65.3
CiPaw.01G127200 Carya illinoinensis HOM05D004817 ORTHO05D005790 2.9e-21 104.8 73 69.9
Glyma.13G117300 Glycine max HOM05D004817 ORTHO05D005790 2.9e-21 104.8 74 66.2
Duzib151G1168 Durio zibethinus HOM05D004817 ORTHO05D005790 3.8e-21 104.4 70 70.0
Glyma.09G077700 Glycine max HOM05D004817 ORTHO05D005790 3.8e-21 104.4 73 67.1
PGR004G2302 Punica granatum HOM05D004817 ORTHO05D005790 3.8e-21 104.4 81 66.7
Sabra10G0003400 Salix brachista HOM05D004817 ORTHO05D005790 5.0e-21 104.0 75 70.7
Aqoxy2G02458 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 6.6e-21 103.6 75 70.7
Prupe.1G208000 Prunus persica HOM05D004817 ORTHO05D005790 6.6e-21 103.6 73 68.5
Ca_02320_v3 Cicer arietinum L. HOM05D004817 ORTHO05D005790 1.1e-20 102.8 73 68.5
Lj2g0017510 Lotus japonicus HOM05D004817 ORTHO05D005790 1.1e-20 102.8 71 62.0
Medtr2g044940 Medicago truncatula HOM05D004817 ORTHO05D005790 1.1e-20 102.8 73 68.5
Oeu002212.1 Olea europaea HOM05D004817 ORTHO05D005790 1.1e-20 102.8 65 80.0
Ciclev10007149m.g Citrus clementina HOM05D004817 ORTHO05D005790 1.5e-20 102.4 77 70.1
Lalb_Chr23g0276121 Lupinus albus HOM05D004817 ORTHO05D005790 1.5e-20 102.4 71 63.4
Lalb_Chr08g0232961 Lupinus albus HOM05D004817 ORTHO05D005790 2.5e-20 101.7 71 63.4
MBI18_g46513_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 2.5e-20 101.7 73 72.6
PGR031G2777 Punica granatum HOM05D004817 ORTHO05D005790 3.3e-20 101.3 78 71.8
Oeu022716.1 Olea europaea HOM05D004817 ORTHO05D005790 4.2e-20 100.9 66 72.7
Aqoxy5G02845 Aquilegia oxysepala HOM05D004817 ORTHO05D005790 5.5e-20 100.5 69 72.5
MD13G1137200 Malus domestica HOM05D004817 ORTHO05D005790 7.2e-20 100.1 76 71.1
Solyc05g053180.3 Solanum lycopersicum HOM05D004817 ORTHO05D005790 7.2e-20 100.1 70 68.6
Sopen05g031690 Solanum pennellii HOM05D004817 ORTHO05D005790 7.2e-20 100.1 70 68.6
Atru.chr4.3187 Acer truncatum HOM05D004817 ORTHO05D005790 9.5e-20 99.8 79 64.6
Cc03_g00010 Coffea canephora HOM05D004817 ORTHO05D005790 9.5e-20 99.8 65 76.9
Thecc.04G314800 Theobroma cacao HOM05D004817 ORTHO05D005790 9.5e-20 99.8 79 65.8
TPR.G12580 Trifolium pratense HOM05D004817 ORTHO05D005790 9.5e-20 99.8 74 63.5
CAN.G305.33 Capsicum annuum HOM05D004817 ORTHO05D005790 1.2e-19 99.4 70 68.6
Nitab4.5_0001769g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 1.2e-19 99.4 69 71.0
PGSC0003DMG400027147 Solanum tuberosum HOM05D004817 ORTHO05D005790 1.2e-19 99.4 70 68.6
Lj4g0003186 Lotus japonicus HOM05D004817 ORTHO05D005790 1.6e-19 99.0 71 60.6
MBI18_g40079_MAGBIO Magnolia biondii HOM05D004817 ORTHO05D005790 3.6e-19 97.8 73 67.1
PSO761G0543 Papaver somniferum HOM05D004817 ORTHO05D005790 3.6e-19 97.8 72 68.1
PGSC0003DMG400004597 Solanum tuberosum HOM05D004817 ORTHO05D005790 6.1e-19 97.1 65 73.8
MD16G1133100 Malus domestica HOM05D004817 ORTHO05D005790 1.0e-18 96.3 76 64.5
Medtr4g124250 Medicago truncatula HOM05D004817 ORTHO05D005790 1.4e-18 95.9 75 64.0
Psat4g020640 Pisum sativum HOM05D004817 ORTHO05D005790 1.8e-18 95.5 64 65.6
Nitab4.5_0000745g0110 Nicotiana tabacum HOM05D004817 ORTHO05D005790 2.3e-18 95.1 69 69.6
Peaxi162Scf00323g00924 Petunia axillaris HOM05D004817 ORTHO05D005790 2.3e-18 95.1 66 72.7
Lj6g0012255 Lotus japonicus HOM05D004817 ORTHO05D005790 8.9e-18 93.2 75 66.7
Nitab4.5_0000978g0020 Nicotiana tabacum HOM05D004817 ORTHO05D005790 8.9e-18 93.2 67 73.1
arahy.Tifrunner.gnm1.ann1.XTK2NM Arachis hypogaea HOM05D004817 ORTHO05D005790 1.5e-17 92.4 76 59.2
Lalb_Chr11g0073761 Lupinus albus HOM05D004817 ORTHO05D005790 1.5e-17 92.4 72 59.7
Solyc12g098880.2 Solanum lycopersicum HOM05D004817 ORTHO05D005790 1.5e-17 92.4 65 69.2
Sed0022538 Sechium edule HOM05D004817 ORTHO05D005790 2.0e-17 92.0 73 68.5
arahy.Tifrunner.gnm1.ann1.E7NGHZ Arachis hypogaea HOM05D004817 ORTHO05D005790 4.4e-17 90.9 77 59.7
Lalb_Chr07g0181551 Lupinus albus HOM05D004817 ORTHO05D005790 4.4e-17 90.9 74 58.1
Nitab4.5_0003998g0090 Nicotiana tabacum HOM05D004817 ORTHO05D005790 9.8e-17 89.7 67 70.1
unitig_21.g20684 Utricularia gibba HOM05D004817 ORTHO05D005790 9.8e-17 89.7 73 61.6
Lalb_Chr13g0299061 Lupinus albus HOM05D004817 ORTHO05D005790 1.3e-16 89.4 68 63.2
Sopen12g033630 Solanum pennellii HOM05D004817 ORTHO05D005790 1.3e-16 89.4 65 67.7
Cpa.g.sc146.7 Carica papaya HOM05D004817 ORTHO05D005790 2.8e-16 88.2 85 56.5
RcHm_v2.0_Chr4g0427991 Rosa chinensis HOM05D004817 ORTHO05D005790 4.9e-16 87.4 75 61.3
CDE02G4689 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 1.1e-15 86.3 66 63.6
FAN12G2725 Fragaria x ananassa HOM05D004817 ORTHO05D005790 1.1e-15 86.3 75 62.7
THA.LOC104821815 Tarenaya hassleriana HOM05D004817 ORTHO05D005790 1.1e-15 86.3 73 58.9
Sed0023994 Sechium edule HOM05D004817 ORTHO05D005790 1.4e-15 85.9 66 65.2
DCAR_023420 Daucus carota HOM05D004817 ORTHO05D005790 1.8e-15 85.5 79 57.0
ClCG05G006950 Citrullus lanatus HOM05D004817 ORTHO05D005790 3.2e-15 84.7 74 64.9
FvH4_4g21760 Fragaria vesca HOM05D004817 ORTHO05D005790 4.1e-15 84.3 75 61.3
FAN07G2633 Fragaria x ananassa HOM05D004817 ORTHO05D005790 4.1e-15 84.3 75 61.3
FAN17G1578 Fragaria x ananassa HOM05D004817 ORTHO05D005790 4.1e-15 84.3 76 63.2
DCAR_026926 Daucus carota HOM05D004817 ORTHO05D005790 7.0e-15 83.6 79 55.7
CANSAT25G3847 Cannabis sativa HOM05D004817 ORTHO05D005790 9.2e-15 83.2 81 55.6
CDE08G0719 Ceratophyllum demersum HOM05D004817 ORTHO05D005790 2.7e-14 81.6 65 61.5
CsaV3_3G015620 Cucumis sativus L. HOM05D004817 ORTHO05D005790 2.7e-14 81.6 66 66.7
unitig_744.g24175 Utricularia gibba HOM05D004817 ORTHO05D005790 3.5e-14 81.3 72 56.9
ATR0796G174 Amborella trichopoda HOM05D004817 ORTHO05D005790 5.9e-14 80.5 70 55.7
AL3G30650 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 5.9e-14 80.5 72 54.2
AT3G17580 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 5.9e-14 80.5 72 54.2
arahy.Tifrunner.gnm1.ann1.WNQ9XL Arachis hypogaea HOM05D004817 ORTHO05D005790 5.9e-14 80.5 83 50.6
CARHR092890 Cardamine hirsuta HOM05D004817 ORTHO05D005790 5.9e-14 80.5 67 55.2
unitig_746.g26894 Utricularia gibba HOM05D004817 ORTHO05D005790 7.8e-14 80.1 67 56.7
BcaB06g25835 Brassica carinata HOM05D004817 ORTHO05D005790 1.0e-13 79.7 70 55.7
AT1G48330 Arabidopsis thaliana HOM05D004817 ORTHO05D005790 1.3e-13 79.3 67 53.7
C05p48800 Brassica napus HOM05D004817 ORTHO05D005790 2.3e-13 78.6 73 52.1
BolC5t33617H Brassica oleracea HOM05D004817 ORTHO05D005790 2.3e-13 78.6 73 52.1
Carub.0003s1729 Capsella rubella HOM05D004817 ORTHO05D005790 2.9e-13 78.2 70 52.9
DCAR_002559 Daucus carota HOM05D004817 ORTHO05D005790 2.9e-13 78.2 81 60.5
BcaC05g28773 Brassica carinata HOM05D004817 ORTHO05D005790 3.9e-13 77.8 83 47.0
CARHR037950 Cardamine hirsuta HOM05D004817 ORTHO05D005790 3.9e-13 77.8 69 52.2
Thhalv10011909m.g Eutrema salsugineum HOM05D004817 ORTHO05D005790 3.9e-13 77.8 69 52.2
A05p32270 Brassica napus HOM05D004817 ORTHO05D005790 5.0e-13 77.4 73 50.7
BraA05t22056Z Brassica rapa HOM05D004817 ORTHO05D005790 5.0e-13 77.4 73 50.7
arahy.Tifrunner.gnm1.ann1.V5CRDX Arachis hypogaea HOM05D004817 ORTHO05D005790 6.6e-13 77.0 85 48.2
Thhalv10022414m.g Eutrema salsugineum HOM05D004817 ORTHO05D005790 6.6e-13 77.0 73 50.7
Eucgr.H01515 Eucalyptus grandis HOM05D004817 ORTHO05D005790 8.6e-13 76.6 78 53.8
Sp3g15710 Schrenkiella parvula HOM05D004817 ORTHO05D005790 8.6e-13 76.6 73 50.7
Aa31LG10G5430 Aethionema arabicum HOM05D004817 ORTHO05D005790 1.1e-12 76.3 72 54.2
AL1G54940 Arabidopsis lyrata HOM05D004817 ORTHO05D005790 1.1e-12 76.3 69 50.7
BcaB07g33764 Brassica carinata HOM05D004817 ORTHO05D005790 1.1e-12 76.3 69 50.7
BcaC07g37143 Brassica carinata HOM05D004817 ORTHO05D005790 1.1e-12 76.3 69 50.7
A05p21090 Brassica napus HOM05D004817 ORTHO05D005790 1.1e-12 76.3 69 50.7
A08p04790 Brassica napus HOM05D004817 ORTHO05D005790 1.1e-12 76.3 69 50.7
C08p05160 Brassica napus HOM05D004817 ORTHO05D005790 1.1e-12 76.3 69 50.7
BolC5t32277H Brassica oleracea HOM05D004817 ORTHO05D005790 1.1e-12 76.3 69 50.7
BraA05t21012Z Brassica rapa HOM05D004817 ORTHO05D005790 1.1e-12 76.3 69 50.7
BraA08t32509Z Brassica rapa HOM05D004817 ORTHO05D005790 1.1e-12 76.3 69 50.7
Aa31LG8G4450 Aethionema arabicum HOM05D004817 ORTHO05D005790 1.5e-12 75.9 76 48.7
BcaB04g18952 Brassica carinata HOM05D004817 ORTHO05D005790 1.5e-12 75.9 73 52.1
BcaC01g03751 Brassica carinata HOM05D004817 ORTHO05D005790 1.5e-12 75.9 73 52.1
A03p40250 Brassica napus HOM05D004817 ORTHO05D005790 1.5e-12 75.9 73 52.1
C03p48950 Brassica napus HOM05D004817 ORTHO05D005790 1.5e-12 75.9 73 52.1
BolC3t17174H Brassica oleracea HOM05D004817 ORTHO05D005790 1.5e-12 75.9 73 52.1
BraA03t13178Z Brassica rapa HOM05D004817 ORTHO05D005790 1.5e-12 75.9 73 52.1
Carub.0001s3746 Capsella rubella HOM05D004817 ORTHO05D005790 1.5e-12 75.9 72 50.0
BcaB04g17438 Brassica carinata HOM05D004817 ORTHO05D005790 2.5e-12 75.1 69 50.7
BcaC09g48714 Brassica carinata HOM05D004817 ORTHO05D005790 2.5e-12 75.1 73 49.3
Sp1g35290 Schrenkiella parvula HOM05D004817 ORTHO05D005790 2.5e-12 75.1 69 50.7
BcaB04g20835 Brassica carinata HOM05D004817 ORTHO05D005790 3.3e-12 74.7 74 48.6
BcaC05g27577 Brassica carinata HOM05D004817 ORTHO05D005790 3.3e-12 74.7 69 49.3
BcaC08g43030 Brassica carinata HOM05D004817 ORTHO05D005790 3.3e-12 74.7 69 49.3
A01p36770 Brassica napus HOM05D004817 ORTHO05D005790 3.3e-12 74.7 74 48.6
C05p35610 Brassica napus HOM05D004817 ORTHO05D005790 3.3e-12 74.7 69 49.3
C06p02830 Brassica napus HOM05D004817 ORTHO05D005790 3.3e-12 74.7 69 49.3
BolC6t35412H Brassica oleracea HOM05D004817 ORTHO05D005790 3.3e-12 74.7 69 49.3
BraA01t03738Z Brassica rapa HOM05D004817 ORTHO05D005790 3.3e-12 74.7 74 48.6
DCAR_030417 Daucus carota HOM05D004817 ORTHO05D005790 4.3e-12 74.3 94 52.1
BraA06t23656Z Brassica rapa HOM05D004817 ORTHO05D005790 5.6e-12 73.9 69 49.3
Haze_00750 Corylus avellana HOM05D004817 ORTHO05D005790 7.3e-12 73.6 57 71.9
Zm00001eb332330 Zea mays HOM05D004817 ORTHO05D005790 7.3e-12 73.6 83 48.2
TAR365G0774 Trochodendron aralioides HOM05D004817 ORTHO05D005790 1.2e-11 72.8 86 48.8
Zm00001eb129600 Zea mays HOM05D004817 ORTHO05D005790 4.7e-11 70.9 74 52.7
CANSAT78G0586 Cannabis sativa HOM05D004817 ORTHO05D005790 1.5e-09 65.9 80 45.0
Os01g0288200 Oryza sativa ssp. japonica HOM05D004817 ORTHO05D005790 3.7e-08 61.2 75 50.7
HPP92_010590 Vanilla planifolia HOM05D004817 ORTHO05D005790 3.7e-08 61.2 49 67.3
Zm00001eb354550 Zea mays HOM05D004817 ORTHO05D005790 1.2e-06 56.2 92 41.3
AUR62002531 Chenopodium quinoa HOM05D004817 ORTHO05D005790 2.0e-06 55.5 31 74.2


User provided reference genes

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