Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 5.0e-299 1030.4 545 100.0
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 7.6e-231 803.9 571 74.8
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 2.4e-216 755.7 571 72.3
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 5.1e-211 738.0 573 70.2
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 3.6e-204 715.3 560 70.2
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 3.0e-203 712.2 569 68.7
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 3.9e-203 711.8 570 68.8
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 1.2e-199 700.3 574 66.9
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.3e-198 696.8 558 68.1
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 1.4e-197 693.3 566 68.2
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 3.2e-197 692.2 558 67.0
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 1.6e-196 689.9 573 66.5
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 4.7e-196 688.3 553 67.3
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 1.0e-195 687.2 558 67.7
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 8.8e-195 684.1 564 67.2
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.5e-194 683.3 559 67.3
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 5.7e-194 681.4 570 65.4
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 2.8e-193 679.1 564 67.4
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 3.7e-193 678.7 553 65.5
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 9.1e-192 674.1 573 64.9
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 1.2e-191 673.7 573 64.6
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 5.9e-191 671.4 560 64.8
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 1.0e-190 670.6 572 65.0
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 6.5e-190 667.9 573 64.7
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 6.5e-190 667.9 570 65.1
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 3.2e-189 665.6 573 64.0
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 3.2e-189 665.6 573 64.6
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 3.2e-189 665.6 591 62.8
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 7.2e-189 664.5 560 65.2
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 3.9e-187 658.7 571 64.3
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 3.9e-187 658.7 569 64.0
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 1.5e-186 656.8 570 63.5
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 2.0e-186 656.4 569 63.8
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 2.0e-186 656.4 587 61.7
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 3.3e-186 655.6 561 65.2
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 5.7e-186 654.8 573 63.4
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 1.3e-185 653.7 559 66.0
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.3e-185 653.7 559 66.4
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 4.8e-185 651.7 560 63.8
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 8.2e-185 651.0 559 65.8
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-184 649.8 559 66.2
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 2.4e-184 649.4 570 63.2
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 4.1e-184 648.7 555 64.5
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.1e-184 648.7 553 66.7
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 7.0e-184 647.9 570 65.6
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 9.1e-184 647.5 573 62.7
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 1.2e-183 647.1 561 64.5
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 1.6e-183 646.7 557 63.6
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 1.6e-183 646.7 575 63.5
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 2.0e-183 646.4 567 63.1
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.5e-183 645.2 574 64.5
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 7.7e-183 644.4 567 62.4
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 1.0e-182 644.0 571 63.0
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 1.7e-182 643.3 565 64.1
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 3.8e-182 642.1 560 62.7
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 3.8e-182 642.1 560 63.2
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 5.0e-182 641.7 567 62.6
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 8.5e-182 641.0 562 64.6
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 8.5e-182 641.0 562 63.9
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 5.5e-181 638.3 573 61.3
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 7.2e-181 637.9 578 62.1
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 9.4e-181 637.5 562 63.0
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 2.1e-180 636.3 568 61.3
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 4.7e-180 635.2 573 61.3
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 8.0e-180 634.4 632 57.1
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 1.8e-179 633.3 573 61.6
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 3.3e-178 629.0 558 62.4
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 3.3e-178 629.0 562 63.5
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 3.3e-178 629.0 561 62.6
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 4.4e-178 628.6 559 62.8
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 5.7e-178 628.2 559 61.9
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 7.5e-178 627.9 566 61.3
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 9.7e-178 627.5 560 61.6
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 1.3e-177 627.1 560 61.8
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 1.7e-177 626.7 557 61.9
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 2.2e-177 626.3 575 59.8
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 1.2e-175 620.5 507 66.3
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 4.5e-175 618.6 560 63.2
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 3.8e-174 615.5 525 65.5
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 1.9e-173 613.2 552 61.4
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 2.5e-173 612.8 552 61.4
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 2.5e-173 612.8 552 61.4
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 7.2e-173 611.3 552 61.1
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 7.2e-173 611.3 552 61.1
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 3.6e-172 609.0 559 61.4
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 4.5e-167 592.0 555 58.2
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 7.7e-167 591.3 572 58.4
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 4.2e-165 585.5 478 68.2
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 7.5e-162 574.7 564 56.4
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 1.7e-161 573.5 571 57.1
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 8.3e-161 571.2 559 58.7
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 3.1e-160 569.3 527 60.0
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 1.6e-159 567.0 631 52.8
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 4.5e-159 565.5 577 54.8
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 1.9e-141 506.9 508 57.1
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 2.3e-118 430.3 572 43.7
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 1.6e-116 424.1 446 56.5
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 2.8e-116 423.3 401 58.1
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 6.4e-113 412.1 538 44.2
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 1.3e-102 377.9 386 60.6
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 2.8e-100 370.2 577 39.7
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 3.8e-97 359.8 542 41.1
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.9e-94 349.7 238 76.1
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 8.5e-89 332.0 225 73.3
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 3.2e-88 330.1 592 36.3
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 2.9e-81 307.0 292 62.3
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 5.7e-77 292.7 301 59.8
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 9.4e-72 275.4 267 56.2
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 2.8e-68 263.8 351 50.4
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 2.8e-68 263.8 211 69.2
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 1.3e-65 255.0 174 67.8
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 2.6e-53 214.2 152 73.7
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 1.9e-48 198.0 204 56.4
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 2.0e-45 188.0 590 28.6
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 6.8e-38 162.9 152 60.5
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 5.4e-35 153.3 155 61.9
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.5e-21 108.6 71 67.6
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 2.4e-14 84.7 56 80.4
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 4.3e-08 63.9 41 70.7


User provided reference genes

Program Settings