Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G6243 Salvia bowleyana HOM05D003513 ORTHO05D004660 3.5e-114 415.2 253 100.0
MSTRG.8971 Avicennia marina HOM05D003513 ORTHO05D004660 4.7e-66 255.4 227 65.2
SGA_v2.0_scaffold32G12967 Striga asiatica HOM05D003513 ORTHO05D004660 3.0e-65 252.7 207 67.6
MSTRG.8970 Avicennia marina HOM05D003513 ORTHO05D004660 1.7e-63 246.9 227 62.6
vmacro01922 Vaccinium macrocarpon HOM05D003513 ORTHO05D004660 6.1e-58 228.4 234 58.1
Oeu010478.1 Olea europaea HOM05D003513 ORTHO05D004660 4.0e-57 225.7 227 56.4
Oeu059873.1 Olea europaea HOM05D003513 ORTHO05D004660 7.5e-56 221.5 228 56.6
unitig_0.g631 Utricularia gibba HOM05D003513 ORTHO05D004660 7.5e-56 221.5 202 62.9
CSS0016653 Camellia sinensis var. sinensis HOM05D003513 ORTHO05D004660 1.1e-54 217.6 232 55.6
Rhsim11G0147300 Rhododendron simsii HOM05D003513 ORTHO05D004660 7.0e-54 214.9 254 53.5
COL.COLO4_17824 Corchorus olitorius HOM05D003513 ORTHO05D004660 1.2e-53 214.2 206 60.7
Atru.chr4.2879 Acer truncatum HOM05D003513 ORTHO05D004660 2.0e-53 213.4 204 60.3
Duzib248G1448 Durio zibethinus HOM05D003513 ORTHO05D004660 2.7e-53 213.0 206 60.2
Lj9A339T51 Lonicera japonica HOM05D003513 ORTHO05D004660 2.7e-53 213.0 210 57.6
Actinidia00338 Actinidia chinensis HOM05D003513 ORTHO05D004660 5.9e-53 211.8 230 57.0
Hma1.2p1_0661F.1_g197860 Hydrangea macrophylla HOM05D003513 ORTHO05D004660 7.7e-53 211.5 211 59.7
Manes.07G049900 Manihot esculenta HOM05D003513 ORTHO05D004660 2.3e-52 209.9 205 57.6
Actinidia02426 Actinidia chinensis HOM05D003513 ORTHO05D004660 6.5e-52 208.4 209 58.9
TWI23G0398 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 6.5e-52 208.4 206 59.2
Thecc.02G033900 Theobroma cacao HOM05D003513 ORTHO05D004660 1.5e-51 207.2 204 60.3
Sopen01g048910 Solanum pennellii HOM05D003513 ORTHO05D004660 3.3e-51 206.1 231 53.7
PGR042G0778 Punica granatum HOM05D003513 ORTHO05D004660 4.2e-51 205.7 207 57.0
Duzib052G1139 Durio zibethinus HOM05D003513 ORTHO05D004660 5.5e-51 205.3 206 59.2
PGSC0003DMG400005104 Solanum tuberosum HOM05D003513 ORTHO05D004660 5.5e-51 205.3 231 53.2
Solyc01g106560.4 Solanum lycopersicum HOM05D003513 ORTHO05D004660 7.2e-51 204.9 231 54.5
Sabra09G0063800 Salix brachista HOM05D003513 ORTHO05D004660 1.2e-50 204.1 207 58.5
TAR375G0591 Trochodendron aralioides HOM05D003513 ORTHO05D004660 1.2e-50 204.1 234 54.3
TWI14G0477 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 1.6e-50 203.8 206 56.3
GSVIVG01036987001 Vitis vinifera HOM05D003513 ORTHO05D004660 2.8e-50 203.0 234 53.0
MD05G1110900 Malus domestica HOM05D003513 ORTHO05D004660 4.7e-50 202.2 226 52.2
Potri.009G082200 Populus trichocarpa HOM05D003513 ORTHO05D004660 4.7e-50 202.2 226 53.5
Eucgr.I02512 Eucalyptus grandis HOM05D003513 ORTHO05D004660 8.0e-50 201.4 205 58.5
Gohir.D02G234600 Gossypium hirsutum HOM05D003513 ORTHO05D004660 1.0e-49 201.1 204 59.8
Prupe.8G155900 Prunus persica HOM05D003513 ORTHO05D004660 1.0e-49 201.1 197 57.9
CANSAT11G1387 Cannabis sativa HOM05D003513 ORTHO05D004660 2.3e-49 199.9 205 57.6
Gorai.005G262600 Gossypium raimondii HOM05D003513 ORTHO05D004660 4.0e-49 199.1 205 59.5
QL11p027784 Quercus lobata HOM05D003513 ORTHO05D004660 5.2e-49 198.7 230 53.5
Dinv17746 Davidia involucrata HOM05D003513 ORTHO05D004660 8.9e-49 198.0 248 56.5
Medtr2g010510 Medicago truncatula HOM05D003513 ORTHO05D004660 8.9e-49 198.0 206 54.9
Cfa004752 Carpinus fangiana HOM05D003513 ORTHO05D004660 1.2e-48 197.6 206 57.8
ClCG02G003790 Citrullus lanatus HOM05D003513 ORTHO05D004660 1.5e-48 197.2 206 56.8
Gohir.A03G213100 Gossypium hirsutum HOM05D003513 ORTHO05D004660 1.5e-48 197.2 206 58.7
Ciclev10028868m.g Citrus clementina HOM05D003513 ORTHO05D004660 2.6e-48 196.4 205 56.1
MELO3C013317.2 Cucumis melo HOM05D003513 ORTHO05D004660 4.4e-48 195.7 206 57.8
CsaV3_7G001360 Cucumis sativus L. HOM05D003513 ORTHO05D004660 1.3e-47 194.1 206 54.4
Peaxi162Scf00016g03328 Petunia axillaris HOM05D003513 ORTHO05D004660 2.2e-47 193.4 212 56.1
Cfa003376 Carpinus fangiana HOM05D003513 ORTHO05D004660 3.7e-47 192.6 230 52.2
EL10Ac4g09206 Beta vulgaris HOM05D003513 ORTHO05D004660 6.3e-47 191.8 216 51.9
FAN15G2646 Fragaria x ananassa HOM05D003513 ORTHO05D004660 6.3e-47 191.8 231 50.6
MBI18_g04900_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 8.3e-47 191.4 261 47.1
MBI18_g12443_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 1.8e-46 190.3 261 46.7
Ca_00197_v3 Cicer arietinum L. HOM05D000871 ORTHO05D000770 2.4e-46 189.9 204 53.9
RcHm_v2.0_Chr6g0247131 Rosa chinensis HOM05D003513 ORTHO05D004660 2.4e-46 189.9 197 55.8
FvH4_2g02710 Fragaria vesca HOM05D003513 ORTHO05D004660 7.0e-46 188.3 201 55.2
FAN20G2897 Fragaria x ananassa HOM05D003513 ORTHO05D004660 1.2e-45 187.6 201 54.2
Cc02_g20350 Coffea canephora HOM05D003513 ORTHO05D004660 2.7e-45 186.4 214 53.3
FAN24G3528 Fragaria x ananassa HOM05D003513 ORTHO05D004660 2.7e-45 186.4 231 50.2
Psat1g212080 Pisum sativum HOM05D003513 ORTHO05D004660 3.5e-45 186.0 183 56.3
Potri.001G287900 Populus trichocarpa HOM05D003513 ORTHO05D004660 1.3e-44 184.1 257 52.1
FAN27G0638 Fragaria x ananassa HOM05D003513 ORTHO05D004660 2.3e-44 183.3 210 53.3
CiPaw.16G055200 Carya illinoinensis HOM05D003513 ORTHO05D004660 1.5e-43 180.6 205 54.6
PSO384G0236 Papaver somniferum HOM05D003513 ORTHO05D004660 1.5e-43 180.6 268 49.6
Lj6g0027000 Lotus japonicus HOM05D003513 ORTHO05D004660 7.3e-43 178.3 249 45.8
Aqoxy5G03939 Aquilegia oxysepala HOM05D003513 ORTHO05D004660 1.6e-42 177.2 240 48.8
PSO339G4304 Papaver somniferum HOM05D003513 ORTHO05D004660 1.6e-42 177.2 216 50.5
arahy.Tifrunner.gnm1.ann1.2E8PRH Arachis hypogaea HOM05D003513 ORTHO05D004660 3.6e-42 176.0 239 46.0
Os07g0213400 Oryza sativa ssp. japonica HOM05D003513 ORTHO05D004660 3.6e-42 176.0 203 54.7
arahy.Tifrunner.gnm1.ann1.K4QFJX Arachis hypogaea HOM05D003513 ORTHO05D004660 4.7e-42 175.6 239 46.4
Lsat_1_v5_gn_7_84220 Lactuca sativa HOM05D003513 ORTHO05D004660 4.7e-42 175.6 228 50.4
Sp3g05980 Schrenkiella parvula HOM05D003513 ORTHO05D004660 6.1e-42 175.3 205 53.7
Sed0007617 Sechium edule HOM05D003513 ORTHO05D004660 6.1e-42 175.3 206 51.9
Aa31LG8G12720 Aethionema arabicum HOM05D003513 ORTHO05D004660 8.0e-42 174.9 203 53.7
VMungo0540G2261 Vigna mungo HOM05D003513 ORTHO05D004660 1.0e-41 174.5 244 49.2
Glyma.15G062000 Glycine max HOM05D003513 ORTHO05D004660 1.4e-41 174.1 253 45.5
arahy.Tifrunner.gnm1.ann1.SQB86K Arachis hypogaea HOM05D003513 ORTHO05D004660 2.3e-41 173.3 241 46.9
THA.LOC104807196 Tarenaya hassleriana HOM05D003513 ORTHO05D004660 2.3e-41 173.3 198 51.5
Lalb_Chr18g0060191 Lupinus albus HOM05D003513 ORTHO05D004660 4.0e-41 172.6 256 44.9
ECA236G2279 Erigeron canadensis HOM05D003513 ORTHO05D004660 8.9e-41 171.4 231 52.8
DCAR_029853 Daucus carota HOM05D003513 ORTHO05D004660 1.2e-40 171.0 257 45.1
CiPaw.05G024600 Carya illinoinensis HOM05D003513 ORTHO05D004660 1.5e-40 170.6 207 53.6
MD10G1114400 Malus domestica HOM05D003513 ORTHO05D004660 3.4e-40 169.5 183 53.6
Zm00001eb325060 Zea mays HOM05D003513 ORTHO05D004660 3.4e-40 169.5 209 54.1
Glyma.13G253000 Glycine max HOM05D003513 ORTHO05D004660 1.3e-39 167.5 252 46.4
C03p42610 Brassica napus HOM05D003513 ORTHO05D004660 1.7e-39 167.2 199 51.3
SHI04900 Sapria himalayana HOM05D003513 ORTHO05D004660 2.9e-39 166.4 181 55.8
BraA03t12683Z Brassica rapa HOM05D003513 ORTHO05D004660 4.9e-39 165.6 199 50.3
Lj6g0027758 Lotus japonicus HOM05D003513 ORTHO05D004660 4.9e-39 165.6 216 48.1
HPP92_011751 Vanilla planifolia HOM05D003513 ORTHO05D004660 4.9e-39 165.6 211 48.3
arahy.Tifrunner.gnm1.ann1.C4ZNB5 Arachis hypogaea HOM05D003513 ORTHO05D004660 6.4e-39 165.2 244 44.7
AL3G45960 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 8.3e-39 164.9 208 50.0
AUR62005013 Chenopodium quinoa HOM05D003513 ORTHO05D004660 3.2e-38 162.9 206 49.5
Dinv03362 Davidia involucrata HOM05D003513 ORTHO05D004660 1.6e-37 160.6 149 62.4
Sp7g31420 Schrenkiella parvula HOM05D003513 ORTHO05D004660 2.7e-37 159.8 210 49.0
A03p35030 Brassica napus HOM05D003513 ORTHO05D004660 4.6e-37 159.1 199 50.3
Nn4g22684 Nelumbo nucifera HOM05D003513 ORTHO05D004660 6.0e-37 158.7 170 54.7
Migut.B00497 Erythranthe guttata HOM05D003513 ORTHO05D004660 1.0e-36 157.9 162 56.2
C01p05020 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-36 157.5 208 48.1
Cpa.g.sc20.72 Carica papaya HOM05D003513 ORTHO05D004660 1.7e-36 157.1 149 59.7
AL7G17790 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 2.3e-36 156.8 183 53.0
Carub.0003s2847 Capsella rubella HOM05D003513 ORTHO05D004660 2.3e-36 156.8 204 48.0
BcaC09g52179 Brassica carinata HOM05D003513 ORTHO05D004660 3.9e-36 156.0 210 47.6
BolC1t00484H Brassica oleracea HOM05D003513 ORTHO05D004660 3.9e-36 156.0 210 47.6
AUR62000955 Chenopodium quinoa HOM05D003513 ORTHO05D004660 6.6e-36 155.2 206 48.1
HanXRQChr17g0550541 Helianthus annuus HOM05D003513 ORTHO05D004660 1.5e-35 154.1 200 51.0
Lj1g0004946 Lotus japonicus HOM05D003513 ORTHO05D004660 1.9e-35 153.7 256 48.8
BolC3t16531H Brassica oleracea HOM05D003513 ORTHO05D004660 4.3e-35 152.5 201 48.3
Atru.chr5.2163 Acer truncatum HOM05D003513 ORTHO05D004660 7.3e-35 151.8 148 59.5
BraA01t00446Z Brassica rapa HOM05D003513 ORTHO05D004660 2.1e-34 150.2 198 47.0
BcaB07g32937 Brassica carinata HOM05D003513 ORTHO05D004660 4.7e-34 149.1 168 51.8
Sabra16G0180200 Salix brachista HOM05D003513 ORTHO05D004660 6.2e-34 148.7 234 43.6
ATR0681G195 Amborella trichopoda HOM05D003513 ORTHO05D004660 8.9e-33 144.8 259 40.5
Nitab4.5_0001477g0150 Nicotiana tabacum HOM05D003513 ORTHO05D004660 1.5e-32 144.1 231 42.4
CDE04G2077 Ceratophyllum demersum HOM05D000016 ORTHO05D000538 2.6e-32 143.3 195 46.2
AT4G33690 Arabidopsis thaliana HOM05D003513 ORTHO05D004660 2.2e-31 140.2 172 51.2
A01p04630 Brassica napus HOM05D003513 ORTHO05D004660 6.4e-31 138.7 198 45.5
Mapoly0037s0029 Marchantia polymorpha HOM05D003513 ORTHO05D004660 1.1e-30 137.9 172 45.9
SEGI_16177 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 1.9e-30 137.1 241 40.2
SMO119G0189 Selaginella moellendorffii HOM05D003513 ORTHO05D004660 2.4e-30 136.7 207 44.0
CDE07G1727 Ceratophyllum demersum HOM05D003513 ORTHO05D004660 3.2e-30 136.3 225 42.2
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 2.3e-28 130.2 222 42.3
AagrBONN_evm.TU.Sc2ySwM_289.2 Anthoceros agrestis HOM05D003513 ORTHO05D004660 2.5e-27 126.7 234 41.0
AagrBONN_evm.TU.Sc2ySwM_362.2667 Anthoceros agrestis HOM05D003513 ORTHO05D004660 2.5e-27 126.7 234 41.0
Sc21g0000900 Simmondsia chinensis HOM05D003513 ORTHO05D004660 5.6e-27 125.6 155 52.3
HPP92_025257 Vanilla planifolia HOM05D003513 ORTHO05D004660 1.2e-26 124.4 165 44.8
SEGI_38183 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 2.8e-26 123.2 236 39.4
Pp3c17_21630 Physcomitrium patens HOM05D003513 ORTHO05D004660 1.8e-25 120.6 197 38.6
Carub.0007s0673 Capsella rubella HOM05D003513 ORTHO05D004660 2.3e-25 120.2 151 51.7
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 4.0e-25 119.4 197 40.6
Nitab4.5_0007763g0010 Nicotiana tabacum HOM05D003513 ORTHO05D004660 6.8e-25 118.6 175 42.3
Hund24144 Selenicereus undatus HOM05D003513 ORTHO05D004660 2.6e-24 116.7 147 50.3
CAN.G192.6 Capsicum annuum HOM05D003513 ORTHO05D004660 1.3e-23 114.4 156 46.2
A05p21550 Brassica napus HOM05D003513 ORTHO05D004660 1.1e-22 111.3 180 42.2
BraA05t21075Z Brassica rapa HOM05D003513 ORTHO05D004660 1.1e-22 111.3 180 42.2
Glyma.07G229300 Glycine max HOM05D003513 ORTHO05D004660 2.1e-21 107.1 101 58.4
BcaB04g17698 Brassica carinata HOM05D003513 ORTHO05D004660 2.7e-21 106.7 180 42.2
Eucgr.L02047 Eucalyptus grandis HOM05D003513 ORTHO05D004660 4.6e-21 105.9 140 47.9
BcaC08g44431 Brassica carinata HOM05D003513 ORTHO05D013524 2.3e-20 103.6 180 40.6
BcaB02g10961 Brassica carinata HOM05D003513 ORTHO05D004660 3.9e-20 102.8 75 69.3
A04p04130 Brassica napus HOM05D003513 ORTHO05D004660 3.9e-20 102.8 168 42.9
TAR629G2534 Trochodendron aralioides HOM05D003513 ORTHO05D004660 8.6e-20 101.7 114 55.3
A09p29610 Brassica napus HOM05D003513 ORTHO05D004660 2.1e-18 97.1 167 43.1
TPR.G22787 Trifolium pratense HOM05D003513 ORTHO05D004660 8.1e-18 95.1 140 44.3
CARHR105270 Cardamine hirsuta HOM05D003513 ORTHO05D004660 5.2e-17 92.4 143 40.6
BraA03t15374Z Brassica rapa HOM05D003513 ORTHO05D004660 5.8e-16 89.0 168 39.3
A08p11320 Brassica napus HOM05D003513 ORTHO05D004660 9.9e-16 88.2 63 69.8
A10p16400 Brassica napus HOM05D003513 ORTHO05D004660 9.9e-16 88.2 63 69.8
C06p15560 Brassica napus HOM05D003513 ORTHO05D004660 9.9e-16 88.2 63 69.8
C06p18710 Brassica napus HOM05D003513 ORTHO05D004660 9.9e-16 88.2 58 75.9
C08p23080 Brassica napus HOM05D003513 ORTHO05D004660 9.9e-16 88.2 63 69.8
A09p33590 Brassica napus HOM05D003513 ORTHO05D004660 8.4e-15 85.1 56 76.8
A03p66860 Brassica napus HOM05D003513 ORTHO05D004660 1.4e-14 84.3 59 71.2
A03p61430 Brassica napus HOM05D003513 ORTHO05D004660 2.4e-14 83.6 56 75.0
BraA09t38150Z Brassica rapa HOM05D003513 ORTHO05D004660 3.2e-14 83.2 75 60.0
BolC8t52234H Brassica oleracea HOM05D003513 ORTHO05D004660 1.2e-13 81.3 168 39.9
Zm00001eb303370 Zea mays HOM05D003513 ORTHO05D004660 1.6e-13 80.9 133 40.6
C08p46960 Brassica napus HOM05D003513 ORTHO05D013524 1.3e-12 77.8 168 39.3
Thhalv10021452m.g Eutrema salsugineum HOM05D003513 ORTHO05D004660 6.6e-12 75.5 136 41.2
Phvul.006G197800 Phaseolus vulgaris HOM05D003513 ORTHO05D004660 1.1e-11 74.7 183 34.4
C01p31670 Brassica napus HOM05D003513 ORTHO05D015800 1.9e-11 73.9 54 68.5
A05p23280 Brassica napus HOM05D003513 ORTHO05D004660 2.8e-10 70.1 46 73.9
BraA05t21192Z Brassica rapa HOM05D003513 ORTHO05D004660 2.8e-10 70.1 46 73.9
TWI59G0638 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 4.7e-10 69.3 84 45.2
BcaC06g33105 Brassica carinata HOM05D005554 ORTHO05D021652 8.1e-10 68.6 67 56.7
Gohir.A01G179633 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.4e-09 67.0 51 68.6
BcaB05g23799 Brassica carinata HOM05D003513 ORTHO05D004660 1.5e-08 64.3 119 39.5
Gorai.002G212100 Gossypium raimondii HOM05D003513 ORTHO05D004660 5.8e-08 62.4 51 66.7
BcaB06g26524 Brassica carinata HOM05D005554 ORTHO05D021652 9.9e-08 61.6 61 57.4
TAR636G1841 Trochodendron aralioides HOM05D003513 ORTHO05D004660 1.3e-07 61.2 87 47.1
MCO09G316 Micromonas commoda HOM05D003513 ORTHO05D004660 1.7e-07 60.8 176 29.5
CBR_g21766 Chara braunii HOM05D003513 ORTHO05D004660 1.4e-06 57.8 101 35.6


User provided reference genes

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