Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G6235 Salvia bowleyana HOM05D003683 ORTHO05D004143 4.6e-46 187.6 98 100.0
Oeu064712.1 Olea europaea HOM05D003683 ORTHO05D004143 2.3e-13 79.0 68 66.2
Oeu056803.1 Olea europaea HOM05D003683 ORTHO05D004143 3.0e-13 78.6 68 63.2
Hma1.2p1_0138F.1_g062970 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 5.2e-13 77.8 65 67.7
ECA233G3941 Erigeron canadensis HOM05D003683 ORTHO05D004143 2.0e-12 75.9 75 58.7
Haze_09035 Corylus avellana HOM05D003683 ORTHO05D004143 5.7e-12 74.3 76 60.5
QL12p015617 Quercus lobata HOM05D003683 ORTHO05D004143 5.7e-12 74.3 66 59.1
GSVIVG01019925001 Vitis vinifera HOM05D003683 ORTHO05D004143 5.7e-12 74.3 68 61.8
CSS0019244 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 7.5e-12 73.9 74 55.4
Gohir.A03G010200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 7.5e-12 73.9 89 51.7
COL.COLO4_23839 Corchorus olitorius HOM05D003683 ORTHO05D004143 9.8e-12 73.6 67 58.2
MSTRG.13795 Avicennia marina HOM05D003683 ORTHO05D004143 1.3e-11 73.2 92 51.1
Cfa012041 Carpinus fangiana HOM05D003683 ORTHO05D004143 2.2e-11 72.4 75 60.0
DCAR_008443 Daucus carota HOM05D003683 ORTHO05D004143 2.8e-11 72.0 65 60.0
Dinv39058 Davidia involucrata HOM05D003683 ORTHO05D004143 2.8e-11 72.0 75 53.3
Gohir.A12G222400 Gossypium hirsutum HOM05D003683 ORTHO05D004143 2.8e-11 72.0 62 62.9
Actinidia14483 Actinidia chinensis HOM05D003683 ORTHO05D004143 6.3e-11 70.9 70 57.1
Migut.E01009 Erythranthe guttata HOM05D003683 ORTHO05D004143 6.3e-11 70.9 68 64.7
Lj2A204T52 Lonicera japonica HOM05D003683 ORTHO05D004143 6.3e-11 70.9 77 58.4
Sopen08g003530 Solanum pennellii HOM05D003683 ORTHO05D004143 6.3e-11 70.9 80 56.2
Gohir.D03G159600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 8.3e-11 70.5 77 54.5
Gorai.003G167900 Gossypium raimondii HOM05D003683 ORTHO05D004143 8.3e-11 70.5 77 54.5
Sed0004645 Sechium edule HOM05D003683 ORTHO05D004143 8.3e-11 70.5 76 53.9
Cc08_g13490 Coffea canephora HOM05D003683 ORTHO05D004143 1.1e-10 70.1 90 46.7
Eucgr.E00491 Eucalyptus grandis HOM05D003683 ORTHO05D004143 1.1e-10 70.1 67 59.7
CSS0021060 Camellia sinensis var. sinensis HOM05D003683 ORTHO05D004143 1.4e-10 69.7 70 52.9
ClCG05G002130 Citrullus lanatus HOM05D003683 ORTHO05D004143 1.4e-10 69.7 86 51.2
Gorai.008G241000 Gossypium raimondii HOM05D003683 ORTHO05D004143 1.4e-10 69.7 62 61.3
Thecc.03G264300 Theobroma cacao HOM05D003683 ORTHO05D004143 1.8e-10 69.3 67 56.7
CAN.G630.45 Capsicum annuum HOM05D003683 ORTHO05D004143 2.4e-10 68.9 77 50.6
CiPaw.11G145300 Carya illinoinensis HOM05D003683 ORTHO05D004143 2.4e-10 68.9 68 54.4
Peaxi162Scf00102g01336 Petunia axillaris HOM05D003683 ORTHO05D004143 2.4e-10 68.9 70 58.6
PGR042G1830 Punica granatum HOM05D003683 ORTHO05D004143 3.1e-10 68.6 67 56.7
ClCG01G003480 Citrullus lanatus HOM05D003683 ORTHO05D004143 4.1e-10 68.2 65 56.9
MELO3C005596.2 Cucumis melo HOM05D003683 ORTHO05D004143 4.1e-10 68.2 65 58.5
Dinv43725 Davidia involucrata HOM05D003683 ORTHO05D004143 4.1e-10 68.2 76 57.9
Dinv37740 Davidia involucrata HOM05D003683 ORTHO05D004143 9.1e-10 67.0 70 51.4
Thhalv10001694m.g Eutrema salsugineum HOM05D003683 ORTHO05D004143 1.2e-09 66.6 75 56.0
Manes.01G071300 Manihot esculenta HOM05D003683 ORTHO05D004143 1.2e-09 66.6 65 60.0
Potri.003G117200 Populus trichocarpa HOM05D003683 ORTHO05D004143 1.2e-09 66.6 69 56.5
PGSC0003DMG400012487 Solanum tuberosum HOM05D003683 ORTHO05D004143 1.2e-09 66.6 81 53.1
CiPaw.12G102800 Carya illinoinensis HOM05D003683 ORTHO05D004143 1.6e-09 66.2 67 55.2
CsaV3_5G003580 Cucumis sativus L. HOM05D003683 ORTHO05D004143 1.6e-09 66.2 66 57.6
Nn4g26435 Nelumbo nucifera HOM05D003683 ORTHO05D004143 2.0e-09 65.9 66 53.0
PGSC0003DMG400003921 Solanum tuberosum HOM05D003683 ORTHO05D004143 2.0e-09 65.9 82 45.1
Lsat_1_v5_gn_6_10220 Lactuca sativa HOM05D003683 ORTHO05D004143 2.7e-09 65.5 66 57.6
Ciclev10023705m.g Citrus clementina HOM05D003683 ORTHO05D004143 3.5e-09 65.1 62 58.1
Dinv32390 Davidia involucrata HOM05D003683 ORTHO05D004143 3.5e-09 65.1 76 56.6
Gohir.D12G224900 Gossypium hirsutum HOM05D003683 ORTHO05D004143 3.5e-09 65.1 62 58.1
Manes.02G031900 Manihot esculenta HOM05D003683 ORTHO05D004143 3.5e-09 65.1 67 56.7
Sopen08g028050 Solanum pennellii HOM05D003683 ORTHO05D004143 5.9e-09 64.3 82 43.9
Hma1.2p1_3528F.1_g336600 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 7.7e-09 63.9 81 51.9
Hund11555 Selenicereus undatus HOM05D003683 ORTHO05D004143 7.7e-09 63.9 69 60.9
Solyc08g079690.4 Solanum lycopersicum HOM05D003683 ORTHO05D004143 7.7e-09 63.9 74 45.9
A05p05480 Brassica napus HOM05D003683 ORTHO05D004143 1.0e-08 63.5 75 53.3
BraA05t19518Z Brassica rapa HOM05D003683 ORTHO05D004143 1.0e-08 63.5 75 53.3
BcaC02g12206 Brassica carinata HOM05D003683 ORTHO05D004143 1.3e-08 63.2 75 53.3
C04p06420 Brassica napus HOM05D003683 ORTHO05D004143 1.3e-08 63.2 75 53.3
BolC4t22265H Brassica oleracea HOM05D003683 ORTHO05D004143 1.3e-08 63.2 75 53.3
CARHR140640 Cardamine hirsuta HOM05D003683 ORTHO05D004143 1.3e-08 63.2 75 56.0
Sabra03G0081600 Salix brachista HOM05D003683 ORTHO05D004143 1.3e-08 63.2 69 53.6
TWI60G0451 Tripterygium wilfordii HOM05D003683 ORTHO05D004143 1.3e-08 63.2 65 56.9
Cfa001703 Carpinus fangiana HOM05D003683 ORTHO05D004143 1.7e-08 62.8 79 53.2
Rhsim11G0007500 Rhododendron simsii HOM05D003683 ORTHO05D004143 2.2e-08 62.4 68 57.4
Lalb_Chr03g0039121 Lupinus albus HOM05D003683 ORTHO05D004143 2.9e-08 62.0 85 48.2
Nitab4.5_0006122g0030 Nicotiana tabacum HOM05D003683 ORTHO05D004143 2.9e-08 62.0 71 52.1
Sp4g27480 Schrenkiella parvula HOM05D003683 ORTHO05D004143 2.9e-08 62.0 75 53.3
Sabra01G0087900 Salix brachista HOM05D003683 ORTHO05D004143 5.0e-08 61.2 69 52.2
AL4G44620 Arabidopsis lyrata HOM05D003683 ORTHO05D004143 6.5e-08 60.8 75 56.0
EL10Ac5g12652 Beta vulgaris HOM05D003683 ORTHO05D004143 6.5e-08 60.8 68 51.5
BcaB02g08997 Brassica carinata HOM05D003683 ORTHO05D004143 6.5e-08 60.8 75 53.3
Gohir.A11G081600 Gossypium hirsutum HOM05D003683 ORTHO05D004143 6.5e-08 60.8 65 53.8
Hund14673 Selenicereus undatus HOM05D003683 ORTHO05D004143 8.5e-08 60.5 68 57.4
Duzib133G0707 Durio zibethinus HOM05D003683 ORTHO05D004143 1.1e-07 60.1 76 48.7
Nitab4.5_0000439g0100 Nicotiana tabacum HOM05D003683 ORTHO05D004143 1.1e-07 60.1 71 49.3
Potri.014G071200 Populus trichocarpa HOM05D003683 ORTHO05D004143 1.1e-07 60.1 69 53.6
A04p33850 Brassica napus HOM05D003683 ORTHO05D004143 1.5e-07 59.7 75 50.7
BraA04t18845Z Brassica rapa HOM05D003683 ORTHO05D004143 1.5e-07 59.7 75 50.7
Glyma.18G221800 Glycine max HOM05D003683 ORTHO05D004143 1.5e-07 59.7 63 54.0
Sed0005281 Sechium edule HOM05D003683 ORTHO05D004143 1.5e-07 59.7 67 49.3
TAR629G0669 Trochodendron aralioides HOM05D003683 ORTHO05D004143 1.5e-07 59.7 67 52.2
TAR629G3017 Trochodendron aralioides HOM05D003683 ORTHO05D004143 1.5e-07 59.7 67 52.2
BcaC01g05122 Brassica carinata HOM05D003683 ORTHO05D004143 1.9e-07 59.3 74 52.7
BcaC01g05135 Brassica carinata HOM05D003683 ORTHO05D004143 1.9e-07 59.3 74 52.7
C03p30100 Brassica napus HOM05D003683 ORTHO05D004143 1.9e-07 59.3 74 52.7
CiPaw.01G260700 Carya illinoinensis HOM05D003683 ORTHO05D004143 1.9e-07 59.3 78 51.3
Gohir.D11G086200 Gossypium hirsutum HOM05D003683 ORTHO05D004143 1.9e-07 59.3 65 52.3
Hma1.2p1_1793F.1_g302590 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 2.5e-07 58.9 78 50.0
Lj3g0025203 Lotus japonicus HOM05D003683 ORTHO05D004143 2.5e-07 58.9 64 53.1
Manes.01G264900 Manihot esculenta HOM05D003683 ORTHO05D004143 2.5e-07 58.9 52 63.5
A03p25230 Brassica napus HOM05D003683 ORTHO05D004143 3.2e-07 58.5 74 52.7
AUR62010534 Chenopodium quinoa HOM05D003683 ORTHO05D004143 3.2e-07 58.5 67 49.3
Glyma.03G022200 Glycine max HOM05D003683 ORTHO05D004143 3.2e-07 58.5 66 54.5
vmacro00217 Vaccinium macrocarpon HOM05D003683 ORTHO05D004143 3.2e-07 58.5 66 56.1
Atru.chr9.1472 Acer truncatum HOM05D003683 ORTHO05D004143 4.2e-07 58.2 73 52.1
Aa31LG1G26950 Aethionema arabicum HOM05D003683 ORTHO05D004143 4.2e-07 58.2 72 52.8
AT2G45450 Arabidopsis thaliana HOM05D003683 ORTHO05D004143 4.2e-07 58.2 75 53.3
BcaB01g03267 Brassica carinata HOM05D003683 ORTHO05D004143 4.2e-07 58.2 74 51.4
BcaC02g07091 Brassica carinata HOM05D003683 ORTHO05D004143 4.2e-07 58.2 75 49.3
C04p71580 Brassica napus HOM05D003683 ORTHO05D004143 4.2e-07 58.2 75 49.3
BolC4t28663H Brassica oleracea HOM05D003683 ORTHO05D004143 4.2e-07 58.2 75 49.3
CsaV3_3G009560 Cucumis sativus L. HOM05D003683 ORTHO05D004143 4.2e-07 58.2 83 50.6
BcaB02g08986 Brassica carinata HOM05D003683 ORTHO05D004143 5.5e-07 57.8 78 51.3
Carub.0004s2806 Capsella rubella HOM05D003683 ORTHO05D004143 5.5e-07 57.8 72 55.6
CiPaw.02G166400 Carya illinoinensis HOM05D003683 ORTHO05D004143 5.5e-07 57.8 79 49.4
AUR62017361 Chenopodium quinoa HOM05D003683 ORTHO05D004143 5.5e-07 57.8 67 47.8
MELO3C006178.2 Cucumis melo HOM05D003683 ORTHO05D004143 5.5e-07 57.8 73 53.4
HanXRQChr09g0246651 Helianthus annuus HOM05D003683 ORTHO05D004143 5.5e-07 57.8 69 44.9
Lsat_1_v5_gn_3_5041 Lactuca sativa HOM05D003683 ORTHO05D004143 5.5e-07 57.8 61 52.5
Medtr7g075120 Medicago truncatula HOM05D003683 ORTHO05D004143 5.5e-07 57.8 82 47.6
Potri.002G149600 Populus trichocarpa HOM05D003683 ORTHO05D004143 5.5e-07 57.8 72 52.8
FAN10G4272 Fragaria x ananassa HOM05D003683 ORTHO05D004143 7.2e-07 57.4 63 55.6
Gohir.A12G102100 Gossypium hirsutum HOM05D003683 ORTHO05D004143 7.2e-07 57.4 61 52.5
Gorai.008G114600 Gossypium raimondii HOM05D003683 ORTHO05D004143 7.2e-07 57.4 61 52.5
Potri.001G114900 Populus trichocarpa HOM05D003683 ORTHO05D004143 7.2e-07 57.4 69 52.2
RcHm_v2.0_Chr1g0350821 Rosa chinensis HOM05D003683 ORTHO05D004143 7.2e-07 57.4 63 57.1
THA.LOC104814010 Tarenaya hassleriana HOM05D003683 ORTHO05D004143 7.2e-07 57.4 67 52.2
BcaB06g29422 Brassica carinata HOM05D003683 ORTHO05D004143 1.2e-06 56.6 62 54.8
Cpa.g.sc29.63 Carica papaya HOM05D003683 ORTHO05D004143 1.2e-06 56.6 46 65.2
FvH4_7g12070 Fragaria vesca HOM05D003683 ORTHO05D004143 1.2e-06 56.6 63 55.6
FAN06G0493 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.2e-06 56.6 63 55.6
FAN06G2934 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.2e-06 56.6 63 55.6
FAN10G1839 Fragaria x ananassa HOM05D003683 ORTHO05D004143 1.2e-06 56.6 63 55.6
Actinidia02072 Actinidia chinensis HOM05D003683 ORTHO05D004143 2.1e-06 55.8 62 56.5
Aqoxy7G00590 Aquilegia oxysepala HOM05D003683 ORTHO05D004143 2.7e-06 55.5 72 48.6
TAR375G1063 Trochodendron aralioides HOM05D003683 ORTHO05D004143 2.7e-06 55.5 78 46.2
Gohir.D12G105300 Gossypium hirsutum HOM05D003683 ORTHO05D004143 4.7e-06 54.7 43 62.8
Sed0003331 Sechium edule HOM05D003683 ORTHO05D004143 4.7e-06 54.7 75 49.3
GSVIVG01027629001 Vitis vinifera HOM05D003683 ORTHO05D004143 4.7e-06 54.7 88 42.0
COL.COLO4_12571 Corchorus olitorius HOM05D003683 ORTHO05D004143 6.1e-06 54.3 79 49.4
Duzib138G1197 Durio zibethinus HOM05D003683 ORTHO05D004143 6.1e-06 54.3 47 57.4
Glyma.01G144700 Glycine max HOM05D003683 ORTHO05D004143 6.1e-06 54.3 44 63.6
Prupe.2G147300 Prunus persica HOM05D003683 ORTHO05D004143 6.1e-06 54.3 46 63.0
Thecc.01G374500 Theobroma cacao HOM05D003683 ORTHO05D004143 6.1e-06 54.3 75 49.3
Peaxi162Scf00021g00139 Petunia axillaris HOM05D003683 ORTHO05D004143 8.0e-06 53.9 60 55.0


User provided reference genes

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