Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G3383 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.4e-195 686.0 336 100.0
SalBow6G6227 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.4e-195 686.0 336 100.0
SalBow6G3389 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.3e-169 599.0 299 98.7
SalBow6G1717 Salvia bowleyana HOM05D005023 ORTHO05D006009 6.7e-169 597.4 299 98.7
SalBow6G6031 Salvia bowleyana HOM05D005023 ORTHO05D006009 6.7e-169 597.4 299 98.7
SalBow6G2872 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.6e-167 592.8 296 99.3
SalBow6G3524 Salvia bowleyana HOM05D005023 ORTHO05D006009 9.9e-165 583.6 292 98.6
SalBow6G4332 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.2e-164 582.4 300 96.3
SalBow6G6846 Salvia bowleyana HOM05D005023 ORTHO05D006009 5.3e-158 561.2 285 97.2
SalBow6G6255 Salvia bowleyana HOM05D005023 ORTHO05D006009 6.9e-158 560.8 285 97.2
SalBow6G4088 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.2e-151 539.3 270 99.3
SalBow8G0269 Salvia bowleyana HOM05D005023 ORTHO05D006009 8.5e-148 527.3 271 97.4
SalBow6G3781 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.9e-140 502.3 249 98.8
SalBow6G0983 Salvia bowleyana HOM05D005023 ORTHO05D006009 6.3e-111 404.8 267 81.3
SalBow6G0969 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.6e-104 382.9 194 99.0
SalBow6G5471 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.9e-94 350.1 180 97.2
SalBow6G6268 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.2e-93 347.4 178 95.5
SalBow6G1311 Salvia bowleyana HOM05D005023 ORTHO05D006009 1.6e-93 347.1 180 96.7
SalBow6G0951 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.0e-88 330.1 162 98.8
Migut.E00780 Erythranthe guttata HOM05D005023 ORTHO05D006009 7.3e-83 311.6 280 57.1
MSTRG.1995 Avicennia marina HOM05D005023 ORTHO05D006009 2.2e-79 300.1 275 58.9
SGA_v2.0_scaffold6G03150 Striga asiatica HOM05D005023 ORTHO05D006009 2.9e-79 299.7 285 55.8
PGSC0003DMG400014810 Solanum tuberosum HOM05D005023 ORTHO05D006009 5.3e-65 252.3 285 46.7
Nitab4.5_0002380g0110 Nicotiana tabacum HOM05D005023 ORTHO05D006009 9.0e-65 251.5 284 46.8
Cc08_g03230 Coffea canephora HOM05D005023 ORTHO05D006009 1.2e-64 251.1 262 48.5
Lj2A234G45 Lonicera japonica HOM05D005023 ORTHO05D006009 2.9e-63 246.5 311 45.3
Solyc08g076570.3 Solanum lycopersicum HOM05D005023 ORTHO05D006009 1.4e-62 244.2 281 45.9
Sopen08g025130 Solanum pennellii HOM05D005023 ORTHO05D006009 1.4e-62 244.2 283 46.3
Dinv28986 Davidia involucrata HOM05D005023 ORTHO05D006009 4.2e-62 242.7 245 51.0
Nitab4.5_0000353g0050 Nicotiana tabacum HOM05D005023 ORTHO05D006009 4.2e-62 242.7 277 46.9
Nitab4.5_0004669g0010 Nicotiana tabacum HOM05D005023 ORTHO05D006009 7.1e-62 241.9 245 49.0
Peaxi162Scf00170g00918 Petunia axillaris HOM05D005023 ORTHO05D006009 1.2e-61 241.1 268 47.8
Nitab4.5_0004839g0010 Nicotiana tabacum HOM05D005023 ORTHO05D006009 6.0e-61 238.8 283 44.2
CSS0008599 Camellia sinensis var. sinensis HOM05D005023 ORTHO05D006009 3.9e-60 236.1 246 49.6
CAN.G298.60 Capsicum annuum HOM05D005023 ORTHO05D006009 5.6e-59 232.3 283 44.9
CAN.G298.61 Capsicum annuum HOM05D005023 ORTHO05D006009 5.6e-59 232.3 283 44.9
CAN.G726.32 Capsicum annuum HOM05D005023 ORTHO05D006009 5.6e-59 232.3 283 44.9
QL12p004398 Quercus lobata HOM05D005023 ORTHO05D006009 1.3e-58 231.1 262 46.6
Actinidia09175 Actinidia chinensis HOM05D005023 ORTHO05D006009 2.1e-58 230.3 292 44.5
Actinidia25987 Actinidia chinensis HOM05D005023 ORTHO05D006009 2.1e-58 230.3 245 49.8
CiPaw.11G096900 Carya illinoinensis HOM05D005023 ORTHO05D006009 8.1e-58 228.4 252 47.6
vmacro00304 Vaccinium macrocarpon HOM05D005023 ORTHO05D006009 3.1e-57 226.5 256 48.8
Hma1.2p1_2161F.1_g315620 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 9.0e-57 224.9 246 49.2
Potri.003G095200 Populus trichocarpa HOM05D005023 ORTHO05D006009 1.5e-56 224.2 299 43.1
Rhsim07G0130800 Rhododendron simsii HOM05D005023 ORTHO05D006009 2.0e-56 223.8 244 50.0
SalBow6G0459 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.0e-56 223.8 106 99.1
Aqoxy1G01584 Aquilegia oxysepala HOM05D005023 ORTHO05D006009 3.4e-56 223.0 243 46.5
PSO170G6706 Papaver somniferum HOM05D005023 ORTHO05D006009 1.7e-55 220.7 258 46.9
Manes.02G223400 Manihot esculenta HOM05D005023 ORTHO05D006009 2.9e-55 219.9 248 48.4
PSO302G0152 Papaver somniferum HOM05D005023 ORTHO05D006009 6.4e-55 218.8 257 47.1
TWI60G0688 Tripterygium wilfordii HOM05D005023 ORTHO05D006009 3.2e-54 216.5 282 42.6
Cfa012488 Carpinus fangiana HOM05D005023 ORTHO05D006009 1.6e-53 214.2 254 42.5
MD06G1038100 Malus domestica HOM05D005023 ORTHO05D006009 1.6e-53 214.2 259 42.9
Lsat_1_v5_gn_6_80180 Lactuca sativa HOM05D005023 ORTHO05D006009 2.1e-53 213.8 280 40.7
Ciclev10016033m.g Citrus clementina HOM05D005023 ORTHO05D006009 1.0e-52 211.5 254 44.9
COL.COLO4_16967 Corchorus olitorius HOM05D005023 ORTHO05D006009 1.0e-52 211.5 249 45.8
RcHm_v2.0_Chr7g0211361 Rosa chinensis HOM05D005023 ORTHO05D006009 1.0e-52 211.5 248 43.5
Phvul.009G009200 Phaseolus vulgaris HOM05D005023 ORTHO05D006009 2.3e-52 210.3 276 42.4
Prupe.5G030700 Prunus persica HOM05D005023 ORTHO05D006009 2.3e-52 210.3 263 43.3
Cpa.g.sc90.15 Carica papaya HOM05D005023 ORTHO05D006009 3.0e-52 209.9 257 44.0
PSO782G3892 Papaver somniferum HOM05D005023 ORTHO05D006009 5.1e-52 209.1 244 45.9
Thecc.03G307500 Theobroma cacao HOM05D005023 ORTHO05D006009 8.7e-52 208.4 243 46.9
PGR042G2438 Punica granatum HOM05D005023 ORTHO05D006009 1.5e-51 207.6 240 45.8
DCAR_031128 Daucus carota HOM05D005023 ORTHO05D006009 1.9e-51 207.2 258 43.0
FvH4_5g22760 Fragaria vesca HOM05D005023 ORTHO05D006009 1.9e-51 207.2 248 42.3
FAN18G3597 Fragaria x ananassa HOM05D005023 ORTHO05D006009 1.9e-51 207.2 248 42.3
GSVIVG01013101001 Vitis vinifera HOM05D005023 ORTHO05D006009 1.9e-51 207.2 247 45.3
FAN08G0704 Fragaria x ananassa HOM05D005023 ORTHO05D006009 3.3e-51 206.5 248 42.3
FAN13G2198 Fragaria x ananassa HOM05D005023 ORTHO05D006009 5.6e-51 205.7 248 42.3
FAN13G2978 Fragaria x ananassa HOM05D005023 ORTHO05D006009 5.6e-51 205.7 248 42.3
Duzib084G0965 Durio zibethinus HOM05D005023 ORTHO05D006009 7.4e-51 205.3 273 41.8
Atru.chr12.846 Acer truncatum HOM05D005023 ORTHO05D006009 9.6e-51 204.9 249 44.2
FAN18G4268 Fragaria x ananassa HOM05D005023 ORTHO05D006009 9.6e-51 204.9 248 41.9
Glyma.06G013600 Glycine max HOM05D005023 ORTHO05D006009 1.4e-49 201.1 246 43.5
Lj6g0028231 Lotus japonicus HOM05D005023 ORTHO05D006009 1.8e-49 200.7 246 43.5
Ca_22661_v3 Cicer arietinum L. HOM05D005023 ORTHO05D006009 3.1e-49 199.9 263 42.2
Lalb_Chr25g0286701 Lupinus albus HOM05D005023 ORTHO05D006009 5.3e-49 199.1 245 43.3
TPR.G14159 Trifolium pratense HOM05D005023 ORTHO05D006009 6.9e-49 198.7 252 44.4
Hund11209 Selenicereus undatus HOM05D005023 ORTHO05D006009 9.0e-49 198.4 252 43.3
Sabra01G0107600 Salix brachista HOM05D005023 ORTHO05D006009 1.2e-48 198.0 262 45.0
Aa31sc182G50 Aethionema arabicum HOM05D005023 ORTHO05D006009 2.6e-48 196.8 247 47.0
unitig_21.g20893 Utricularia gibba HOM05D005023 ORTHO05D004745 2.6e-48 196.8 237 45.6
Haze_08177 Corylus avellana HOM05D005023 ORTHO05D006009 4.5e-48 196.1 199 49.2
ECA240G3323 Erigeron canadensis HOM05D005023 ORTHO05D006009 4.5e-48 196.1 244 42.2
Glyma.04G013700 Glycine max HOM05D005023 ORTHO05D006009 1.0e-47 194.9 275 41.1
AL8G11450 Arabidopsis lyrata HOM05D005023 ORTHO05D006009 1.7e-47 194.1 248 47.6
Psat4g122280 Pisum sativum HOM05D005023 ORTHO05D006009 1.7e-47 194.1 245 44.5
Psat4g122680 Pisum sativum HOM05D005023 ORTHO05D006009 2.9e-47 193.4 224 44.6
Sp2g11650 Schrenkiella parvula HOM05D005023 ORTHO05D006009 2.9e-47 193.4 248 46.8
Carub.0008s0106 Capsella rubella HOM05D005023 ORTHO05D006009 3.8e-47 193.0 277 44.8
AT5G46850 Arabidopsis thaliana HOM05D005023 ORTHO05D006009 4.9e-47 192.6 249 45.4
Medtr8g066330 Medicago truncatula HOM05D005023 ORTHO05D006009 6.5e-47 192.2 254 42.5
Eucgr.E00250 Eucalyptus grandis HOM05D005023 ORTHO05D006009 8.4e-47 191.8 273 40.3
EL10Ac8g19220 Beta vulgaris HOM05D005023 ORTHO05D006009 1.9e-46 190.7 252 41.7
AUR62033976 Chenopodium quinoa HOM05D005023 ORTHO05D006009 3.2e-46 189.9 261 42.9
CARHR174600 Cardamine hirsuta HOM05D005023 ORTHO05D006009 5.5e-46 189.1 248 44.4
CsaV3_1G033210 Cucumis sativus L. HOM05D000021 ORTHO05D000010 5.5e-46 189.1 298 36.9
CANSAT54G0648 Cannabis sativa HOM05D005023 ORTHO05D006009 7.1e-46 188.7 255 40.4
ClCG04G001320 Citrullus lanatus HOM05D005023 ORTHO05D006009 7.1e-46 188.7 271 40.2
Gohir.A12G206900 Gossypium hirsutum HOM05D005023 ORTHO05D006009 2.1e-45 187.2 245 43.3
Sabra03G0064200 Salix brachista HOM05D005023 ORTHO05D006009 2.7e-45 186.8 217 45.6
Sed0002054 Sechium edule HOM05D005023 ORTHO05D006009 2.7e-45 186.8 272 39.0
Thhalv10000976m.g Eutrema salsugineum HOM05D005023 ORTHO05D006009 3.5e-45 186.4 280 42.5
FAN04G1126 Fragaria x ananassa HOM05D005023 ORTHO05D006009 6.0e-45 185.7 191 47.6
arahy.Tifrunner.gnm1.ann1.NK2KWA Arachis hypogaea HOM05D005023 ORTHO05D006009 1.0e-44 184.9 246 40.2
Gohir.D12G209350 Gossypium hirsutum HOM05D005023 ORTHO05D006009 1.0e-44 184.9 276 39.5
Gorai.008G224900 Gossypium raimondii HOM05D005023 ORTHO05D006009 1.0e-44 184.9 245 42.9
arahy.Tifrunner.gnm1.ann1.6CH5L4 Arachis hypogaea HOM05D005023 ORTHO05D006009 1.3e-44 184.5 246 40.2
HanXRQChr03g0083581 Helianthus annuus HOM05D005023 ORTHO05D006009 1.3e-44 184.5 238 39.5
A06p45570 Brassica napus HOM05D005023 ORTHO05D006009 1.8e-44 184.1 269 42.4
BraA06t27429Z Brassica rapa HOM05D005023 ORTHO05D006009 1.8e-44 184.1 269 42.4
THA.LOC104806696 Tarenaya hassleriana HOM05D005023 ORTHO05D006009 1.8e-44 184.1 246 43.9
arahy.Tifrunner.gnm1.ann1.J93PEP Arachis hypogaea HOM05D005023 ORTHO05D006009 3.9e-44 183.0 248 39.9
MBI02_g28332_MAGBIO Magnolia biondii HOM05D005023 ORTHO05D006009 8.7e-44 181.8 247 40.9
BcaC06g31439 Brassica carinata HOM05D005023 ORTHO05D006009 4.3e-43 179.5 244 43.4
Ah.12g065340 Amaranthus hybridus HOM05D005023 ORTHO05D006009 4.8e-42 176.0 247 42.1
BcaC06g34337 Brassica carinata HOM05D005023 ORTHO05D006009 4.8e-42 176.0 271 41.7
C07p30210 Brassica napus HOM05D005023 ORTHO05D006009 4.8e-42 176.0 271 41.7
BolC7t43557H Brassica oleracea HOM05D005023 ORTHO05D006009 4.8e-42 176.0 271 42.1
SalBow6G7173 Salvia bowleyana HOM05D005023 ORTHO05D006009 7.6e-40 168.7 81 97.5
SHI20240 Sapria himalayana HOM05D000452 ORTHO05D000647 7.6e-40 168.7 247 41.3
PSO063G5178 Papaver somniferum HOM05D005023 ORTHO05D006009 1.0e-39 168.3 166 51.8
Hma1.2p1_1594F.1_g292650 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 2.9e-39 166.8 163 52.1
Nn7g38116 Nelumbo nucifera HOM05D005023 ORTHO05D006009 3.2e-38 163.3 244 35.7
TPR.G3350 Trifolium pratense HOM05D005023 ORTHO05D006009 3.5e-37 159.8 189 45.0
CDE02G4581 Ceratophyllum demersum HOM05D005023 ORTHO05D006009 4.6e-37 159.5 260 37.3
Hma1.2p1_2161F.1_g315630 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 7.9e-37 158.7 195 44.6
Sc01g0007280 Simmondsia chinensis HOM05D005023 ORTHO05D006009 4.3e-35 152.9 244 36.1
arahy.Tifrunner.gnm1.ann1.GAHP45 Arachis hypogaea HOM05D005023 ORTHO05D006009 2.4e-33 147.1 242 35.1
Zm00001eb030880 Zea mays HOM05D005023 ORTHO05D006009 4.1e-33 146.4 216 41.2
ATR0580G166 Amborella trichopoda HOM05D005237 ORTHO05D006189 1.5e-32 144.4 192 41.7
Os12g0596900 Oryza sativa ssp. japonica HOM05D005023 ORTHO05D006009 7.7e-32 142.1 246 37.0
MELO3C033076.2 Cucumis melo HOM05D005023 ORTHO05D006009 1.0e-31 141.7 235 36.6
Solyc08g076550.3 Solanum lycopersicum HOM05D005023 ORTHO05D006009 1.7e-31 141.0 137 50.4
HPP92_014897 Vanilla planifolia HOM05D005023 ORTHO05D006009 1.1e-30 138.3 240 37.1
HPP92_014902 Vanilla planifolia HOM05D005023 ORTHO05D006009 1.1e-30 138.3 239 37.7
Actinidia09177 Actinidia chinensis HOM05D005023 ORTHO05D006009 3.0e-28 130.2 244 34.0
Hma1.2p1_0572F.1_g181170 Hydrangea macrophylla HOM05D005023 ORTHO05D006009 1.8e-25 120.9 125 52.0
SalBow6G3463 Salvia bowleyana HOM05D005023 ORTHO05D006009 2.7e-21 107.1 57 89.5
Mapoly0088s0063 Marchantia polymorpha HOM05D005023 ORTHO05D006009 1.8e-20 104.4 202 31.2
SMO358G0075 Selaginella moellendorffii HOM05D005023 ORTHO05D006009 3.9e-20 103.2 211 30.3
TAR375G0008 Trochodendron aralioides HOM05D005023 ORTHO05D006009 3.7e-18 96.7 215 32.1
MELO3C011047.2 Cucumis melo HOM05D005023 ORTHO05D006009 9.1e-17 92.0 96 46.9
Pp3c13_7870 Physcomitrium patens HOM05D005023 ORTHO05D006009 1.5e-16 91.3 211 27.0
AagrBONN_evm.TU.Sc2ySwM_344.1294 Anthoceros agrestis HOM05D005023 ORTHO05D006009 5.7e-11 72.8 147 32.7
SalBow6G6915 Salvia bowleyana HOM05D009024 ORTHO05D353423 6.3e-10 69.3 30 96.7
CSS0036970 Camellia sinensis var. sinensis HOM05D005023 ORTHO05D006009 5.9e-08 62.8 83 43.4


User provided reference genes

Program Settings