Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G5988 Salvia bowleyana HOM05D000834 ORTHO05D006956 2.2e-207 725.3 355 100.0
SalBow4G1359 Salvia bowleyana HOM05D000834 ORTHO05D006956 1.1e-137 493.8 346 74.6
SGA_v2.0_scaffold1G00665 Striga asiatica HOM05D000121 ORTHO05D000102 1.3e-133 480.3 349 71.9
Migut.D00483 Erythranthe guttata HOM05D000834 ORTHO05D006956 4.8e-133 478.4 343 72.6
GSVIVG01028438001 Vitis vinifera HOM05D000834 ORTHO05D006956 6.9e-132 474.6 343 72.0
Lj1C74T17 Lonicera japonica HOM05D000834 ORTHO05D006956 2.0e-131 473.0 343 72.3
Actinidia09509 Actinidia chinensis HOM05D000834 ORTHO05D006956 1.3e-130 470.3 343 72.9
MSTRG.18357 Avicennia marina HOM05D000834 ORTHO05D006956 1.1e-129 467.2 343 70.3
arahy.Tifrunner.gnm1.ann1.WYWU3M Arachis hypogaea HOM05D000834 ORTHO05D006956 2.4e-129 466.1 343 70.6
Sabra02G0194500 Salix brachista HOM05D000834 ORTHO05D006956 4.2e-129 465.3 343 71.1
CSS0050145 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 7.1e-129 464.5 343 71.4
arahy.Tifrunner.gnm1.ann1.G250MW Arachis hypogaea HOM05D000834 ORTHO05D006956 9.3e-129 464.2 343 70.3
Potri.002G255900 Populus trichocarpa HOM05D000834 ORTHO05D006956 2.1e-128 463.0 343 70.6
Oeu052085.1 Olea europaea HOM05D000834 ORTHO05D006956 2.3e-127 459.5 343 71.4
Haze_24714 Corylus avellana HOM05D000834 ORTHO05D006956 3.0e-127 459.1 343 69.7
CSS0037788 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 6.7e-127 458.0 348 70.4
Cc01_g17740 Coffea canephora HOM05D000834 ORTHO05D006956 8.7e-127 457.6 346 68.8
Potri.014G193300 Populus trichocarpa HOM05D000834 ORTHO05D006956 1.9e-126 456.4 343 70.0
Prupe.8G214700 Prunus persica HOM05D000834 ORTHO05D006956 1.9e-126 456.4 343 69.1
Cfa002491 Carpinus fangiana HOM05D000834 ORTHO05D006956 2.5e-126 456.1 343 69.4
Manes.13G039100 Manihot esculenta HOM05D000834 ORTHO05D006956 2.5e-126 456.1 342 71.6
Sc05g0002850 Simmondsia chinensis HOM05D000834 ORTHO05D006956 2.5e-126 456.1 346 68.8
Hund05490 Selenicereus undatus HOM05D000834 ORTHO05D006956 5.6e-126 454.9 346 68.8
Lsat_1_v5_gn_5_181100 Lactuca sativa HOM05D000834 ORTHO05D006956 9.6e-126 454.1 343 68.8
HanXRQChr01g0014941 Helianthus annuus HOM05D000834 ORTHO05D006956 1.3e-125 453.8 343 68.8
Rhsim01G0259900 Rhododendron simsii HOM05D000834 ORTHO05D006956 1.3e-125 453.8 366 66.7
CiPaw.03G271600 Carya illinoinensis HOM05D000834 ORTHO05D006956 1.6e-125 453.4 343 68.8
Lj5g0006902 Lotus japonicus HOM05D000834 ORTHO05D006956 2.8e-125 452.6 350 67.7
TWI12G0869 Tripterygium wilfordii HOM05D000834 ORTHO05D006956 3.7e-125 452.2 343 70.3
Gorai.007G150200 Gossypium raimondii HOM05D000834 ORTHO05D006956 6.2e-125 451.4 344 70.3
Gohir.D11G140000 Gossypium hirsutum HOM05D000834 ORTHO05D006956 3.1e-124 449.1 344 70.3
MD10G1175400 Malus domestica HOM05D000834 ORTHO05D006956 4.0e-124 448.7 343 68.2
MD05G1187700 Malus domestica HOM05D000834 ORTHO05D006956 5.3e-124 448.4 343 67.9
Phvul.007G153700 Phaseolus vulgaris HOM05D000834 ORTHO05D006956 5.3e-124 448.4 343 67.9
Nn1g03003 Nelumbo nucifera HOM05D000834 ORTHO05D006956 6.9e-124 448.0 355 68.7
Gohir.A11G133900 Gossypium hirsutum HOM05D000834 ORTHO05D006956 9.0e-124 447.6 344 70.1
Duzib138G0050 Durio zibethinus HOM05D000834 ORTHO05D006956 1.2e-123 447.2 344 70.1
Nitab4.5_0002435g0060 Nicotiana tabacum HOM05D000834 ORTHO05D006956 1.2e-123 447.2 346 67.6
PGR044G1351 Punica granatum HOM05D000834 ORTHO05D006956 1.2e-123 447.2 343 69.4
Glyma.13G127400 Glycine max HOM05D000834 ORTHO05D006956 1.5e-123 446.8 343 67.9
VMungo0720G2048 Vigna mungo HOM05D000834 ORTHO05D006956 1.5e-123 446.8 343 67.6
RcHm_v2.0_Chr6g0286481 Rosa chinensis HOM05D000834 ORTHO05D006956 2.0e-123 446.4 343 67.6
Manes.12G038400 Manihot esculenta HOM05D000834 ORTHO05D006956 2.6e-123 446.0 342 70.2
TPR.G5902 Trifolium pratense HOM05D000834 ORTHO05D006956 2.6e-123 446.0 343 67.9
PSO832G2974 Papaver somniferum HOM05D000834 ORTHO05D006956 3.4e-123 445.7 347 67.4
Nitab4.5_0000385g0020 Nicotiana tabacum HOM05D000834 ORTHO05D006956 9.9e-123 444.1 343 67.6
AUR62025434 Chenopodium quinoa HOM05D000834 ORTHO05D006956 1.7e-122 443.4 350 66.9
Aa31LG8G17350 Aethionema arabicum HOM05D000834 ORTHO05D006956 2.9e-122 442.6 345 68.1
PSO764G0197 Papaver somniferum HOM05D000834 ORTHO05D006956 2.9e-122 442.6 347 67.1
DCAR_004694 Daucus carota HOM05D000834 ORTHO05D006956 6.4e-122 441.4 343 66.2
FvH4_2g20370 Fragaria vesca HOM05D000834 ORTHO05D006956 8.4e-122 441.0 343 67.3
THA.LOC104814534 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 8.4e-122 441.0 349 67.0
Medtr1g069455 Medicago truncatula HOM05D000834 ORTHO05D006956 1.1e-121 440.7 343 66.8
Thecc.01G249300 Theobroma cacao HOM05D000834 ORTHO05D006956 1.1e-121 440.7 344 68.9
FAN15G3585 Fragaria x ananassa HOM05D000834 ORTHO05D006956 1.9e-121 439.9 343 67.1
Lalb_Chr02g0152761 Lupinus albus HOM05D000834 ORTHO05D006956 1.9e-121 439.9 344 67.2
Sed0018887 Sechium edule HOM05D000834 ORTHO05D006956 2.5e-121 439.5 343 65.6
TAR362G0351 Trochodendron aralioides HOM05D000834 ORTHO05D006956 2.5e-121 439.5 350 67.1
MBI07_g22384_MAGBIO Magnolia biondii HOM05D000834 ORTHO05D006956 4.2e-121 438.7 355 66.8
FAN24G3261 Fragaria x ananassa HOM05D000834 ORTHO05D006956 2.1e-120 436.4 344 67.4
Sp3g33600 Schrenkiella parvula HOM05D000834 ORTHO05D006956 2.7e-120 436.0 345 66.4
CsaV3_6G007320 Cucumis sativus L. HOM05D000834 ORTHO05D006956 4.6e-120 435.3 344 65.1
FAN27G0744 Fragaria x ananassa HOM05D000834 ORTHO05D006956 6.0e-120 434.9 343 66.2
ClCG06G001380 Citrullus lanatus HOM05D000834 ORTHO05D006956 7.9e-120 434.5 343 65.6
THA.LOC104820067 Tarenaya hassleriana HOM05D000834 ORTHO05D006956 7.9e-120 434.5 348 67.2
ECA248G1156 Erigeron canadensis HOM05D000121 ORTHO05D000102 1.0e-119 434.1 322 69.6
Eucgr.K01422 Eucalyptus grandis HOM05D000834 ORTHO05D006956 1.0e-119 434.1 343 65.9
CANSAT01G0496 Cannabis sativa HOM05D000834 ORTHO05D006956 2.3e-119 433.0 344 65.4
CANSAT01G1591 Cannabis sativa HOM05D000834 ORTHO05D006956 2.3e-119 433.0 344 65.4
CDE02G1088 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 2.3e-119 433.0 346 67.3
QL09p041638 Quercus lobata HOM05D000834 ORTHO05D006956 3.9e-119 432.2 346 66.2
Carub.0003s3474 Capsella rubella HOM05D000834 ORTHO05D006956 5.1e-119 431.8 348 64.7
AL3G53320 Arabidopsis lyrata HOM05D000834 ORTHO05D006956 6.7e-119 431.4 345 65.5
BcaB07g31592 Brassica carinata HOM05D000834 ORTHO05D006956 6.7e-119 431.4 345 65.8
CDE09G1390 Ceratophyllum demersum HOM05D000834 ORTHO05D006956 6.7e-119 431.4 323 69.7
AT2G20360 Arabidopsis thaliana HOM05D000834 ORTHO05D006956 2.5e-118 429.5 345 65.2
BraA07t27827Z Brassica rapa HOM05D000834 ORTHO05D006956 2.5e-118 429.5 345 66.1
Psat6g062480 Pisum sativum HOM05D000834 ORTHO05D006956 2.5e-118 429.5 343 66.2
unitig_22.g6307 Utricularia gibba HOM05D000834 ORTHO05D006956 2.5e-118 429.5 356 66.0
BraA09t41279Z Brassica rapa HOM05D000834 ORTHO05D006956 3.3e-118 429.1 345 66.1
C07p00720 Brassica napus HOM05D000834 ORTHO05D006956 4.3e-118 428.7 323 68.1
CARHR110880 Cardamine hirsuta HOM05D000834 ORTHO05D006956 4.3e-118 428.7 345 65.2
A07p00360 Brassica napus HOM05D000834 ORTHO05D000909 5.6e-118 428.3 323 68.1
COL.COLO4_02902 Corchorus olitorius HOM05D000834 ORTHO05D006956 5.6e-118 428.3 344 67.7
BraA09t36931Z Brassica rapa HOM05D000834 ORTHO05D006956 7.4e-118 427.9 345 65.5
BcaC04g22796 Brassica carinata HOM05D000834 ORTHO05D006956 9.6e-118 427.6 345 65.5
A09p12840 Brassica napus HOM05D000834 ORTHO05D006956 9.6e-118 427.6 323 67.8
BolC9t54430H Brassica oleracea HOM05D000834 ORTHO05D006956 9.6e-118 427.6 345 65.5
CAN.G536.3 Capsicum annuum HOM05D000834 ORTHO05D006956 9.6e-118 427.6 345 65.2
Atru.chr5.1869 Acer truncatum HOM05D000834 ORTHO05D006956 1.3e-117 427.2 344 64.5
Sopen09g025590 Solanum pennellii HOM05D000834 ORTHO05D006956 1.6e-117 426.8 356 63.8
C08p42260 Brassica napus HOM05D000834 ORTHO05D006956 2.1e-117 426.4 324 68.2
Ciclev10020464m.g Citrus clementina HOM05D000834 ORTHO05D006956 2.1e-117 426.4 344 64.8
BcaC06g36723 Brassica carinata HOM05D000834 ORTHO05D006956 3.7e-117 425.6 345 65.5
ATR0787G052 Amborella trichopoda HOM05D000834 ORTHO05D006956 4.8e-117 425.2 308 72.1
BcaC07g41219 Brassica carinata HOM05D000834 ORTHO05D006956 4.8e-117 425.2 347 66.0
Cpa.g.sc87.39 Carica papaya HOM05D000834 ORTHO05D006956 4.8e-117 425.2 375 62.9
BolC7t40517H Brassica oleracea HOM05D000834 ORTHO05D006956 6.2e-117 424.9 323 67.5
BolC8t51785H Brassica oleracea HOM05D000834 ORTHO05D006956 8.2e-117 424.5 324 67.9
BcaB08g34904 Brassica carinata HOM05D000834 ORTHO05D006956 1.1e-116 424.1 343 65.9
Solyc09g064450.3 Solanum lycopersicum HOM05D000834 ORTHO05D006956 1.1e-116 424.1 356 63.2
A09p58940 Brassica napus HOM05D000834 ORTHO05D006956 1.4e-116 423.7 324 67.9
Peaxi162Scf00043g00251 Petunia axillaris HOM05D000834 ORTHO05D006956 1.4e-116 423.7 338 66.0
Lalb_Chr06g0170741 Lupinus albus HOM05D000834 ORTHO05D006956 1.8e-116 423.3 344 65.1
Aqoxy5G00122 Aquilegia oxysepala HOM05D000834 ORTHO05D006956 2.4e-116 422.9 342 64.9
C09p15230 Brassica napus HOM05D000834 ORTHO05D006956 9.0e-116 421.0 323 66.9
MELO3C022394.2 Cucumis melo HOM05D000834 ORTHO05D006956 9.0e-116 421.0 354 62.4
Thhalv10002002m.g Eutrema salsugineum HOM05D000834 ORTHO05D006956 1.2e-115 420.6 322 67.4
Ah.08g213640 Amaranthus hybridus HOM05D000834 ORTHO05D006956 2.9e-114 416.0 308 70.8
HPP92_020769 Vanilla planifolia HOM05D000834 ORTHO05D006956 1.6e-112 410.2 346 63.0
vmacro14792 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 3.9e-111 405.6 495 50.3
Os02g0816800 Oryza sativa ssp. japonica HOM05D000834 ORTHO05D006956 5.7e-110 401.7 314 66.9
BcaB03g16828 Brassica carinata HOM05D000834 ORTHO05D006956 7.4e-110 401.4 319 66.8
SEGI_11456 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 4.8e-109 398.7 331 63.4
CSS0005533 Camellia sinensis var. sinensis HOM05D000834 ORTHO05D006956 1.8e-108 396.7 402 58.5
Ca_09644_v3 Cicer arietinum L. HOM05D000834 ORTHO05D006956 1.2e-107 394.0 342 61.4
AUR62008805 Chenopodium quinoa HOM05D000834 ORTHO05D006956 1.0e-106 391.0 234 80.8
Dinv19263 Davidia involucrata HOM05D000834 ORTHO05D006956 6.7e-103 378.3 206 87.4
Zm00001eb258880 Zea mays HOM05D000834 ORTHO05D006956 6.5e-98 361.7 327 61.2
Actinidia23703 Actinidia chinensis HOM05D000834 ORTHO05D006956 3.5e-83 312.8 261 68.2
Pp3c14_9070 Physcomitrium patens HOM05D000834 ORTHO05D006956 1.0e-79 301.2 312 47.8
Mapoly0051s0097 Marchantia polymorpha HOM05D000834 ORTHO05D006956 4.0e-79 299.3 309 49.5
AagrBONN_evm.TU.Sc2ySwM_368.182 Anthoceros agrestis HOM05D000834 ORTHO05D006956 2.0e-75 287.0 226 58.8
CBR_g12802 Chara braunii HOM05D000834 ORTHO05D006956 1.0e-66 258.1 227 51.5
SMO119G0351 Selaginella moellendorffii HOM05D000834 ORTHO05D006956 8.6e-66 255.0 229 52.8
Pp3c1_35920 Physcomitrium patens HOM05D000834 ORTHO05D006956 1.2e-64 251.1 204 54.4
Dinv43064 Davidia involucrata HOM05D000834 ORTHO05D006956 1.5e-62 244.2 229 60.3
SHI26743 Sapria himalayana HOM05D000834 ORTHO05D006956 3.6e-48 196.4 242 49.6
MCO13G055 Micromonas commoda HOM05D000834 ORTHO05D006956 4.7e-48 196.1 230 43.5
MD15G1374200 Malus domestica HOM05D000834 ORTHO05D006956 5.8e-46 189.1 140 68.6
PRCOL_00005891 Prasinoderma coloniale HOM05D000834 ORTHO05D006956 8.1e-40 168.7 337 32.3
SEGI_20632 Sequoiadendron giganteum HOM05D000834 ORTHO05D006956 1.8e-39 167.5 172 56.4
Oeu015439.4 Olea europaea HOM05D000121 ORTHO05D000102 2.3e-39 167.2 295 40.0
Cre10.g434450 Chlamydomonas reinhardtii HOM05D000834 ORTHO05D006956 1.5e-38 164.5 214 39.3
Gohir.A13G077301 Gossypium hirsutum HOM05D000834 ORTHO05D006956 4.3e-33 146.4 86 84.9
vmacro08769 Vaccinium macrocarpon HOM05D000834 ORTHO05D006956 4.7e-32 142.9 137 59.9
Gohir.A12G044900 Gossypium hirsutum HOM05D000751 ORTHO05D000889 6.2e-32 142.5 80 86.2
Gohir.A01G059200 Gossypium hirsutum HOM05D000751 ORTHO05D000889 1.4e-31 141.4 83 84.3
vmacro08768 Vaccinium macrocarpon HOM05D000834 ORTHO05D426596 3.8e-21 106.7 65 73.8
Lsat_1_v5_gn_8_148040 Lactuca sativa HOM05D000834 ORTHO05D006956 7.9e-11 72.4 53 64.2
CiPaw.05G147100 Carya illinoinensis HOM05D000834 ORTHO05D006956 5.6e-09 66.2 43 76.7
Lsat_1_v5_gn_7_90061 Lactuca sativa HOM05D000834 ORTHO05D001119 1.4e-07 61.6 36 77.8
arahy.Tifrunner.gnm1.ann1.1Z9DBD Arachis hypogaea HOM05D000380 ORTHO05D002061 4.5e-06 56.6 57 50.9


User provided reference genes

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