Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 7.5e-37 156.8 84 100.0
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 2.0e-21 105.5 74 73.0
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 2.0e-21 105.5 82 70.7
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 3.7e-20 101.3 84 65.5
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.4e-19 99.4 84 60.7
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 1.4e-19 99.4 84 60.7
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 2.4e-19 98.6 78 64.1
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 2.4e-19 98.6 70 70.0
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 4.1e-19 97.8 78 62.8
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 4.1e-19 97.8 84 59.5
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 7.1e-19 97.1 78 64.1
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 9.2e-19 96.7 74 67.6
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 2.7e-18 95.1 70 67.1
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 3.5e-18 94.7 82 59.8
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 3.5e-18 94.7 73 64.4
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 6.0e-18 94.0 71 67.6
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 7.8e-18 93.6 82 62.2
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 7.8e-18 93.6 78 61.5
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 7.8e-18 93.6 79 59.5
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 1.0e-17 93.2 74 62.2
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 1.3e-17 92.8 77 62.3
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 1.3e-17 92.8 82 58.5
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 1.7e-17 92.4 78 62.8
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 2.3e-17 92.0 77 61.0
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.3e-17 92.0 72 62.5
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 2.3e-17 92.0 78 62.8
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 3.0e-17 91.7 78 59.0
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 5.1e-17 90.9 78 60.3
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 6.6e-17 90.5 72 59.7
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 8.6e-17 90.1 82 57.3
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 8.6e-17 90.1 77 58.4
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 1.1e-16 89.7 78 60.3
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 1.5e-16 89.4 71 62.0
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.5e-16 89.4 73 63.0
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.5e-16 89.4 73 63.0
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 1.5e-16 89.4 75 60.0
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 1.5e-16 89.4 72 61.1
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 1.9e-16 89.0 82 57.3
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 1.9e-16 89.0 78 57.7
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 2.5e-16 88.6 82 56.1
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.5e-16 88.6 82 56.1
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 3.3e-16 88.2 77 59.7
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 4.3e-16 87.8 78 56.4
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 4.3e-16 87.8 78 57.7
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 5.6e-16 87.4 67 62.7
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 5.6e-16 87.4 71 62.0
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 5.6e-16 87.4 71 60.6
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 5.6e-16 87.4 78 56.4
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 7.3e-16 87.0 63 69.8
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 7.3e-16 87.0 78 55.1
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 9.5e-16 86.7 78 56.4
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 9.5e-16 86.7 76 57.9
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.2e-15 86.3 77 57.1
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 1.2e-15 86.3 67 61.2
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 1.6e-15 85.9 80 57.5
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.1e-15 85.5 71 60.6
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 2.1e-15 85.5 82 53.7
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 2.8e-15 85.1 71 60.6
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 3.6e-15 84.7 72 56.9
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 3.6e-15 84.7 82 53.7
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 6.2e-15 84.0 77 55.8
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 8.1e-15 83.6 82 52.4
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 8.1e-15 83.6 77 59.7
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.4e-14 82.8 65 61.5
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 2.4e-14 82.0 64 65.6
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 3.1e-14 81.6 70 58.6
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 3.1e-14 81.6 83 51.8
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 4.0e-14 81.3 80 51.2
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 5.2e-14 80.9 78 52.6
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 6.8e-14 80.5 61 63.9
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 6.8e-14 80.5 64 60.9
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 6.8e-14 80.5 71 57.7
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 2.6e-13 78.6 63 61.9
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 5.8e-13 77.4 65 60.0
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 7.6e-13 77.0 64 59.4
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 3.8e-12 74.7 71 52.1
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 4.9e-12 74.3 67 55.2
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 1.9e-11 72.4 76 50.0
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 3.2e-11 71.6 77 54.5
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.2e-11 71.6 69 50.7
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 7.1e-11 70.5 71 49.3
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 7.1e-11 70.5 76 47.4
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 2.1e-10 68.9 68 50.0
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 2.1e-10 68.9 68 51.5
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 2.1e-10 68.9 68 51.5
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 2.1e-10 68.9 68 51.5
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 2.1e-10 68.9 68 51.5
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 2.1e-10 68.9 68 51.5
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 2.1e-10 68.9 79 45.6
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 2.1e-10 68.9 79 48.1
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 2.7e-10 68.6 68 50.0
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 4.6e-10 67.8 68 48.5
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 4.6e-10 67.8 68 51.5
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 4.6e-10 67.8 61 52.5
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 1.0e-09 66.6 71 49.3
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 1.7e-09 65.9 79 46.8
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 5.1e-09 64.3 53 56.6
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 8.7e-09 63.5 58 51.7
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 1.5e-08 62.8 42 73.8
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 7.3e-08 60.5 41 70.7
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 9.6e-08 60.1 72 50.0
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 8.1e-07 57.0 42 66.7
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 1.1e-06 56.6 53 52.8
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 1.4e-06 56.2 40 67.5


User provided reference genes

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