Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G5719 Salvia bowleyana HOM05D007814 ORTHO05D009902 1.7e-202 709.1 367 100.0
MSTRG.18850 Avicennia marina HOM05D007814 ORTHO05D009902 2.1e-139 499.6 370 71.4
Migut.D02523 Erythranthe guttata HOM05D007814 ORTHO05D009902 1.6e-136 490.0 370 70.5
Oeu022249.1 Olea europaea HOM05D007814 ORTHO05D009902 1.8e-127 459.9 369 66.9
Sopen09g023730 Solanum pennellii HOM05D007814 ORTHO05D009902 2.8e-120 436.0 323 69.3
Solyc09g060100.3 Solanum lycopersicum HOM05D007814 ORTHO05D009902 6.2e-120 434.9 323 69.0
Nitab4.5_0003758g0030 Nicotiana tabacum HOM05D007814 ORTHO05D009902 5.3e-119 431.8 369 63.4
Nitab4.5_0000045g0290 Nicotiana tabacum HOM05D007814 ORTHO05D009902 2.0e-118 429.9 367 63.5
Peaxi162Scf00107g02025 Petunia axillaris HOM05D007814 ORTHO05D009902 1.7e-117 426.8 367 59.7
EL10Ac7g17844 Beta vulgaris HOM05D007814 ORTHO05D009902 7.9e-115 417.9 384 62.0
FvH4_2g19010 Fragaria vesca HOM05D007814 ORTHO05D009902 1.3e-114 417.2 310 68.1
ECA236G4680 Erigeron canadensis HOM05D007814 ORTHO05D009902 8.7e-114 414.5 318 68.6
AUR62001086 Chenopodium quinoa HOM05D007814 ORTHO05D009902 1.5e-113 413.7 279 74.6
TWI75G1564 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 1.5e-113 413.7 341 61.6
Gorai.004G058700 Gossypium raimondii HOM05D007814 ORTHO05D009902 2.5e-113 412.9 277 72.2
Prupe.8G202300 Prunus persica HOM05D007814 ORTHO05D009902 3.3e-113 412.5 386 59.3
THA.LOC104809110 Tarenaya hassleriana HOM05D007814 ORTHO05D009902 3.3e-113 412.5 374 62.3
QL09p054446 Quercus lobata HOM05D007814 ORTHO05D009902 4.3e-113 412.1 273 74.7
Gohir.D08G057500 Gossypium hirsutum HOM05D007814 ORTHO05D009902 1.6e-112 410.2 293 68.6
COL.COLO4_15688 Corchorus olitorius HOM05D007814 ORTHO05D009902 2.1e-112 409.8 372 60.2
Lsat_1_v5_gn_8_89880 Lactuca sativa HOM05D007814 ORTHO05D009902 2.1e-112 409.8 385 58.4
CANSAT01G1281 Cannabis sativa HOM05D007814 ORTHO05D009902 4.8e-112 408.7 320 65.3
Cpa.g.sc8.150 Carica papaya HOM05D007814 ORTHO05D009902 1.1e-111 407.5 376 59.0
FAN15G0488 Fragaria x ananassa HOM05D007814 ORTHO05D009902 1.8e-111 406.8 310 66.5
Gohir.A08G047100 Gossypium hirsutum HOM05D007814 ORTHO05D009902 2.4e-111 406.4 277 71.5
Thecc.01G225000 Theobroma cacao HOM05D007814 ORTHO05D009902 3.1e-111 406.0 339 62.2
vmacro14751 Vaccinium macrocarpon HOM05D007814 ORTHO05D009902 6.9e-111 404.8 377 57.6
Lalb_Chr19g0125641 Lupinus albus HOM05D007814 ORTHO05D009902 9.0e-111 404.4 376 60.9
TAR362G0330 Trochodendron aralioides HOM05D007814 ORTHO05D009902 1.5e-110 403.7 307 67.1
Duzib138G0957 Durio zibethinus HOM05D007814 ORTHO05D009902 2.0e-110 403.3 355 59.7
FAN27G1054 Fragaria x ananassa HOM05D007814 ORTHO05D009902 1.3e-109 400.6 310 66.1
Psat3g145840 Pisum sativum HOM05D007814 ORTHO05D009902 1.3e-109 400.6 321 64.5
MD05G1174800 Malus domestica HOM05D007814 ORTHO05D009902 2.2e-109 399.8 370 57.8
Potri.002G242800 Populus trichocarpa HOM05D007814 ORTHO05D009902 8.5e-109 397.9 362 58.8
AUR62008915 Chenopodium quinoa HOM05D007814 ORTHO05D009902 1.1e-108 397.5 388 59.5
Sc05g0002160 Simmondsia chinensis HOM05D007814 ORTHO05D009902 1.4e-108 397.1 277 70.4
Cc01_g16980 Coffea canephora HOM05D007814 ORTHO05D009902 1.9e-108 396.7 310 67.1
HanXRQChr04g0108161 Helianthus annuus HOM05D007814 ORTHO05D009902 1.9e-108 396.7 336 62.8
PSO063G1792 Papaver somniferum HOM05D007814 ORTHO05D009902 1.9e-108 396.7 290 66.2
PSO017G6744 Papaver somniferum HOM05D007814 ORTHO05D009902 3.2e-108 396.0 290 66.6
Lj1g0000473 Lotus japonicus HOM05D007814 ORTHO05D009902 4.2e-108 395.6 344 63.1
Nn1g07865 Nelumbo nucifera HOM05D007814 ORTHO05D009902 9.3e-108 394.4 278 71.6
Medtr7g057180 Medicago truncatula HOM05D007814 ORTHO05D009902 2.1e-107 393.3 322 64.6
Ca_05138_v3 Cicer arietinum L. HOM05D007814 ORTHO05D009902 3.6e-107 392.5 273 71.1
Eucgr.H00797 Eucalyptus grandis HOM05D007814 ORTHO05D009902 7.9e-107 391.3 368 59.2
TPR.G9308 Trifolium pratense HOM05D007814 ORTHO05D009902 1.0e-106 391.0 344 61.0
Aqoxy2G03872 Aquilegia oxysepala HOM05D007814 ORTHO05D009902 8.7e-106 387.9 326 62.3
Ciclev10020793m.g Citrus clementina HOM05D007814 ORTHO05D009902 1.5e-102 377.1 317 62.5
CARHR218600 Cardamine hirsuta HOM05D007814 ORTHO05D009902 2.6e-102 376.3 318 62.6
AL9U10890 Arabidopsis lyrata HOM05D007814 ORTHO05D009902 2.9e-101 372.9 337 58.8
Carub.0007s2955 Capsella rubella HOM05D007814 ORTHO05D009902 2.9e-101 372.9 289 64.4
BcaC02g09443 Brassica carinata HOM05D007814 ORTHO05D009902 8.5e-101 371.3 342 59.6
Thhalv10025557m.g Eutrema salsugineum HOM05D007814 ORTHO05D009902 2.5e-100 369.8 346 59.8
C04p42800 Brassica napus HOM05D007814 ORTHO05D009902 4.2e-100 369.0 342 59.4
BolC4t25846H Brassica oleracea HOM05D007814 ORTHO05D009902 4.2e-100 369.0 342 59.4
BraA04t16587Z Brassica rapa HOM05D007814 ORTHO05D009902 1.8e-98 363.6 341 59.2
A04p08910 Brassica napus HOM05D007814 ORTHO05D009902 1.1e-97 360.9 341 58.4
Sp7g10540 Schrenkiella parvula HOM05D007814 ORTHO05D009902 1.1e-97 360.9 344 58.4
ATR1145G089 Amborella trichopoda HOM05D007814 ORTHO05D009902 9.7e-97 357.8 372 50.8
Aa31LG9G4780 Aethionema arabicum HOM05D007814 ORTHO05D009902 1.8e-95 353.6 329 57.1
HPP92_021384 Vanilla planifolia HOM05D007814 ORTHO05D009902 1.3e-93 347.4 361 53.7
PGR083G1478 Punica granatum HOM05D007814 ORTHO05D009902 1.6e-91 340.5 204 79.4
Haze_24806 Corylus avellana HOM05D007814 ORTHO05D009902 4.7e-91 339.0 229 74.7
Actinidia23722 Actinidia chinensis HOM05D007814 ORTHO05D009902 6.1e-91 338.6 198 83.3
Rhsim01G0255600 Rhododendron simsii HOM05D007814 ORTHO05D009902 3.3e-89 332.8 332 53.3
AUR62001089 Chenopodium quinoa HOM05D007814 ORTHO05D009902 9.7e-89 331.3 270 65.2
PGSC0003DMG400017662 Solanum tuberosum HOM05D007814 ORTHO05D009902 1.3e-88 330.9 336 57.1
FAN24G2056 Fragaria x ananassa HOM05D007814 ORTHO05D009902 1.4e-79 300.8 310 54.2
Hund18384 Selenicereus undatus HOM05D007814 ORTHO05D009902 1.6e-78 297.4 328 54.0
RcHm_v2.0_Chr6g0284801 Rosa chinensis HOM05D007814 ORTHO05D009902 1.7e-77 293.9 313 51.8
A05p28990 Brassica napus HOM05D007814 ORTHO05D009902 1.5e-76 290.8 229 65.9
GSVIVG01028673001 Vitis vinifera HOM05D007814 ORTHO05D009902 9.8e-73 278.1 209 64.6
Manes.13G047600 Manihot esculenta HOM05D007814 ORTHO05D009902 5.9e-70 268.9 286 52.4
Pp3c24_19150 Physcomitrium patens HOM05D007814 ORTHO05D009902 1.2e-65 254.6 378 45.0
Mapoly0085s0093 Marchantia polymorpha HOM05D007814 ORTHO05D009902 5.7e-65 252.3 288 51.0
AT4G13150 Arabidopsis thaliana HOM05D007814 ORTHO05D009902 6.3e-64 248.8 156 73.1
DCAR_012647 Daucus carota HOM05D007814 ORTHO05D009902 1.2e-62 244.6 148 77.0
BraA05t21782Z Brassica rapa HOM05D007814 ORTHO05D009902 2.7e-62 243.4 241 56.4
unitig_26.g9442 Utricularia gibba HOM05D001030 ORTHO05D002278 1.7e-45 187.6 210 51.4
CDE05G3049 Ceratophyllum demersum HOM05D007814 ORTHO05D009902 6.6e-45 185.7 207 52.2
TWI36G0737 Tripterygium wilfordii HOM05D007814 ORTHO05D009902 1.4e-42 177.9 224 44.2
SMO351G0286 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 1.0e-37 161.8 131 62.6
SMO119G0517 Selaginella moellendorffii HOM05D007814 ORTHO05D009902 3.0e-37 160.2 131 61.8
GSVIVG01028671001 Vitis vinifera HOM05D007814 ORTHO05D009902 7.1e-23 112.5 68 82.4
PRCOL_00001446 Prasinoderma coloniale HOM05D007814 ORTHO05D009902 3.3e-12 77.0 179 31.3
RcHm_v2.0_Chr6g0284811 Rosa chinensis HOM05D007814 ORTHO05D009902 2.8e-11 73.9 46 78.3
QL02p081848 Quercus lobata HOM05D007814 ORTHO05D009902 4.0e-10 70.1 123 35.8


User provided reference genes

Program Settings