Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G5711 Salvia bowleyana HOM05D002243 ORTHO05D001848 3.8e-280 967.6 523 100.0
SalBow6G4432 Salvia bowleyana HOM05D002243 ORTHO05D001848 7.0e-48 196.1 414 41.3
SalBow6G2660 Salvia bowleyana HOM05D002243 ORTHO05D001848 2.0e-47 194.5 404 42.3
MSTRG.20241 Avicennia marina HOM05D002243 ORTHO05D001848 1.0e-46 192.2 432 36.6
MSTRG.27769 Avicennia marina HOM05D002243 ORTHO05D001848 9.4e-45 185.7 424 35.6
MSTRG.16664 Avicennia marina HOM05D002243 ORTHO05D001848 2.6e-34 151.0 414 37.2
Dinv09523 Davidia involucrata HOM05D002243 ORTHO05D001848 3.5e-31 140.6 412 36.2
CSS0029796 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 1.8e-24 118.2 425 34.4
Oeu005723.1 Olea europaea HOM05D002243 ORTHO05D001848 1.6e-23 115.2 375 34.4
CSS0022177 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 7.2e-21 106.3 427 33.3
Lj5P222T65 Lonicera japonica HOM05D002243 ORTHO05D001848 3.0e-19 100.9 347 30.3
Sed0013875 Sechium edule HOM05D002243 ORTHO05D001848 3.0e-19 100.9 439 27.8
Peaxi162Scf00016g03211 Petunia axillaris HOM05D002243 ORTHO05D001848 2.6e-18 97.8 428 25.7
DCAR_021931 Daucus carota HOM05D002243 ORTHO05D001848 7.5e-18 96.3 408 26.0
CiPaw.05G022100 Carya illinoinensis HOM05D002243 ORTHO05D001848 3.7e-17 94.0 445 27.0
CSS0016364 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 1.1e-16 92.4 434 29.5
Sopen01g049010 Solanum pennellii HOM05D002243 ORTHO05D001848 1.4e-16 92.0 72 52.8
PGSC0003DMG400005118 Solanum tuberosum HOM05D002243 ORTHO05D001848 4.1e-16 90.5 72 54.2
CiPaw.06G162700 Carya illinoinensis HOM05D002243 ORTHO05D001848 7.0e-16 89.7 272 31.6
Migut.B00490 Erythranthe guttata HOM05D002243 ORTHO05D001848 2.3e-14 84.7 241 32.0
TAR381G0567 Trochodendron aralioides HOM05D002243 ORTHO05D001848 2.9e-14 84.3 438 28.5
GSVIVG01037020001 Vitis vinifera HOM05D002243 ORTHO05D001848 8.6e-14 82.8 70 54.3
Gohir.D02G234800 Gossypium hirsutum HOM05D002243 ORTHO05D001848 1.5e-13 82.0 77 45.5
Manes.07G051400 Manihot esculenta HOM05D002243 ORTHO05D001848 1.9e-13 81.6 117 38.5
Solyc01g106680.4 Solanum lycopersicum HOM05D002243 ORTHO05D001848 2.5e-13 81.3 465 26.0
AUR62030879 Chenopodium quinoa HOM05D002243 ORTHO05D001848 5.6e-13 80.1 77 46.8
Oeu010475.1 Olea europaea HOM05D002243 ORTHO05D001848 5.6e-13 80.1 483 26.7
Ah.01g024500 Amaranthus hybridus HOM05D002243 ORTHO05D001848 1.6e-12 78.6 77 45.5
Medtr5g005430 Medicago truncatula HOM05D002243 ORTHO05D001848 2.1e-12 78.2 84 44.0
Duzib132G0349 Durio zibethinus HOM05D002243 ORTHO05D001848 2.8e-12 77.8 72 44.4
COL.COLO4_17804 Corchorus olitorius HOM05D002243 ORTHO05D001848 4.7e-12 77.0 390 26.2
Hund06501 Selenicereus undatus HOM05D002243 ORTHO05D001848 6.1e-12 76.6 89 43.8
Psat6g212880 Pisum sativum HOM05D002243 ORTHO05D001848 8.0e-12 76.3 70 42.9
vmacro22263 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 8.0e-12 76.3 408 28.7
Prupe.8G152300 Prunus persica HOM05D002243 ORTHO05D001848 1.0e-11 75.9 104 42.3
Dinv26979 Davidia involucrata HOM05D002243 ORTHO05D001848 1.4e-11 75.5 84 42.9
Rhsim11G0148900 Rhododendron simsii HOM05D002243 ORTHO05D001848 1.4e-11 75.5 351 30.5
Sabra09G0064600 Salix brachista HOM05D002243 ORTHO05D001848 1.8e-11 75.1 84 41.7
MD10G1112600 Malus domestica HOM05D002243 ORTHO05D001848 2.3e-11 74.7 75 46.7
Peaxi162Scf00152g00066 Petunia axillaris HOM05D002243 ORTHO05D001848 3.1e-11 74.3 425 28.7
Potri.001G288800 Populus trichocarpa HOM05D002243 ORTHO05D001848 3.1e-11 74.3 83 42.2
BcaNung02923 Brassica carinata HOM05D010391 ORTHO05D001848 4.0e-11 73.9 82 45.1
ECA236G0236 Erigeron canadensis HOM05D002243 ORTHO05D001848 5.2e-11 73.6 263 31.6
Sabra16G0180600 Salix brachista HOM05D002243 ORTHO05D001848 5.2e-11 73.6 83 42.2
TAR376G0696 Trochodendron aralioides HOM05D002243 ORTHO05D001848 5.2e-11 73.6 292 32.2
Lalb_Chr09g0329371 Lupinus albus HOM05D002243 ORTHO05D001848 8.9e-11 72.8 167 31.1
GSVIVG01006594001 Vitis vinifera HOM05D002243 ORTHO05D001848 8.9e-11 72.8 79 44.3
Glyma.11G002700 Glycine max HOM05D002243 ORTHO05D001848 1.2e-10 72.4 447 25.7
Aqoxy5G01944 Aquilegia oxysepala HOM05D002243 ORTHO05D001848 2.0e-10 71.6 84 44.0
Ciclev10028128m.g Citrus clementina HOM05D002243 ORTHO05D001848 2.0e-10 71.6 462 25.5
Haze_10330 Corylus avellana HOM05D002243 ORTHO05D001848 2.0e-10 71.6 409 24.4
Glyma.01G241100 Glycine max HOM05D002243 ORTHO05D001848 2.0e-10 71.6 53 58.5
FAN18G0601 Fragaria x ananassa HOM05D002243 ORTHO05D001848 2.6e-10 71.2 78 44.9
HanXRQChr06g0181751 Helianthus annuus HOM05D002243 ORTHO05D001848 2.6e-10 71.2 335 32.2
PSO782G0611 Papaver somniferum HOM05D002243 ORTHO05D001848 2.6e-10 71.2 130 36.2
PSO832G2889 Papaver somniferum HOM05D002243 ORTHO05D001848 2.6e-10 71.2 133 35.3
Actinidia36403 Actinidia chinensis HOM05D002243 ORTHO05D001848 3.4e-10 70.9 84 38.1
MELO3C018032.2 Cucumis melo HOM05D002243 ORTHO05D001848 3.4e-10 70.9 364 30.2
FvH4_5g33410 Fragaria vesca HOM05D002243 ORTHO05D001848 3.4e-10 70.9 78 44.9
MD05G1108600 Malus domestica HOM05D002243 ORTHO05D001848 3.4e-10 70.9 104 40.4
SGA_v2.0_scaffold342G49428 Striga asiatica HOM05D002243 ORTHO05D001848 3.4e-10 70.9 349 31.8
C07p59860 Brassica napus HOM05D010391 ORTHO05D001848 4.4e-10 70.5 72 47.2
Manes.18G052200 Manihot esculenta HOM05D002243 ORTHO05D001848 4.4e-10 70.5 213 31.0
Thecc.02G032300 Theobroma cacao HOM05D002243 ORTHO05D001848 4.4e-10 70.5 342 24.0
BolC7t46430H Brassica oleracea HOM05D010391 ORTHO05D001848 5.8e-10 70.1 72 47.2
Lj9P338T47 Lonicera japonica HOM05D002243 ORTHO05D001848 5.8e-10 70.1 449 27.6
BcaNung04324 Brassica carinata HOM05D010391 ORTHO05D001848 7.5e-10 69.7 75 45.3
Atru.chr3.1086 Acer truncatum HOM05D002243 ORTHO05D001848 1.3e-09 68.9 68 44.1
Hma1.2p1_1953F.1_g308845 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 1.3e-09 68.9 78 41.0
Hma1.2p1_1953F.1_g308850 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 1.3e-09 68.9 78 41.0
Peaxi162Scf00096g00157 Petunia axillaris HOM05D002243 ORTHO05D001848 1.7e-09 68.6 82 41.5
Lj5g0020290 Lotus japonicus HOM05D002243 ORTHO05D001848 2.2e-09 68.2 141 31.9
Phvul.003G231700 Phaseolus vulgaris HOM05D002243 ORTHO05D001848 2.2e-09 68.2 78 39.7
Cfa004723 Carpinus fangiana HOM05D002243 ORTHO05D001848 2.9e-09 67.8 446 23.5
DCAR_025837 Daucus carota HOM05D002243 ORTHO05D001848 2.9e-09 67.8 79 43.0
Thhalv10025138m.g Eutrema salsugineum HOM05D010391 ORTHO05D001848 2.9e-09 67.8 74 48.6
Glyma.20G136900 Glycine max HOM05D002243 ORTHO05D001848 2.9e-09 67.8 424 28.1
Oeu061818.1 Olea europaea HOM05D002243 ORTHO05D001848 2.9e-09 67.8 79 38.0
Potri.007G008600 Populus trichocarpa HOM05D002243 ORTHO05D001848 2.9e-09 67.8 141 40.4
Cfa006795 Carpinus fangiana HOM05D002243 ORTHO05D001848 3.7e-09 67.4 120 35.8
Lj1g0019537 Lotus japonicus HOM05D002243 ORTHO05D001848 3.7e-09 67.4 450 25.1
MD02G1193800 Malus domestica HOM05D002243 ORTHO05D001848 3.7e-09 67.4 82 41.5
Prupe.6G213200 Prunus persica HOM05D002243 ORTHO05D001848 3.7e-09 67.4 151 33.8
Nitab4.5_0000396g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 4.9e-09 67.0 156 30.8
Atru.chr13.906 Acer truncatum HOM05D002243 ORTHO05D001848 6.4e-09 66.6 83 37.3
Dinv01223 Davidia involucrata HOM05D002243 ORTHO05D001848 6.4e-09 66.6 258 28.3
Dinv44914 Davidia involucrata HOM05D002243 ORTHO05D001848 6.4e-09 66.6 336 31.0
CiPaw.07G039400 Carya illinoinensis HOM05D002243 ORTHO05D001848 8.3e-09 66.2 78 42.3
ATR0767G056 Amborella trichopoda HOM05D002243 ORTHO05D001848 1.1e-08 65.9 53 50.9
Haze_21939 Corylus avellana HOM05D002243 ORTHO05D001848 1.1e-08 65.9 363 25.9
FAN24G3407 Fragaria x ananassa HOM05D002243 ORTHO05D001848 1.1e-08 65.9 73 39.7
Gohir.D03G032300 Gossypium hirsutum HOM05D002243 ORTHO05D001848 1.1e-08 65.9 51 54.9
Gorai.003G033900 Gossypium raimondii HOM05D002243 ORTHO05D001848 1.1e-08 65.9 51 54.9
Oeu059798.2 Olea europaea HOM05D002243 ORTHO05D001848 1.1e-08 65.9 104 31.7
Phvul.002G049601 Phaseolus vulgaris HOM05D002243 ORTHO05D001848 1.1e-08 65.9 73 43.8
RcHm_v2.0_Chr7g0232141 Rosa chinensis HOM05D002243 ORTHO05D001848 1.1e-08 65.9 78 42.3
Zm00001eb055870 Zea mays HOM05D034594 ORTHO05D001848 1.1e-08 65.9 183 31.1
CDE04G0825 Ceratophyllum demersum HOM05D002243 ORTHO05D001848 1.4e-08 65.5 59 50.8
Nitab4.5_0007488g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 1.4e-08 65.5 430 25.3
CiPaw.07G201100 Carya illinoinensis HOM05D002243 ORTHO05D001848 1.9e-08 65.1 355 25.6
Duzib264G1092 Durio zibethinus HOM05D002243 ORTHO05D001848 1.9e-08 65.1 82 41.5
CDE07G0845 Ceratophyllum demersum HOM05D001149 ORTHO05D001848 2.4e-08 64.7 90 37.8
ClCG01G017950 Citrullus lanatus HOM05D002243 ORTHO05D001848 2.4e-08 64.7 78 35.9
Cc07_g07600 Coffea canephora HOM05D023692 ORTHO05D001848 2.4e-08 64.7 113 34.5
DCAR_019339 Daucus carota HOM05D002243 ORTHO05D001848 2.4e-08 64.7 154 30.5
Lalb_Chr06g0164961 Lupinus albus HOM05D002243 ORTHO05D001848 2.4e-08 64.7 422 23.2
CAN.G504.9 Capsicum annuum HOM05D002243 ORTHO05D001848 3.2e-08 64.3 451 25.3
FvH4_2g02971 Fragaria vesca HOM05D002243 ORTHO05D001848 3.2e-08 64.3 72 38.9
FAN20G2409 Fragaria x ananassa HOM05D002243 ORTHO05D001848 3.2e-08 64.3 72 38.9
Glyma.05G110000 Glycine max HOM05D002243 ORTHO05D001848 3.2e-08 64.3 115 40.0
unitig_0.g886 Utricularia gibba HOM05D002243 ORTHO05D001848 3.2e-08 64.3 188 29.8
Nn6g35306 Nelumbo nucifera HOM05D009800 ORTHO05D011618 4.1e-08 63.9 50 54.0
unitig_61.g26040 Utricularia gibba HOM05D002243 ORTHO05D001848 4.1e-08 63.9 259 28.6
CAN.G1061.5 Capsicum annuum HOM05D002243 ORTHO05D001848 5.4e-08 63.5 147 31.3
AT2G22795 Arabidopsis thaliana HOM05D002243 ORTHO05D001848 7.0e-08 63.2 79 35.4
CARHR114080 Cardamine hirsuta HOM05D002243 ORTHO05D001848 7.0e-08 63.2 77 35.1
Migut.H00311 Erythranthe guttata HOM05D002243 ORTHO05D001848 7.0e-08 63.2 78 39.7
FAN26G0529 Fragaria x ananassa HOM05D002243 ORTHO05D001848 7.0e-08 63.2 174 29.9
FAN27G0993 Fragaria x ananassa HOM05D002243 ORTHO05D001848 7.0e-08 63.2 72 38.9
Nitab4.5_0006325g0010 Nicotiana tabacum HOM05D002243 ORTHO05D001848 7.0e-08 63.2 145 31.0
MSTRG.2796 Avicennia marina HOM05D002243 ORTHO05D001848 9.2e-08 62.8 78 42.3
CAN.G416.47 Capsicum annuum HOM05D002243 ORTHO05D001848 9.2e-08 62.8 83 37.3
Eucgr.F02202 Eucalyptus grandis HOM05D002243 ORTHO05D001848 9.2e-08 62.8 73 43.8
FvH4_1g18591 Fragaria vesca HOM05D002243 ORTHO05D001848 9.2e-08 62.8 136 33.1
FAN19G3209 Fragaria x ananassa HOM05D002243 ORTHO05D001848 9.2e-08 62.8 136 33.1
QL06p038195 Quercus lobata HOM05D002243 ORTHO05D001848 9.2e-08 62.8 133 29.3
Thecc.01G079600 Theobroma cacao HOM05D002243 ORTHO05D001848 1.2e-07 62.4 129 30.2
Ah.01g007180 Amaranthus hybridus HOM05D002243 ORTHO05D001848 1.6e-07 62.0 443 28.0
QL12p040753 Quercus lobata HOM05D002243 ORTHO05D001848 1.6e-07 62.0 305 27.5
AL4G12330 Arabidopsis lyrata HOM05D002243 ORTHO05D001848 2.0e-07 61.6 146 30.1
Thhalv10000072m.g Eutrema salsugineum HOM05D002243 ORTHO05D001848 2.0e-07 61.6 142 29.6
Sabra07G0006700 Salix brachista HOM05D002243 ORTHO05D001848 2.0e-07 61.6 142 39.4
SGA_v2.0_scaffold269G46251 Striga asiatica HOM05D002243 ORTHO05D001848 2.0e-07 61.6 77 41.6
TWI74G1522 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 2.0e-07 61.6 146 32.9
C08p40260 Brassica napus HOM05D002243 ORTHO05D001848 2.7e-07 61.2 100 32.0
BolC8t51594H Brassica oleracea HOM05D002243 ORTHO05D001848 2.7e-07 61.2 100 32.0
PGSC0003DMG400030665 Solanum tuberosum HOM05D002243 ORTHO05D001848 3.5e-07 60.8 173 31.2
CDE02G1478 Ceratophyllum demersum HOM05D064956 ORTHO05D001848 4.6e-07 60.5 223 27.8
Lj2A425T27 Lonicera japonica HOM05D002243 ORTHO05D001848 4.6e-07 60.5 83 37.3
Carub.0004s0193 Capsella rubella HOM05D002243 ORTHO05D001848 6.0e-07 60.1 131 29.0
Haze_03961 Corylus avellana HOM05D002243 ORTHO05D001848 6.0e-07 60.1 165 30.3
Nitab4.5_0001477g0030 Nicotiana tabacum HOM05D002243 ORTHO05D001848 6.0e-07 60.1 443 22.8
TWI59G0771 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 6.0e-07 60.1 448 27.7
arahy.Tifrunner.gnm1.ann1.XGM7WG Arachis hypogaea HOM05D002243 ORTHO05D001848 7.8e-07 59.7 311 28.0
BcaC07g41022 Brassica carinata HOM05D002243 ORTHO05D001848 7.8e-07 59.7 76 36.8
Ciclev10025075m.g Citrus clementina HOM05D002243 ORTHO05D001848 7.8e-07 59.7 156 28.2
Oeu039769.1 Olea europaea HOM05D002243 ORTHO05D001848 7.8e-07 59.7 139 31.7
Psat4g088240 Pisum sativum HOM05D002243 ORTHO05D001848 7.8e-07 59.7 78 35.9
Sopen02g036460 Solanum pennellii HOM05D002243 ORTHO05D001848 7.8e-07 59.7 83 39.8
SEGI_35164 Sequoiadendron giganteum HOM05D002243 ORTHO05D001848 1.0e-06 59.3 48 50.0
TWI14G1334 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 1.0e-06 59.3 473 27.5
unitig_46.g18837 Utricularia gibba HOM05D002243 ORTHO05D001848 1.0e-06 59.3 458 25.8
MSTRG.23645 Avicennia marina HOM05D002243 ORTHO05D001848 1.3e-06 58.9 78 37.2
CANSAT21G1644 Cannabis sativa HOM05D002243 ORTHO05D001848 1.3e-06 58.9 235 28.5
Glyma.17G086000 Glycine max HOM05D002243 ORTHO05D001848 1.3e-06 58.9 333 29.7
MBI04_g06589_MAGBIO Magnolia biondii HOM05D002243 ORTHO05D001848 1.3e-06 58.9 53 47.2
BraA09t41115Z Brassica rapa HOM05D002243 ORTHO05D001848 1.7e-06 58.5 76 36.8
Manes.05G185500 Manihot esculenta HOM05D002243 ORTHO05D001848 1.7e-06 58.5 215 27.9
Manes.12G119100 Manihot esculenta HOM05D002243 ORTHO05D001848 1.7e-06 58.5 153 39.2
Prupe.1G544100 Prunus persica HOM05D002243 ORTHO05D001848 1.7e-06 58.5 234 29.1
BcaC02g08599 Brassica carinata HOM05D002243 ORTHO05D001848 2.3e-06 58.2 74 35.1
C04p52120 Brassica napus HOM05D002243 ORTHO05D001848 2.3e-06 58.2 74 35.1
BolC4t26786H Brassica oleracea HOM05D002243 ORTHO05D001848 2.3e-06 58.2 74 35.1
Ca_28397_v3 Cicer arietinum L. HOM05D002243 ORTHO05D001848 2.3e-06 58.2 80 35.0
Manes.10G087900 Manihot esculenta HOM05D002243 ORTHO05D001848 2.3e-06 58.2 469 25.4
Nitab4.5_0002415g0010 Nicotiana tabacum HOM05D002243 ORTHO05D001848 2.3e-06 58.2 84 35.7
AT4G37820 Arabidopsis thaliana HOM05D002243 ORTHO05D001848 3.0e-06 57.8 371 26.4
Medtr4g097790 Medicago truncatula HOM05D002243 ORTHO05D001848 3.0e-06 57.8 114 30.7
Sp4g01810 Schrenkiella parvula HOM05D002243 ORTHO05D001848 3.9e-06 57.4 138 29.7
Duzib052G0991 Durio zibethinus HOM05D002243 ORTHO05D001848 5.0e-06 57.0 423 26.0
Eucgr.G01184 Eucalyptus grandis HOM05D002243 ORTHO05D001848 5.0e-06 57.0 357 24.6
SGA_v2.0_scaffold121G33087 Striga asiatica HOM05D002243 ORTHO05D001848 5.0e-06 57.0 77 37.7
Dinv41660 Davidia involucrata HOM05D001922 ORTHO05D001441 6.6e-06 56.6 75 40.0
Lsat_1_v5_gn_6_108800 Lactuca sativa HOM05D002243 ORTHO05D001848 6.6e-06 56.6 60 41.7
Duzib187G1983 Durio zibethinus HOM05D002243 ORTHO05D001848 8.6e-06 56.2 168 32.1
SalBow2G3462 Salvia bowleyana HOM05D002243 ORTHO05D001848 8.6e-06 56.2 84 35.7
THA.LOC104807202 Tarenaya hassleriana HOM05D010391 ORTHO05D001848 8.6e-06 56.2 393 30.3
TPR.G22426 Trifolium pratense HOM05D002243 ORTHO05D001848 8.6e-06 56.2 148 30.4
VMungo0251G3413 Vigna mungo HOM05D002243 ORTHO05D001848 8.6e-06 56.2 172 30.2


User provided reference genes

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