Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G5372 Salvia bowleyana HOM05D004606 ORTHO05D005086 1.2e-112 409.8 204 100.0
SalBow6G2354 Salvia bowleyana HOM05D004606 ORTHO05D005086 2.3e-111 405.6 204 99.0
SalBow4G2310 Salvia bowleyana HOM05D004606 ORTHO05D005086 9.6e-70 267.3 163 83.4
Migut.A00299 Erythranthe guttata HOM05D004606 ORTHO05D005086 1.0e-63 247.3 235 58.3
Oeu031575.3 Olea europaea HOM05D004606 ORTHO05D005086 8.4e-58 227.6 225 53.3
Nn2g11896 Nelumbo nucifera HOM05D004606 ORTHO05D005086 1.0e-55 220.7 223 52.5
Cfa013195 Carpinus fangiana HOM05D004606 ORTHO05D005086 3.9e-55 218.8 234 50.9
Dinv11601 Davidia involucrata HOM05D004606 ORTHO05D005086 8.7e-55 217.6 234 48.7
Oeu045189.1 Olea europaea HOM05D004606 ORTHO05D005086 1.9e-54 216.5 234 50.9
Cc11_g01620 Coffea canephora HOM05D004606 ORTHO05D005086 7.4e-54 214.5 228 50.9
SGA_v2.0_scaffold448G51772 Striga asiatica HOM05D004606 ORTHO05D005086 7.4e-54 214.5 225 53.8
Lj7C716G6 Lonicera japonica HOM05D004606 ORTHO05D005086 9.6e-54 214.2 227 51.1
CSS0047394 Camellia sinensis var. sinensis HOM05D004606 ORTHO05D005086 2.8e-53 212.6 223 50.7
Oeu045188.1 Olea europaea HOM05D004606 ORTHO05D005086 2.8e-53 212.6 237 49.8
QL04p042401 Quercus lobata HOM05D004606 ORTHO05D005086 2.8e-53 212.6 224 49.6
CSS0017380 Camellia sinensis var. sinensis HOM05D004606 ORTHO05D005086 3.7e-53 212.2 223 51.1
QL04p042370 Quercus lobata HOM05D004606 ORTHO05D005086 4.8e-53 211.8 224 49.6
QL04p042484 Quercus lobata HOM05D004606 ORTHO05D005086 6.2e-53 211.5 224 49.1
Oeu045190.1 Olea europaea HOM05D004606 ORTHO05D005086 5.3e-52 208.4 234 50.0
Prupe.1G471700 Prunus persica HOM05D004606 ORTHO05D005086 5.3e-52 208.4 234 47.4
TAR626G1705 Trochodendron aralioides HOM05D004606 ORTHO05D005086 5.3e-52 208.4 227 48.0
Lj5g0014776 Lotus japonicus HOM05D004606 ORTHO05D005086 1.5e-51 206.8 223 49.3
MBI04_g33818_MAGBIO Magnolia biondii HOM05D004606 ORTHO05D005086 1.5e-51 206.8 228 49.1
GSVIVG01035774001 Vitis vinifera HOM05D004606 ORTHO05D005086 1.5e-51 206.8 226 48.7
CsaV3_2G031750 Cucumis sativus L. HOM05D004606 ORTHO05D005086 5.8e-51 204.9 231 46.3
Hma1.2p1_0000F.1_g000990 Hydrangea macrophylla HOM05D004606 ORTHO05D005086 5.8e-51 204.9 229 48.9
Rhsim02G0193100 Rhododendron simsii HOM05D004606 ORTHO05D005086 5.8e-51 204.9 228 49.1
Sed0001356 Sechium edule HOM05D004606 ORTHO05D005086 5.8e-51 204.9 229 46.7
Duzib187G0213 Durio zibethinus HOM05D004606 ORTHO05D005086 1.3e-50 203.8 229 48.9
Ciclev10008268m.g Citrus clementina HOM05D004606 ORTHO05D005086 1.7e-50 203.4 227 46.7
PGR044G0860 Punica granatum HOM05D004606 ORTHO05D005086 2.2e-50 203.0 226 46.5
Gohir.A02G109707 Gossypium hirsutum HOM05D004606 ORTHO05D005086 8.4e-50 201.1 228 46.5
AL6G21980 Arabidopsis lyrata HOM05D004606 ORTHO05D005086 1.1e-49 200.7 228 48.7
MELO3C011226.2 Cucumis melo HOM05D004606 ORTHO05D005086 1.4e-49 200.3 231 45.9
Manes.16G118200 Manihot esculenta HOM05D004606 ORTHO05D005086 1.9e-49 199.9 232 43.1
Lsat_1_v5_gn_1_40980 Lactuca sativa HOM05D004606 ORTHO05D005086 2.5e-49 199.5 228 49.6
PGR044G2107 Punica granatum HOM05D004606 ORTHO05D005086 2.5e-49 199.5 229 45.0
Ca_13137_v3 Cicer arietinum L. HOM05D004606 ORTHO05D005086 3.2e-49 199.1 228 45.2
vmacro11130 Vaccinium macrocarpon HOM05D004606 ORTHO05D005086 4.2e-49 198.7 235 45.5
RcHm_v2.0_Chr6g0298811 Rosa chinensis HOM05D004606 ORTHO05D005086 5.5e-49 198.4 230 45.7
CSS0006183 Camellia sinensis var. sinensis HOM05D004606 ORTHO05D005086 9.3e-49 197.6 228 45.6
Gorai.013G110500 Gossypium raimondii HOM05D004606 ORTHO05D005086 9.3e-49 197.6 228 46.1
CiPaw.07G219400 Carya illinoinensis HOM05D004606 ORTHO05D005086 1.2e-48 197.2 230 47.8
Psat6g030120 Pisum sativum HOM05D004606 ORTHO05D005086 1.2e-48 197.2 230 46.5
TWI63G0154 Tripterygium wilfordii HOM05D004606 ORTHO05D005086 1.2e-48 197.2 226 46.0
PSO017G2258 Papaver somniferum HOM05D004606 ORTHO05D005086 1.6e-48 196.8 227 47.6
PSO170G2975 Papaver somniferum HOM05D004606 ORTHO05D005086 1.6e-48 196.8 227 47.6
ClCG08G013030 Citrullus lanatus HOM05D004606 ORTHO05D005086 2.7e-48 196.1 235 45.5
Glyma.17G206700 Glycine max HOM05D004606 ORTHO05D005086 3.5e-48 195.7 231 47.6
Thecc.09G147400 Theobroma cacao HOM05D004606 ORTHO05D005086 3.5e-48 195.7 228 46.9
CARHR201940 Cardamine hirsuta HOM05D004606 ORTHO05D005086 4.6e-48 195.3 223 47.1
ClCG08G013020 Citrullus lanatus HOM05D004606 ORTHO05D005086 4.6e-48 195.3 235 45.1
Duzib168G1788 Durio zibethinus HOM05D004606 ORTHO05D005086 4.6e-48 195.3 228 47.4
Potri.018G032500 Populus trichocarpa HOM05D004606 ORTHO05D005086 6.0e-48 194.9 228 46.1
AT5G11330 Arabidopsis thaliana HOM05D004606 ORTHO05D005086 1.3e-47 193.7 223 48.0
FvH4_2g29790 Fragaria vesca HOM05D004606 ORTHO05D005086 1.3e-47 193.7 230 46.1
FAN24G2357 Fragaria x ananassa HOM05D004606 ORTHO05D005086 1.3e-47 193.7 230 46.1
Aqoxy7G01977_Aqoxy7G01978 Aquilegia oxysepala HOM05D004606 ORTHO05D005086 1.8e-47 193.4 225 48.9
FAN27G1511 Fragaria x ananassa HOM05D004606 ORTHO05D005086 1.8e-47 193.4 216 47.7
arahy.Tifrunner.gnm1.ann1.K28DE3 Arachis hypogaea HOM05D004606 ORTHO05D005086 2.3e-47 193.0 230 46.1
FAN15G1610 Fragaria x ananassa HOM05D004606 ORTHO05D005086 2.3e-47 193.0 230 45.2
MD08G1141800 Malus domestica HOM05D004606 ORTHO05D005086 2.3e-47 193.0 228 43.0
Medtr1g011690 Medicago truncatula HOM05D004606 ORTHO05D005086 2.3e-47 193.0 229 46.7
Carub.0006s0979 Capsella rubella HOM05D004606 ORTHO05D005086 3.0e-47 192.6 225 45.8
Phvul.001G053700 Phaseolus vulgaris HOM05D004606 ORTHO05D005086 3.9e-47 192.2 228 47.8
Aa31LG3G15860 Aethionema arabicum HOM05D004606 ORTHO05D005086 6.7e-47 191.4 229 45.4
MD15G1118300 Malus domestica HOM05D004606 ORTHO05D005086 8.7e-47 191.0 228 44.3
arahy.Tifrunner.gnm1.ann1.Z34R6V Arachis hypogaea HOM05D004606 ORTHO05D005086 1.1e-46 190.7 222 46.8
Nitab4.5_0002339g0060 Nicotiana tabacum HOM05D004606 ORTHO05D005086 1.1e-46 190.7 223 46.6
Ca_12923_v3 Cicer arietinum L. HOM05D004606 ORTHO05D005086 1.5e-46 190.3 223 46.6
CsaV3_2G031760 Cucumis sativus L. HOM05D004606 ORTHO05D005086 1.5e-46 190.3 235 44.3
Migut.A00296 Erythranthe guttata HOM05D004606 ORTHO05D005086 1.9e-46 189.9 228 44.3
TPR.G15650 Trifolium pratense HOM05D004606 ORTHO05D005086 1.9e-46 189.9 224 46.0
Thhalv10013697m.g Eutrema salsugineum HOM05D004606 ORTHO05D005086 3.3e-46 189.1 223 45.3
Peaxi162Scf00251g01122 Petunia axillaris HOM05D004606 ORTHO05D005086 3.3e-46 189.1 223 45.7
THA.LOC104815034 Tarenaya hassleriana HOM05D004606 ORTHO05D005086 3.3e-46 189.1 228 43.9
VMungo0647G1004 Vigna mungo HOM05D004606 ORTHO05D005086 3.3e-46 189.1 230 46.5
AUR62032354 Chenopodium quinoa HOM05D004606 ORTHO05D005086 4.3e-46 188.7 221 47.1
Migut.A00294 Erythranthe guttata HOM05D004606 ORTHO05D005086 4.3e-46 188.7 223 45.3
Migut.A00298 Erythranthe guttata HOM05D004606 ORTHO05D005086 4.3e-46 188.7 223 45.3
PGSC0003DMG400025535 Solanum tuberosum HOM05D004606 ORTHO05D005086 4.3e-46 188.7 223 45.7
Gohir.D03G064400 Gossypium hirsutum HOM05D004606 ORTHO05D005086 5.7e-46 188.3 211 46.9
Sabra18G0033400 Salix brachista HOM05D004606 ORTHO05D005086 7.4e-46 188.0 223 46.2
Sopen08g021410 Solanum pennellii HOM05D004606 ORTHO05D005086 7.4e-46 188.0 223 45.7
EL10Ac2g02564 Beta vulgaris HOM05D004606 ORTHO05D005086 9.6e-46 187.6 228 44.3
Phvul.001G053900 Phaseolus vulgaris HOM05D004606 ORTHO05D005086 9.6e-46 187.6 233 45.5
Solyc08g067470.3 Solanum lycopersicum HOM05D004606 ORTHO05D005086 9.6e-46 187.6 223 45.3
Nitab4.5_0000508g0210 Nicotiana tabacum HOM05D004606 ORTHO05D005086 1.6e-45 186.8 223 45.3
Migut.A00292 Erythranthe guttata HOM05D004606 ORTHO05D005086 2.8e-45 186.0 228 44.7
Lalb_Chr22g0361571 Lupinus albus HOM05D004606 ORTHO05D005086 2.8e-45 186.0 233 42.9
A10p26400 Brassica napus HOM05D004606 ORTHO05D005086 3.7e-45 185.7 223 44.8
BraA10t44697Z Brassica rapa HOM05D004606 ORTHO05D005086 8.2e-45 184.5 221 44.8
Migut.A00297 Erythranthe guttata HOM05D004606 ORTHO05D005086 1.8e-44 183.3 222 46.4
Migut.A00293 Erythranthe guttata HOM05D004606 ORTHO05D005086 2.4e-44 183.0 222 46.4
C09p65540 Brassica napus HOM05D004606 ORTHO05D005086 6.9e-44 181.4 223 44.4
Ciclev10010709m.g Citrus clementina HOM05D004606 ORTHO05D005086 6.9e-44 181.4 234 41.9
BolC9t59377H Brassica oleracea HOM05D004606 ORTHO05D005086 9.0e-44 181.0 223 44.4
BcaC04g19239 Brassica carinata HOM05D004606 ORTHO05D005086 2.6e-43 179.5 223 43.9
Ciclev10008396m.g Citrus clementina HOM05D004606 ORTHO05D005086 2.6e-43 179.5 229 41.9
MELO3C011227.2 Cucumis melo HOM05D004606 ORTHO05D005086 4.5e-43 178.7 235 43.8
Ciclev10008384m.g Citrus clementina HOM05D004606 ORTHO05D005086 5.9e-43 178.3 229 41.5
Ciclev10008369m.g Citrus clementina HOM05D004606 ORTHO05D005086 7.6e-43 177.9 229 42.4
Sp6g32250 Schrenkiella parvula HOM05D004606 ORTHO05D005086 7.6e-43 177.9 223 44.4
BcaB08g37070 Brassica carinata HOM05D004606 ORTHO05D005086 1.3e-42 177.2 224 44.6
Ciclev10008398m.g Citrus clementina HOM05D004606 ORTHO05D005086 2.9e-42 176.0 229 41.0
COL.COLO4_24006 Corchorus olitorius HOM05D004606 ORTHO05D005086 3.8e-42 175.6 163 55.8
COL.COLO4_24007 Corchorus olitorius HOM05D004606 ORTHO05D005086 1.9e-41 173.3 196 45.9
Haze_21597 Corylus avellana HOM05D004606 ORTHO05D005086 2.5e-41 172.9 162 56.8
Eucgr.C02826 Eucalyptus grandis HOM05D004606 ORTHO05D005086 3.2e-41 172.6 216 44.9
Ciclev10010301m.g Citrus clementina HOM05D004606 ORTHO05D005086 9.3e-41 171.0 227 41.4
Ciclev10010634m.g Citrus clementina HOM05D004606 ORTHO05D005086 6.1e-40 168.3 241 38.6
Eucgr.C02825 Eucalyptus grandis HOM05D004606 ORTHO05D005086 5.1e-39 165.2 228 41.7
Eucgr.C02822 Eucalyptus grandis HOM05D004606 ORTHO05D005086 8.7e-39 164.5 227 41.4
Eucgr.C02820 Eucalyptus grandis HOM05D004606 ORTHO05D005086 4.3e-38 162.2 232 40.9
Eucgr.L01635 Eucalyptus grandis HOM05D004606 ORTHO05D005086 1.6e-37 160.2 227 41.0
Eucgr.L02556 Eucalyptus grandis HOM05D004606 ORTHO05D005086 8.2e-37 157.9 231 39.8
Ciclev10008450m.g Citrus clementina HOM05D004606 ORTHO05D005086 3.1e-36 156.0 229 40.2
Eucgr.C02823 Eucalyptus grandis HOM05D004606 ORTHO05D005086 3.1e-36 156.0 227 40.1
PGR044G1635 Punica granatum HOM05D004606 ORTHO05D005086 5.3e-36 155.2 226 40.3
ATR0051G060 Amborella trichopoda HOM05D004606 ORTHO05D005086 1.5e-35 153.7 221 41.2
PGR044G1641 Punica granatum HOM05D004606 ORTHO05D005086 1.5e-35 153.7 224 40.6
Sc09g0008700 Simmondsia chinensis HOM05D004606 ORTHO05D005086 7.7e-35 151.4 230 40.0
Medtr1g011700 Medicago truncatula HOM05D004606 ORTHO05D005086 1.1e-33 147.5 220 40.9
Glyma.14G127200 Glycine max HOM05D004606 ORTHO05D005086 2.5e-33 146.4 218 40.8
Ciclev10010356m.g Citrus clementina HOM05D004606 ORTHO05D005086 4.2e-33 145.6 202 41.1
Ciclev10010533m.g Citrus clementina HOM05D004606 ORTHO05D005086 2.1e-32 143.3 204 41.7
ECA233G1913 Erigeron canadensis HOM05D004606 ORTHO05D005086 3.6e-32 142.5 181 45.3
Eucgr.C02829 Eucalyptus grandis HOM05D004606 ORTHO05D005086 5.1e-31 138.7 181 43.6
Atru.chr7.2235 Acer truncatum HOM05D004606 ORTHO05D005086 2.8e-29 132.9 200 40.5
Eucgr.L01636 Eucalyptus grandis HOM05D004606 ORTHO05D005086 2.8e-29 132.9 231 36.4
SEGI_39416 Sequoiadendron giganteum HOM05D004606 ORTHO05D005086 8.2e-29 131.3 231 37.7
SEGI_00162 Sequoiadendron giganteum HOM05D004606 ORTHO05D005086 1.1e-28 131.0 227 38.8
Zm00001eb385840 Zea mays HOM05D004606 ORTHO05D005086 8.5e-26 121.3 224 34.8
Os06g0597600 Oryza sativa ssp. japonica HOM05D004606 ORTHO05D005086 1.9e-25 120.2 227 34.8
Ciclev10010790m.g Citrus clementina HOM05D004606 ORTHO05D005086 7.2e-25 118.2 198 37.9
TAR626G0087 Trochodendron aralioides HOM05D004606 ORTHO05D005086 3.6e-24 115.9 168 39.3
AUR62041849 Chenopodium quinoa HOM05D004606 ORTHO05D005086 5.2e-23 112.1 133 43.6
CAN.G98.22 Capsicum annuum HOM05D004606 ORTHO05D005086 1.7e-21 107.1 146 42.5
Pp3c18_1340 Physcomitrium patens HOM05D004606 ORTHO05D005086 2.4e-20 103.2 228 31.1
Potri.006G248800 Populus trichocarpa HOM05D004606 ORTHO05D005086 1.2e-19 100.9 155 36.1
MD15G1335000 Malus domestica HOM05D004606 ORTHO05D005086 2.6e-19 99.8 139 36.7
Cc11_g01610 Coffea canephora HOM05D004606 ORTHO05D005086 1.0e-18 97.8 81 60.5
Ciclev10010537m.g Citrus clementina HOM05D004606 ORTHO05D005086 1.1e-17 94.4 228 31.1
CAN.G211.3 Capsicum annuum HOM05D004606 ORTHO05D005086 1.9e-17 93.6 176 32.4
Mapoly0132s0019 Marchantia polymorpha HOM05D004606 ORTHO05D005086 2.1e-16 90.1 226 30.1
TPR.G15652 Trifolium pratense HOM05D004606 ORTHO05D005086 4.5e-11 72.4 194 29.9
Atru.chr7.2355 Acer truncatum HOM05D004606 ORTHO05D005086 9.4e-09 64.7 192 25.5
AagrBONN_evm.TU.Sc2ySwM_368.1911 Anthoceros agrestis HOM05D004606 ORTHO05D005086 2.3e-07 60.1 198 29.3


User provided reference genes

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