Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 1.2e-197 693.0 353 100.0
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 3.8e-167 591.7 356 81.7
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 7.2e-166 587.4 355 82.5
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 1.0e-164 583.6 355 83.9
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 1.2e-163 580.1 353 79.9
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 1.7e-162 576.2 357 81.5
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 8.6e-159 563.9 353 76.8
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 1.9e-158 562.8 364 74.5
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 3.3e-158 562.0 357 76.2
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.2e-157 560.1 353 75.6
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 8.0e-157 557.4 353 74.5
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.5e-155 553.1 355 74.4
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 2.6e-155 552.4 353 74.2
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 4.4e-155 551.6 355 74.6
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 5.7e-155 551.2 353 73.7
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 2.2e-154 549.3 355 74.6
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 1.8e-153 546.2 353 76.8
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 7.0e-153 544.3 354 74.9
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 2.7e-152 542.3 353 73.7
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 7.8e-152 540.8 353 73.4
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.5e-150 536.6 353 72.5
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 1.9e-150 536.2 353 72.2
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 2.5e-150 535.8 353 72.5
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 3.3e-150 535.4 353 74.2
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 9.5e-150 533.9 355 72.1
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 9.5e-150 533.9 353 73.1
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 1.2e-149 533.5 362 71.0
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 1.6e-149 533.1 359 71.6
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 2.1e-149 532.7 353 74.5
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 2.8e-149 532.3 360 70.3
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.8e-149 532.3 353 72.5
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 3.6e-149 531.9 354 72.0
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 3.6e-149 531.9 353 72.0
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 4.7e-149 531.6 353 72.2
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 6.2e-149 531.2 363 70.2
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.2e-149 531.2 355 71.8
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 6.2e-149 531.2 355 71.8
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 1.8e-148 529.6 353 71.4
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 1.8e-148 529.6 353 73.7
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 2.3e-148 529.3 353 73.7
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 2.3e-148 529.3 358 71.8
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 1.2e-147 526.9 354 72.0
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 1.5e-147 526.6 355 71.8
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 2.6e-147 525.8 357 70.9
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 3.4e-147 525.4 353 73.9
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 5.8e-147 524.6 353 70.0
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 7.5e-147 524.2 361 69.0
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 7.5e-147 524.2 353 71.4
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 7.5e-147 524.2 360 71.9
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 9.8e-147 523.9 361 71.2
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 1.3e-146 523.5 353 70.3
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.3e-146 523.5 353 72.5
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.7e-146 523.1 353 69.7
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 2.9e-146 522.3 353 70.5
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 2.9e-146 522.3 355 71.3
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 2.9e-146 522.3 356 70.8
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 3.7e-146 521.9 353 70.0
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 4.9e-146 521.5 361 69.3
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 4.9e-146 521.5 354 71.5
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 6.4e-146 521.2 355 71.0
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 8.3e-146 520.8 353 70.8
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 1.1e-145 520.4 353 70.8
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 1.1e-145 520.4 353 69.1
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.1e-145 520.4 353 69.1
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 1.1e-145 520.4 359 69.6
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 1.9e-145 519.6 354 70.3
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 2.4e-145 519.2 360 68.3
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 4.1e-145 518.5 358 70.1
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 9.2e-145 517.3 355 71.8
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 1.2e-144 516.9 347 72.3
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.6e-144 516.5 353 69.7
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.0e-144 516.2 355 69.6
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 3.5e-144 515.4 354 69.2
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 4.6e-144 515.0 353 72.2
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 4.6e-144 515.0 355 70.7
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 4.6e-144 515.0 339 74.3
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 6.0e-144 514.6 358 69.3
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.7e-143 513.1 356 68.5
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.3e-143 512.7 353 69.7
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 3.0e-143 512.3 353 70.5
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 3.0e-143 512.3 353 70.5
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 3.0e-143 512.3 365 70.1
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 5.0e-143 511.5 353 69.7
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 1.1e-142 510.4 356 70.5
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.1e-142 510.4 353 69.4
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.1e-142 510.4 349 71.6
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 1.5e-142 510.0 358 70.9
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 1.9e-142 509.6 357 70.0
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 2.5e-142 509.2 363 69.4
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 3.3e-142 508.8 396 63.6
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.6e-142 508.1 353 68.3
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 7.3e-142 507.7 353 70.0
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 7.3e-142 507.7 353 69.7
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 3.6e-141 505.4 355 67.6
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.2e-141 504.6 360 66.9
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 8.1e-141 504.2 356 70.5
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 1.8e-140 503.1 354 69.2
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 2.3e-140 502.7 353 66.9
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 2.3e-140 502.7 353 69.4
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 1.2e-139 500.4 361 68.1
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 1.5e-139 500.0 356 69.1
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 2.0e-139 499.6 355 67.6
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 2.6e-139 499.2 360 68.1
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 2.6e-139 499.2 358 69.6
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.8e-139 498.0 360 68.1
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 2.2e-138 496.1 355 68.7
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 2.9e-138 495.7 353 66.0
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 4.9e-138 495.0 353 66.6
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.1e-137 493.8 353 65.7
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 1.9e-137 493.0 355 65.9
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 4.1e-137 491.9 354 68.6
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 3.5e-136 488.8 353 66.0
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 4.6e-136 488.4 358 65.1
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 5.1e-135 485.0 354 65.5
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.1e-134 483.8 353 67.1
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 2.5e-134 482.6 353 68.0
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 7.3e-134 481.1 354 65.8
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 2.8e-133 479.2 338 68.3
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 1.8e-132 476.5 353 66.3
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 2.0e-131 473.0 354 63.6
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 5.8e-131 471.5 359 65.5
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 9.9e-131 470.7 364 62.9
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.6e-128 463.4 361 62.0
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 8.6e-127 457.6 356 62.4
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 1.2e-123 447.2 353 59.5
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 1.7e-122 443.4 353 61.8
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.4e-121 439.5 353 58.4
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 3.5e-120 435.6 302 70.2
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 4.6e-120 435.3 354 58.5
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 6.0e-120 434.9 353 57.5
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.4e-116 422.9 290 69.3
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 2.1e-109 399.8 354 60.5
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 2.8e-109 399.4 296 67.2
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.5e-102 377.1 276 68.8
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 2.4e-100 369.8 296 61.8
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 4.0e-100 369.0 353 55.5
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.2e-99 367.5 327 57.5
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 4.4e-78 295.8 213 71.8
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 7.9e-72 275.0 354 41.8
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 1.1e-70 271.2 244 59.0
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 9.1e-68 261.5 273 50.5
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 4.0e-63 246.1 358 39.9
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 4.1e-60 236.1 175 69.1
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 7.0e-60 235.3 156 67.9
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 6.1e-56 222.2 356 37.1
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 6.8e-55 218.8 115 87.0
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.4e-52 209.1 126 77.8
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 7.0e-52 208.8 134 73.1
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.0e-34 151.8 197 41.1
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.4e-31 141.4 85 70.6
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 1.4e-31 141.4 133 62.4
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.1e-31 140.2 85 70.6
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.8e-31 139.0 85 69.4
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.7e-29 133.3 85 67.1
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 8.3e-29 132.1 139 46.0
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 1.2e-27 128.3 188 38.3
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 7.8e-27 125.6 106 60.4
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 4.3e-25 119.8 190 40.0
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 1.5e-22 111.3 59 88.1
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 1.5e-22 111.3 59 88.1
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.0e-22 110.9 58 87.9
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 2.6e-22 110.5 63 82.5
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.7e-19 100.5 61 75.4
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 1.7e-18 97.8 73 69.9
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 1.9e-17 94.4 76 63.2
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 4.3e-17 93.2 55 76.4
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 5.6e-17 92.8 75 57.3
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 2.8e-16 90.5 139 32.4
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.8e-15 87.8 59 67.8
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.4e-14 83.2 80 50.0
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.1e-12 78.6 39 79.5
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 1.1e-12 78.6 174 34.5
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 1.4e-12 78.2 49 69.4
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 2.7e-11 73.9 83 50.6
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 1.3e-10 71.6 149 29.5
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.7e-10 71.2 50 64.0
Sopen02g001110 Solanum pennellii HOM05D003641 ORTHO05D004915 5.1e-10 69.7 98 44.9
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 8.7e-10 68.9 64 45.3
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 2.1e-08 64.3 87 43.7
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 9.0e-07 58.9 164 26.2


User provided reference genes

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