Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 0.0e+00 1692.2 841 100.0
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 0.0e+00 1176.4 854 70.8
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 0.0e+00 1159.1 840 70.8
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 0.0e+00 1135.6 848 68.4
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.5e-294 1016.1 838 59.8
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 1.2e-288 996.5 842 59.4
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 1.4e-287 993.0 842 58.6
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 2.0e-286 989.2 841 58.7
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 5.7e-286 987.6 844 58.4
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 2.8e-280 968.8 851 58.5
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 3.4e-278 961.8 842 56.2
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 3.1e-276 955.3 848 57.0
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 5.9e-275 951.0 843 57.1
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.0e-267 926.0 847 56.7
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 4.4e-262 908.3 886 55.5
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 1.2e-259 900.2 853 53.2
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 1.2e-259 900.2 850 53.6
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 1.7e-258 896.3 859 53.1
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 6.6e-258 894.4 847 55.3
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 4.7e-256 888.3 847 53.8
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.7e-253 878.6 859 53.9
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 6.4e-253 877.9 848 53.2
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 1.1e-252 877.1 846 53.5
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 2.4e-252 875.9 868 52.5
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 1.0e-250 870.5 860 52.9
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 3.0e-250 869.0 853 52.1
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 5.1e-250 868.2 852 51.6
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 2.5e-249 865.9 899 51.1
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.1e-248 862.8 852 51.4
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 2.1e-248 862.8 854 52.1
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 3.1e-247 859.0 849 51.4
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 3.4e-246 855.5 862 52.3
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 3.8e-245 852.0 849 52.4
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 4.9e-245 851.7 845 51.5
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 6.4e-245 851.3 905 49.7
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 8.4e-245 850.9 847 52.9
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 3.2e-244 849.0 853 51.1
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 4.6e-243 845.1 848 52.5
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 7.8e-243 844.3 860 51.6
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 1.0e-242 844.0 844 52.3
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.3e-242 843.6 847 52.4
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 3.9e-242 842.0 847 52.4
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 3.9e-242 842.0 850 51.8
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 5.1e-242 841.6 845 52.4
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 5.1e-242 841.6 845 52.5
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 8.7e-242 840.9 848 52.9
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 1.9e-241 839.7 692 60.3
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 4.3e-241 838.6 847 50.9
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.7e-240 835.1 845 52.2
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.8e-239 833.2 845 52.3
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 9.0e-239 830.9 853 51.5
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 2.0e-238 829.7 850 51.6
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 2.9e-237 825.9 860 51.5
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 6.4e-237 824.7 855 51.5
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 9.3e-236 820.8 846 50.2
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 4.6e-235 818.5 851 50.8
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 9.6e-233 810.8 866 49.8
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 1.3e-232 810.4 847 49.6
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 1.6e-232 810.1 865 49.5
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 1.6e-232 810.1 853 49.5
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 6.2e-232 808.1 862 50.5
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 6.2e-232 808.1 848 49.3
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 6.9e-223 778.1 844 49.2
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 2.6e-222 776.2 691 57.2
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 4.5e-222 775.4 855 48.0
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 2.9e-221 772.7 853 47.0
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 2.9e-221 772.7 852 49.1
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 8.4e-221 771.2 851 47.1
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 4.2e-220 768.8 847 47.5
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 7.1e-220 768.1 847 48.3
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 6.0e-219 765.0 857 48.2
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 8.7e-218 761.1 800 50.8
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 7.4e-217 758.1 852 46.8
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 9.6e-217 757.7 844 47.0
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 2.1e-216 756.5 844 47.0
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 2.1e-216 756.5 851 47.1
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 6.2e-216 755.0 853 47.0
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 1.2e-214 750.7 848 46.1
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 1.9e-209 733.4 847 46.2
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 3.7e-208 729.2 842 46.4
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 3.7e-208 729.2 855 47.4
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 3.1e-207 726.1 857 46.2
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 6.5e-205 718.4 818 46.5
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 8.8e-202 708.0 847 46.8
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 1.5e-201 707.2 847 46.8
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 9.7e-201 704.5 860 45.2
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 6.9e-199 698.4 840 46.4
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 1.5e-193 680.6 840 44.5
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 6.3e-184 648.7 836 43.5
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 2.5e-180 636.7 722 47.1
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 1.2e-177 627.9 640 52.0
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 2.3e-165 587.0 702 46.4
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 5.4e-159 565.8 839 41.2
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 1.7e-157 560.8 864 38.5
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 3.2e-151 540.0 657 45.8
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 4.3e-140 503.1 836 37.7
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 3.6e-123 446.8 846 35.8
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 2.1e-94 351.3 918 31.2
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 6.5e-88 329.7 254 60.2
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 1.0e-85 322.4 414 44.4
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 3.6e-78 297.4 351 46.7
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 1.4e-74 285.4 888 27.7
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 2.4e-74 284.6 341 46.0
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 2.9e-72 277.7 341 44.6
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 1.9e-71 275.0 237 59.5
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.3e-69 268.1 308 48.1
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 1.3e-67 262.3 237 54.9
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 9.1e-50 203.0 194 53.1
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 4.2e-47 194.1 142 64.8
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 1.4e-45 189.1 223 45.3
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 4.4e-44 184.1 207 46.4
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 2.9e-40 171.4 1006 23.1
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 9.5e-39 166.4 162 50.0
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 1.1e-34 152.9 252 37.3
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 3.4e-20 104.8 115 46.1
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 3.4e-20 104.8 143 43.4
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 4.1e-18 97.8 170 35.3
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 1.8e-13 82.4 68 51.5
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 2.4e-10 72.0 142 33.1
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 3.2e-10 71.6 58 58.6


User provided reference genes

Program Settings