Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4669 Salvia bowleyana HOM05D000125 ORTHO05D000120 5.2e-74 280.8 126 100.0
SalBow2G1034 Salvia bowleyana HOM05D000125 ORTHO05D000120 1.3e-16 90.1 106 46.2
Lj2C375T1 Lonicera japonica HOM05D000125 ORTHO05D000120 1.1e-10 70.5 84 45.2
Lj1A359T19 Lonicera japonica HOM05D000125 ORTHO05D000120 4.5e-09 65.1 101 39.6
Lj1A248G20 Lonicera japonica HOM05D000125 ORTHO05D000807 5.8e-09 64.7 84 38.1
SalBow2G2077 Salvia bowleyana HOM05D000125 ORTHO05D000120 1.3e-08 63.5 99 37.4
Lj1A249T14 Lonicera japonica HOM05D000125 ORTHO05D000120 1.7e-08 63.2 85 40.0
CiPaw.13G148300 Carya illinoinensis HOM05D000125 ORTHO05D000120 6.4e-08 61.2 85 38.8
Gorai.011G244000 Gossypium raimondii HOM05D000125 ORTHO05D000120 6.4e-08 61.2 87 35.6
Lj2A376T20 Lonicera japonica HOM05D000125 ORTHO05D000807 6.4e-08 61.2 87 41.4
Lj2A872T10 Lonicera japonica HOM05D000125 ORTHO05D000807 8.4e-08 60.8 91 38.5
Cc08_g04790 Coffea canephora HOM05D000125 ORTHO05D000120 1.1e-07 60.5 109 34.9
CSS0049072 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 2.4e-07 59.3 103 32.0
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.4e-07 59.3 89 36.0
Duzib106G0662 Durio zibethinus HOM05D000125 ORTHO05D000120 2.4e-07 59.3 72 41.7
Dinv39597 Davidia involucrata HOM05D000125 ORTHO05D000120 3.2e-07 58.9 100 29.0
Prupe.7G074600 Prunus persica HOM05D000125 ORTHO05D000120 3.2e-07 58.9 125 28.0
CSS0007777 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000807 4.2e-07 58.5 112 31.2
CSS0035777 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 7.1e-07 57.8 74 39.2
Gohir.A10G209500 Gossypium hirsutum HOM05D000125 ORTHO05D000120 7.1e-07 57.8 87 34.5
Lj2A865T13 Lonicera japonica HOM05D000125 ORTHO05D000120 7.1e-07 57.8 125 32.0
Lj2C357T13 Lonicera japonica HOM05D000125 ORTHO05D000120 7.1e-07 57.8 94 37.2
Dinv12476 Davidia involucrata HOM05D000125 ORTHO05D000120 9.3e-07 57.4 126 28.6
CSS0049291 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D011744 1.2e-06 57.0 85 34.1
Lj2A866T15 Lonicera japonica HOM05D000125 ORTHO05D000120 1.2e-06 57.0 91 36.3
Lj2A850T4 Lonicera japonica HOM05D000125 ORTHO05D000120 1.6e-06 56.6 91 36.3
Sed0018078 Sechium edule HOM05D000125 ORTHO05D000120 1.6e-06 56.6 88 33.0
Thecc.10G051200 Theobroma cacao HOM05D000125 ORTHO05D000807 1.6e-06 56.6 88 34.1
CSS0004983 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 2.1e-06 56.2 70 37.1
A02p06700 Brassica napus HOM05D000125 ORTHO05D000120 2.7e-06 55.8 90 36.7
CSS0005384 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D011744 2.7e-06 55.8 85 32.9
CSS0030550 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D011744 2.7e-06 55.8 85 34.1
COL.COLO4_38431 Corchorus olitorius HOM05D000125 ORTHO05D000120 2.7e-06 55.8 85 34.1
Duzib212G0494 Durio zibethinus HOM05D000125 ORTHO05D000120 2.7e-06 55.8 88 36.4
Gohir.D10G220550 Gossypium hirsutum HOM05D000125 ORTHO05D000120 2.7e-06 55.8 79 39.2
Gorai.010G202500 Gossypium raimondii HOM05D000125 ORTHO05D000120 2.7e-06 55.8 85 38.8
Gorai.011G248800 Gossypium raimondii HOM05D000125 ORTHO05D000120 2.7e-06 55.8 79 39.2
FAN14G2535 Fragaria x ananassa HOM05D000125 ORTHO05D000120 3.5e-06 55.5 112 36.6
Gohir.D06G173300 Gossypium hirsutum HOM05D000125 ORTHO05D000120 3.5e-06 55.5 85 38.8
C02p12000 Brassica napus HOM05D000125 ORTHO05D000120 7.9e-06 54.3 90 36.7
BraA02t05751Z Brassica rapa HOM05D000125 ORTHO05D000120 7.9e-06 54.3 90 36.7
COL.COLO4_10052 Corchorus olitorius HOM05D000125 ORTHO05D000120 7.9e-06 54.3 64 37.5
Lj2A852T7 Lonicera japonica HOM05D000125 ORTHO05D000120 7.9e-06 54.3 91 35.2


User provided reference genes

Program Settings