Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 2.2e-107 392.5 230 100.0
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 1.4e-77 293.5 230 73.0
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 1.8e-72 276.6 232 74.1
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 2.0e-68 263.1 233 67.8
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 3.3e-66 255.8 232 68.1
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 5.5e-66 255.0 232 67.7
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 9.5e-66 254.2 173 80.3
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 2.1e-65 253.1 175 80.6
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.1e-65 253.1 173 79.8
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 2.8e-65 252.7 173 79.2
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 4.7e-65 251.9 172 81.4
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 6.1e-65 251.5 230 64.8
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 1.4e-64 250.4 230 65.2
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 1.4e-64 250.4 231 67.1
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 1.4e-64 250.4 175 79.4
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 4.0e-64 248.8 173 79.8
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 4.0e-64 248.8 234 65.0
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 5.2e-64 248.4 173 78.0
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 8.9e-64 247.7 235 64.7
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 1.2e-63 247.3 175 77.1
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 2.0e-63 246.5 232 63.8
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 3.4e-63 245.7 236 65.3
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 5.7e-63 245.0 175 78.3
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 7.5e-63 244.6 235 63.0
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 7.5e-63 244.6 175 78.3
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 1.3e-62 243.8 236 63.1
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 2.8e-62 242.7 175 75.4
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 2.8e-62 242.7 173 78.6
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 4.9e-62 241.9 174 77.6
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 6.3e-62 241.5 170 78.2
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 8.3e-62 241.1 176 76.1
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 1.4e-61 240.4 178 77.0
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 2.4e-61 239.6 176 75.6
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 2.4e-61 239.6 228 62.7
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 2.4e-61 239.6 176 76.1
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 2.4e-61 239.6 173 77.5
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 3.1e-61 239.2 173 77.5
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 5.4e-61 238.4 173 77.5
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 5.4e-61 238.4 173 79.2
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 7.0e-61 238.0 175 73.7
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 7.0e-61 238.0 176 76.1
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 9.2e-61 237.7 176 76.7
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 1.2e-60 237.3 176 76.7
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 1.2e-60 237.3 176 75.0
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 1.2e-60 237.3 175 74.3
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.6e-60 236.9 173 77.5
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 1.6e-60 236.9 176 75.6
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 2.0e-60 236.5 177 76.8
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 2.0e-60 236.5 176 74.4
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 2.7e-60 236.1 176 75.0
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 2.7e-60 236.1 176 73.9
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 2.7e-60 236.1 173 75.7
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 3.5e-60 235.7 173 76.9
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 4.5e-60 235.3 174 77.0
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 4.5e-60 235.3 177 76.3
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 7.8e-60 234.6 175 72.6
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 1.7e-59 233.4 174 73.6
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 1.7e-59 233.4 173 75.1
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 1.7e-59 233.4 173 76.9
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 3.9e-59 232.3 172 76.2
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 3.9e-59 232.3 163 79.8
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 6.6e-59 231.5 172 75.0
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 6.6e-59 231.5 171 76.6
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 6.6e-59 231.5 174 75.3
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 6.6e-59 231.5 176 73.9
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 1.5e-58 230.3 175 73.1
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 1.5e-58 230.3 175 73.1
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.5e-58 230.3 174 76.4
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 1.5e-58 230.3 170 76.5
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 1.5e-58 230.3 176 75.0
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 1.5e-58 230.3 175 70.9
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 3.3e-58 229.2 196 67.9
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 5.6e-58 228.4 174 75.9
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 5.6e-58 228.4 173 75.7
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 1.2e-57 227.3 193 68.4
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 1.6e-57 226.9 175 74.3
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 3.6e-57 225.7 165 75.8
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 3.6e-57 225.7 179 71.5
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 3.6e-57 225.7 173 75.1
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 3.6e-57 225.7 176 72.7
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 1.4e-56 223.8 182 69.2
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 2.3e-56 223.0 176 69.9
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 5.2e-56 221.9 184 66.3
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 8.9e-56 221.1 321 47.4
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 2.6e-55 219.5 185 67.6
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 2.6e-55 219.5 171 69.0
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 4.4e-55 218.8 162 76.5
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 4.4e-55 218.8 174 69.5
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 1.7e-54 216.9 178 69.7
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 3.7e-54 215.7 125 88.0
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 1.1e-53 214.2 150 78.7
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 1.1e-53 214.2 234 60.7
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 3.2e-53 212.6 159 77.4
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 9.2e-53 211.1 136 79.4
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 2.0e-52 209.9 123 89.4
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 2.0e-52 209.9 171 67.3
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 3.0e-51 206.1 151 78.1
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 5.6e-50 201.8 254 54.3
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 7.3e-50 201.4 123 82.9
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 9.5e-50 201.1 170 63.5
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.4e-48 197.2 122 83.6
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.4e-48 197.2 122 83.6
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 4.0e-48 195.7 125 80.0
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 2.9e-46 189.5 144 67.4
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 6.4e-46 188.3 183 61.2
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 3.5e-44 182.6 223 48.9
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 7.3e-42 174.9 149 61.7
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 2.8e-41 172.9 143 63.6
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 4.4e-39 165.6 150 62.7
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 7.6e-31 138.3 110 67.3
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 9.9e-31 137.9 168 48.2
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 1.4e-29 134.0 170 51.8
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 3.3e-26 122.9 98 64.3
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 2.1e-25 120.2 120 60.0
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 1.8e-24 117.1 136 47.8
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 2.6e-23 113.2 101 65.3
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 4.4e-23 112.5 66 90.9
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 9.9e-23 111.3 133 44.4
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 3.0e-19 99.8 92 59.8
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 8.7e-19 98.2 71 76.1
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 3.2e-13 79.7 150 40.7


User provided reference genes

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