Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow6G4624 Salvia bowleyana HOM05D002335 ORTHO05D006282 5.9e-206 720.7 380 100.0
Migut.J00924 Erythranthe guttata HOM05D002335 ORTHO05D006282 3.8e-136 488.8 301 86.7
SGA_v2.0_scaffold308G48076 Striga asiatica HOM05D002335 ORTHO05D006282 1.5e-132 476.9 322 80.7
Hma1.2p1_0169F.1_g074510 Hydrangea macrophylla HOM05D002335 ORTHO05D006282 3.1e-130 469.2 361 71.7
Ciclev10008755m.g Citrus clementina HOM05D002335 ORTHO05D006282 2.2e-128 463.0 302 80.5
Cfa002987 Carpinus fangiana HOM05D002335 ORTHO05D006282 2.7e-126 456.1 311 77.2
CiPaw.04G143000 Carya illinoinensis HOM05D002335 ORTHO05D006282 1.3e-125 453.8 301 78.1
FvH4_1g08690 Fragaria vesca HOM05D002335 ORTHO05D006282 5.1e-125 451.8 301 79.1
Gohir.D13G196375 Gossypium hirsutum HOM05D002335 ORTHO05D006282 6.7e-125 451.4 293 80.9
Potri.018G056500 Populus trichocarpa HOM05D002335 ORTHO05D006282 3.3e-124 449.1 356 68.8
Gorai.013G224300 Gossypium raimondii HOM05D002335 ORTHO05D006282 1.6e-123 446.8 294 80.6
Glyma.15G177700 Glycine max HOM05D002335 ORTHO05D006282 1.4e-122 443.7 293 81.2
Gohir.A13G190800 Gossypium hirsutum HOM05D002335 ORTHO05D006282 1.8e-122 443.4 293 79.2
Eucgr.C03263 Eucalyptus grandis HOM05D002335 ORTHO05D006282 4.0e-122 442.2 295 79.0
MSTRG.19458 Avicennia marina HOM05D002335 ORTHO05D006282 2.0e-121 439.9 304 78.3
Peaxi162Scf00928g00036 Petunia axillaris HOM05D002335 ORTHO05D006282 2.6e-121 439.5 293 79.2
Phvul.009G227200 Phaseolus vulgaris HOM05D002335 ORTHO05D006282 1.0e-120 437.6 297 78.8
VMungo1309G0226 Vigna mungo HOM05D002335 ORTHO05D006282 1.0e-120 437.6 293 79.9
Manes.16G095200 Manihot esculenta HOM05D002335 ORTHO05D006282 1.3e-120 437.2 297 79.1
Solyc12g009100.2 Solanum lycopersicum HOM05D002335 ORTHO05D006282 4.9e-120 435.3 337 69.7
Sopen12g004050 Solanum pennellii HOM05D002335 ORTHO05D006282 4.9e-120 435.3 337 70.0
Eucgr.C03328 Eucalyptus grandis HOM05D002335 ORTHO05D006282 8.4e-120 434.5 295 77.6
Hund26035 Selenicereus undatus HOM05D002335 ORTHO05D006282 1.9e-119 433.3 293 77.1
ECA236G4601 Erigeron canadensis HOM05D002335 ORTHO05D006282 2.1e-118 429.9 297 76.1
Dinv25558 Davidia involucrata HOM05D002335 ORTHO05D006282 1.3e-117 427.2 356 68.3
HanXRQChr04g0126011 Helianthus annuus HOM05D002335 ORTHO05D006282 1.3e-117 427.2 298 76.2
ClCG03G015070 Citrullus lanatus HOM05D002335 ORTHO05D006282 1.8e-117 426.8 301 75.1
Sed0016034 Sechium edule HOM05D002335 ORTHO05D006282 1.8e-117 426.8 300 76.0
TPR.G27760 Trifolium pratense HOM05D002335 ORTHO05D006282 1.8e-117 426.8 302 76.2
vmacro06343 Vaccinium macrocarpon HOM05D002335 ORTHO05D006282 3.0e-117 426.0 387 63.3
AUR62028934 Chenopodium quinoa HOM05D002335 ORTHO05D006282 9.7e-116 421.0 356 66.6
Aa31sc133G10 Aethionema arabicum HOM05D002335 ORTHO05D006282 1.3e-115 420.6 299 75.3
Glyma.09G069700 Glycine max HOM05D002335 ORTHO05D006282 2.8e-115 419.5 306 75.8
PSO135G0390 Papaver somniferum HOM05D002335 ORTHO05D006282 3.7e-115 419.1 304 72.4
Lj6g0009960 Lotus japonicus HOM05D002335 ORTHO05D006282 6.3e-115 418.3 293 76.5
PGR044G1875 Punica granatum HOM05D002335 ORTHO05D006282 6.3e-115 418.3 293 77.1
CSS0005090 Camellia sinensis var. sinensis HOM05D002335 ORTHO05D006282 1.1e-114 417.5 367 64.3
Thecc.09G076700 Theobroma cacao HOM05D002335 ORTHO05D006282 2.4e-114 416.4 293 76.1
THA.LOC104815334 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 3.1e-114 416.0 301 74.8
PSO724G0129 Papaver somniferum HOM05D002335 ORTHO05D006282 5.3e-114 415.2 304 71.4
BcaB06g26879 Brassica carinata HOM05D002335 ORTHO05D006282 6.9e-114 414.8 301 74.1
Haze_26014 Corylus avellana HOM05D002335 ORTHO05D006282 6.9e-114 414.8 278 79.9
BolC3t13639H Brassica oleracea HOM05D005537 ORTHO05D006776 1.2e-113 414.1 327 69.1
Dinv42395 Davidia involucrata HOM05D002335 ORTHO05D006282 1.5e-113 413.7 367 66.2
MBI19_g16223_MAGBIO Magnolia biondii HOM05D002335 ORTHO05D006282 2.6e-113 412.9 356 65.4
TWI34G0307 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 2.6e-113 412.9 302 74.5
MD02G1091400 Malus domestica HOM05D002335 ORTHO05D006282 4.5e-113 412.1 303 72.9
Sabra18G0052300 Salix brachista HOM05D002335 ORTHO05D006282 4.5e-113 412.1 435 56.1
A07p06320 Brassica napus HOM05D002335 ORTHO05D006282 1.3e-112 410.6 300 73.3
EL10Ac8g19056 Beta vulgaris HOM05D002335 ORTHO05D006282 1.7e-112 410.2 384 62.2
Lsat_1_v5_gn_8_86481 Lactuca sativa HOM05D002335 ORTHO05D006282 3.8e-112 409.1 294 72.4
BcaC06g35950 Brassica carinata HOM05D002335 ORTHO05D006282 8.5e-112 407.9 300 73.3
C07p09370 Brassica napus HOM05D002335 ORTHO05D006282 8.5e-112 407.9 300 73.3
BolC7t41360H Brassica oleracea HOM05D002335 ORTHO05D006282 8.5e-112 407.9 300 73.3
Duzib187G0696 Durio zibethinus HOM05D002335 ORTHO05D006282 8.5e-112 407.9 307 72.3
Manes.03G040500 Manihot esculenta HOM05D002335 ORTHO05D006282 1.4e-111 407.1 297 75.4
Actinidia29935 Actinidia chinensis HOM05D002335 ORTHO05D006282 2.5e-111 406.4 303 73.9
TAR383G0969 Trochodendron aralioides HOM05D002335 ORTHO05D006282 2.5e-111 406.4 360 64.7
THA.LOC104799620 Tarenaya hassleriana HOM05D002335 ORTHO05D006282 4.2e-111 405.6 301 73.1
Nn8g38636 Nelumbo nucifera HOM05D002335 ORTHO05D006282 5.5e-111 405.2 292 74.3
Nitab4.5_0011754g0010 Nicotiana tabacum HOM05D002335 ORTHO05D006282 9.4e-111 404.4 365 65.2
Thhalv10014003m.g Eutrema salsugineum HOM05D002335 ORTHO05D006282 1.2e-110 404.1 293 73.7
AUR62025250 Chenopodium quinoa HOM05D002335 ORTHO05D006282 1.6e-110 403.7 291 74.9
Cc06_g12190 Coffea canephora HOM05D002335 ORTHO05D006282 1.6e-110 403.7 368 64.4
ATR0598G025 Amborella trichopoda HOM05D002335 ORTHO05D006282 2.1e-110 403.3 294 71.4
BraA07t28424Z Brassica rapa HOM05D002335 ORTHO05D006282 2.1e-110 403.3 316 70.3
AL6G32120 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 3.6e-110 402.5 293 74.4
AT5G20580 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 6.1e-110 401.7 293 74.1
GSVIVG01015081001 Vitis vinifera HOM05D002335 ORTHO05D006282 7.9e-110 401.4 362 64.4
Carub.0006s1891 Capsella rubella HOM05D002335 ORTHO05D006282 1.0e-109 401.0 293 73.4
CARHR192220 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.8e-109 400.2 292 74.0
COL.COLO4_18096 Corchorus olitorius HOM05D002335 ORTHO05D006282 1.8e-109 400.2 305 72.5
Duzib168G0796 Durio zibethinus HOM05D002335 ORTHO05D006282 1.8e-109 400.2 298 73.2
CANSAT56G2952 Cannabis sativa HOM05D002335 ORTHO05D006282 5.1e-109 398.7 307 71.3
FAN26G1551 Fragaria x ananassa HOM05D002335 ORTHO05D006282 6.7e-109 398.3 301 72.1
FAN28G1803 Fragaria x ananassa HOM05D002335 ORTHO05D006282 2.5e-108 396.4 301 71.4
Aqoxy7G04129 Aquilegia oxysepala HOM05D002335 ORTHO05D006282 5.7e-108 395.2 369 62.3
C03p11680 Brassica napus HOM05D002335 ORTHO05D006282 7.4e-108 394.8 292 72.6
BraA03t10325Z Brassica rapa HOM05D002335 ORTHO05D006282 1.7e-107 393.7 292 72.3
Sp6g23900 Schrenkiella parvula HOM05D002335 ORTHO05D006282 1.7e-107 393.7 293 72.4
RcHm_v2.0_Chr2g0095141 Rosa chinensis HOM05D002335 ORTHO05D006282 2.8e-107 392.9 291 73.5
Ca_02205_v3 Cicer arietinum L. HOM05D002335 ORTHO05D006282 6.9e-106 388.3 294 72.8
Sp3g24570 Schrenkiella parvula HOM05D002335 ORTHO05D006282 2.0e-105 386.7 302 70.9
Carub.0003s2712 Capsella rubella HOM05D002335 ORTHO05D006282 5.9e-105 385.2 302 70.5
MD15G1217700 Malus domestica HOM05D002335 ORTHO05D006282 3.8e-104 382.5 273 75.1
AL3G43580 Arabidopsis lyrata HOM05D002335 ORTHO05D006282 5.5e-103 378.6 300 70.7
Psat1g134320 Pisum sativum HOM05D002335 ORTHO05D006282 2.1e-102 376.7 275 74.9
CARHR103630 Cardamine hirsuta HOM05D002335 ORTHO05D006282 1.8e-101 373.6 287 72.1
CsaV3_1G041060 Cucumis sativus L. HOM05D002335 ORTHO05D006282 1.1e-100 370.9 301 68.1
MELO3C015522.2 Cucumis melo HOM05D002335 ORTHO05D006282 1.5e-100 370.5 301 67.8
Medtr2g041690 Medicago truncatula HOM05D002335 ORTHO05D006282 1.5e-100 370.5 307 67.8
HPP92_004364 Vanilla planifolia HOM05D002335 ORTHO05D006282 2.2e-99 366.7 312 63.1
Zm00001eb256890 Zea mays HOM05D002335 ORTHO05D006282 3.7e-99 365.9 291 67.0
QL11p000781 Quercus lobata HOM05D002335 ORTHO05D006282 4.8e-99 365.5 266 74.1
AT2G06005 Arabidopsis thaliana HOM05D002335 ORTHO05D006282 4.1e-98 362.5 277 72.9
Lsat_1_v5_gn_7_35121 Lactuca sativa HOM05D002335 ORTHO05D006692 2.1e-94 350.1 273 70.3
CAN.G1661.12 Capsicum annuum HOM05D002335 ORTHO05D006282 3.6e-94 349.4 342 61.7
Sopen07g021360 Solanum pennellii HOM05D002335 ORTHO05D006282 6.1e-94 348.6 293 66.6
Atru.chr7.1708 Acer truncatum HOM05D002335 ORTHO05D006282 8.0e-94 348.2 243 76.5
SHI23809 Sapria himalayana HOM05D002335 ORTHO05D006282 6.7e-93 345.1 235 77.0
arahy.Tifrunner.gnm1.ann1.UHGN3W Arachis hypogaea HOM05D002335 ORTHO05D006282 8.8e-93 344.7 295 65.4
Prupe.7G198700 Prunus persica HOM05D002335 ORTHO05D006282 8.8e-93 344.7 302 65.2
Nitab4.5_0000073g0170 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.1e-90 337.8 419 52.5
FAN23G1616 Fragaria x ananassa HOM05D002335 ORTHO05D006282 9.1e-90 334.7 243 75.3
Lj7C687T14 Lonicera japonica HOM05D002335 ORTHO05D006282 5.0e-88 328.9 254 72.0
Rhsim03G0227400 Rhododendron simsii HOM05D002335 ORTHO05D005129 2.5e-87 326.6 342 58.8
Sc18g0002560 Simmondsia chinensis HOM05D002335 ORTHO05D006282 5.5e-87 325.5 243 73.3
CDE02G0868 Ceratophyllum demersum HOM05D002335 ORTHO05D006282 6.1e-86 322.0 227 74.4
TWI63G1279 Tripterygium wilfordii HOM05D002335 ORTHO05D006282 7.5e-84 315.1 313 60.4
SEGI_06962 Sequoiadendron giganteum HOM05D002335 ORTHO05D006282 4.8e-83 312.4 301 58.5
Aa31LG1G14100 Aethionema arabicum HOM05D002335 ORTHO05D006282 8.2e-83 311.6 395 50.4
Peaxi162Scf00127g01814 Petunia axillaris HOM05D002335 ORTHO05D006282 5.0e-80 302.4 278 64.4
HPP92_004366 Vanilla planifolia HOM05D002335 ORTHO05D006282 2.1e-78 297.0 312 54.8
Nitab4.5_0009436g0040 Nicotiana tabacum HOM05D002335 ORTHO05D006282 8.8e-77 291.6 373 52.0
Psat3g025000 Pisum sativum HOM05D002335 ORTHO05D006282 5.4e-74 282.3 214 71.5
Cpa.g.sc28.33 Carica papaya HOM05D002335 ORTHO05D006282 1.2e-70 271.2 189 75.7
CAN.G404.48 Capsicum annuum HOM05D002335 ORTHO05D006282 1.5e-68 264.2 239 63.6
DCAR_028335 Daucus carota HOM05D002335 ORTHO05D006282 2.0e-68 263.8 188 74.5
Pp3c22_13730 Physcomitrium patens HOM05D002335 ORTHO05D006282 3.4e-68 263.1 293 51.5
Mapoly0011s0025 Marchantia polymorpha HOM05D002335 ORTHO05D006282 1.8e-66 257.3 276 49.6
Pp3c2_6470 Physcomitrium patens HOM05D002335 ORTHO05D006282 9.2e-58 228.4 290 45.5
Lalb_Chr23g0276381 Lupinus albus HOM05D002335 ORTHO05D006282 2.8e-54 216.9 130 90.8
arahy.Tifrunner.gnm1.ann1.3UYF95 Arachis hypogaea HOM05D002335 ORTHO05D006282 5.8e-52 209.1 151 71.5
SMO358G0254 Selaginella moellendorffii HOM05D002335 ORTHO05D006282 3.7e-51 206.5 204 57.4
Lalb_Chr23g0276371 Lupinus albus HOM05D002335 ORTHO05D006282 1.6e-49 201.1 156 68.6
Lalb_Chr07g0181191 Lupinus albus HOM05D002335 ORTHO05D006282 3.9e-48 196.4 190 57.4
Lalb_Chr07g0181181 Lupinus albus HOM05D002335 ORTHO05D006282 2.8e-46 190.3 171 65.5
Cpa.g.sc28.37 Carica papaya HOM05D002335 ORTHO05D006282 1.9e-34 151.0 97 83.5
Actinidia38482 Actinidia chinensis HOM05D002335 ORTHO05D006282 1.6e-33 147.9 103 76.7
Actinidia38481 Actinidia chinensis HOM05D002335 ORTHO05D006282 3.5e-33 146.7 125 69.6
AagrBONN_evm.TU.Sc2ySwM_344.5493 Anthoceros agrestis HOM05D002335 ORTHO05D006282 3.5e-33 146.7 272 35.3
Nitab4.5_0000343g0210 Nicotiana tabacum HOM05D002335 ORTHO05D006282 4.6e-33 146.4 94 81.9
Nitab4.5_0000343g0220 Nicotiana tabacum HOM05D002335 ORTHO05D006282 1.3e-30 138.3 101 73.3
MD02G1091600 Malus domestica HOM05D002335 ORTHO05D006282 8.1e-30 135.6 100 68.0
Solyc07g041890.1 Solanum lycopersicum HOM05D002335 ORTHO05D006282 3.5e-25 120.2 182 45.1
Ah.14g084930 Amaranthus hybridus HOM05D002335 ORTHO05D006282 1.1e-21 108.6 84 69.0
CBR_g26318 Chara braunii HOM05D002335 ORTHO05D006282 5.3e-21 106.3 224 32.6
Medtr2g041390 Medicago truncatula HOM05D002335 ORTHO05D006282 4.9e-19 99.8 111 55.9
Oeu031390.1 Olea europaea HOM05D002335 ORTHO05D006282 2.4e-18 97.4 50 94.0
Cpa.g.c47777 Carica papaya HOM05D002335 ORTHO05D006282 1.8e-16 91.3 52 90.4
Psat6g064600 Pisum sativum HOM05D004726 ORTHO05D005986 4.8e-14 83.2 53 81.1
PSO210G7126 Papaver somniferum HOM05D002335 ORTHO05D006282 6.9e-13 79.3 57 70.2
PGSC0003DMG400019032 Solanum tuberosum HOM05D002335 ORTHO05D006282 2.0e-12 77.8 52 73.1
SalBow6G3723 Salvia bowleyana HOM05D000375 ORTHO05D000240 5.8e-12 76.3 46 84.8
SalBow8G3237 Salvia bowleyana HOM05D001678 ORTHO05D001698 1.9e-10 71.2 53 69.8
Oeu011491.2 Olea europaea HOM05D002335 ORTHO05D006282 4.2e-10 70.1 66 59.1
CAN.G2458.1 Capsicum annuum HOM05D002335 ORTHO05D006282 7.1e-10 69.3 74 56.8
SalBow2G1849 Salvia bowleyana HOM05D000473 ORTHO05D001433 1.9e-07 61.2 31 90.3
SalBow1G8270 Salvia bowleyana HOM05D001678 ORTHO05D001698 7.4e-07 59.3 50 66.0
FvH4_1g08700 Fragaria vesca HOM05D000069 ORTHO05D021424 4.8e-06 56.6 44 63.6


User provided reference genes

Program Settings